RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 VGFO15240 615 aaPredicted RBP27.89■■■□□ 2.06
PNKP-214ENST00000600573 SPATA31D1Q6ZQQ2 1576 aa27.89■■■□□ 2.06
PNKP-214ENST00000600573 IFT172Q9UG01 1749 aa27.89■■■□□ 2.06
PNKP-214ENST00000600573 ST20-MTHFSA0A0A6YYL1 179 aa27.88■■■□□ 2.05
PNKP-214ENST00000600573 MROH2AA6NES4 1674 aa27.87■■■□□ 2.05
PNKP-214ENST00000600573 FBXO31Q5XUX0 539 aaPredicted RBP27.87■■■□□ 2.05
PNKP-214ENST00000600573 ZFYVE9O95405 1425 aa27.86■■■□□ 2.05
PNKP-214ENST00000600573 SLC24A1O60721 1099 aa27.85■■■□□ 2.05
PNKP-214ENST00000600573 KIF7Q2M1P5 1343 aa27.85■■■□□ 2.05
PNKP-214ENST00000600573 ADGRF5Q8IZF2 1346 aa27.85■■■□□ 2.05
PNKP-214ENST00000600573 C11orf95C9JLR9 678 aaPredicted RBP27.85■■■□□ 2.05
PNKP-214ENST00000600573 PPLO60437 1756 aa27.82■■■□□ 2.04
PNKP-214ENST00000600573 SCAF11Q99590 1463 aaKnown RBP27.81■■■□□ 2.04
PNKP-214ENST00000600573 ANP32CO43423 234 aa27.81■■■□□ 2.04
PNKP-214ENST00000600573 EIF3AQ14152 1382 aaKnown RBP27.8■■■□□ 2.04
PNKP-214ENST00000600573 YTHDC1Q96MU7 727 aaKnown RBP27.8■■■□□ 2.04
PNKP-214ENST00000600573 C14orf93Q9H972 538 aaKnown RBP27.8■■■□□ 2.04
PNKP-214ENST00000600573 TMEM131LA2VDJ0 1609 aa27.8■■■□□ 2.04
PNKP-214ENST00000600573 PIK3C2GO75747 1445 aa27.79■■■□□ 2.04
PNKP-214ENST00000600573 STAG3Q9UJ98 1225 aa27.78■■■□□ 2.04
PNKP-214ENST00000600573 NEXMIFQ5QGS0 1516 aa27.77■■■□□ 2.04
PNKP-214ENST00000600573 CFAP70Q5T0N1 1121 aa27.77■■■□□ 2.04
PNKP-214ENST00000600573 SETBP1Q9Y6X0 1596 aa27.76■■■□□ 2.03
PNKP-214ENST00000600573 TNRQ92752 1358 aa27.73■■■□□ 2.03
PNKP-214ENST00000600573 CCER2I3L3R5 266 aa27.72■■■□□ 2.03
PNKP-214ENST00000600573 TMF1P82094 1093 aa27.72■■■□□ 2.03
PNKP-214ENST00000600573 TESK2Q96S53 571 aa27.72■■■□□ 2.03
PNKP-214ENST00000600573 IQGAP1P46940 1657 aa27.72■■■□□ 2.03
PNKP-214ENST00000600573 HDGFP51858 240 aaKnown RBP27.71■■■□□ 2.03
PNKP-214ENST00000600573 CDCA8Q53HL2 280 aa27.7■■■□□ 2.02
PNKP-214ENST00000600573 A2ML1A8K2U0 1454 aa27.69■■■□□ 2.02
PNKP-214ENST00000600573 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.67■■■□□ 2.02
PNKP-214ENST00000600573 KDM5AP29375 1690 aaKnown RBP27.65■■■□□ 2.02
PNKP-214ENST00000600573 NLRP1Q9C000 1473 aa27.64■■■□□ 2.02
PNKP-214ENST00000600573 ADGRB1O14514 1584 aa27.61■■■□□ 2.01
PNKP-214ENST00000600573 SBNO2Q9Y2G9 1366 aa27.61■■■□□ 2.01
PNKP-214ENST00000600573 POLR3GLQ9BT43 218 aa27.6■■■□□ 2.01
PNKP-214ENST00000600573 RIMS2Q9UQ26 1411 aa27.6■■■□□ 2.01
PNKP-214ENST00000600573 MYO5BQ9ULV0 1848 aa27.58■■■□□ 2.01
PNKP-214ENST00000600573 FER1L4A9Z1Z3 1794 aa27.58■■■□□ 2.01
PNKP-214ENST00000600573 NUTM2DQ5VT03 806 aaPredicted RBP27.56■■■□□ 2
PNKP-214ENST00000600573 DISP3Q9P2K9 1392 aa27.55■■■□□ 2
PNKP-214ENST00000600573 CENPJQ9HC77 1338 aaPredicted RBP27.54■■■□□ 2
PNKP-214ENST00000600573 MYO3AQ8NEV4 1616 aa27.54■■■□□ 2
PNKP-214ENST00000600573 C3P01024 1663 aa27.53■■■□□ 2
PNKP-214ENST00000600573 TMEM2Q9UHN6 1383 aa27.51■■□□□ 1.99
PNKP-214ENST00000600573 TMEM132EQ6IEE7 984 aa27.51■■□□□ 1.99
PNKP-214ENST00000600573 PRKRIP1Q9H875 184 aaPredicted RBP27.51■■□□□ 1.99
PNKP-214ENST00000600573 CEBPAP49715 358 aaPredicted RBP27.5■■□□□ 1.99
PNKP-214ENST00000600573 TRAK1Q9UPV9 953 aa27.5■■□□□ 1.99
PNKP-214ENST00000600573 ADAMTSL3P82987 1691 aa27.5■■□□□ 1.99
PNKP-214ENST00000600573 KTN1Q86UP2 1357 aaKnown RBP27.49■■□□□ 1.99
PNKP-214ENST00000600573 PUS7Q96PZ0 661 aaKnown RBP27.49■■□□□ 1.99
PNKP-214ENST00000600573 ALKQ9UM73 1620 aa27.47■■□□□ 1.99
PNKP-214ENST00000600573 UBR1Q8IWV7 1749 aa27.47■■□□□ 1.99
PNKP-214ENST00000600573 THEMISQ8N1K5 641 aaPredicted RBP27.45■■□□□ 1.98
PNKP-214ENST00000600573 SCAF1Q9H7N4 1312 aaKnown RBP27.42■■□□□ 1.98
PNKP-214ENST00000600573 YTHDC2Q9H6S0 1430 aaKnown RBP27.42■■□□□ 1.98
PNKP-214ENST00000600573 EID1Q9Y6B2 187 aa27.41■■□□□ 1.98
PNKP-214ENST00000600573 RALBP1Q15311 655 aa27.39■■□□□ 1.98
PNKP-214ENST00000600573 ASXL1Q8IXJ9 1541 aa27.39■■□□□ 1.97
PNKP-214ENST00000600573 RIMS1Q86UR5 1692 aaKnown RBP27.38■■□□□ 1.97
PNKP-214ENST00000600573 PER1O15534 1290 aaPredicted RBP27.38■■□□□ 1.97
PNKP-214ENST00000600573 SLIT1O75093 1534 aa27.38■■□□□ 1.97
PNKP-214ENST00000600573 LRPPRCP42704 1394 aaKnown RBP27.38■■□□□ 1.97
PNKP-214ENST00000600573 PANK3Q9H999 370 aa27.38■■□□□ 1.97
PNKP-214ENST00000600573 PLEKHG1Q9ULL1 1385 aa27.37■■□□□ 1.97
PNKP-214ENST00000600573 EVC2Q86UK5 1308 aa27.37■■□□□ 1.97
PNKP-214ENST00000600573 SIRT1Q96EB6 747 aa27.37■■□□□ 1.97
PNKP-214ENST00000600573 ARHGAP23Q9P227 1491 aa27.37■■□□□ 1.97
PNKP-214ENST00000600573 ABCC11Q96J66 1382 aa27.36■■□□□ 1.97
PNKP-214ENST00000600573 DLC1Q96QB1 1528 aa27.36■■□□□ 1.97
PNKP-214ENST00000600573 ARHGEF28Q8N1W1 1705 aaKnown RBP27.35■■□□□ 1.97
PNKP-214ENST00000600573 TXNDC2Q86VQ3 553 aa27.34■■□□□ 1.97
PNKP-214ENST00000600573 STK26Q9P289 416 aa27.34■■□□□ 1.97
PNKP-214ENST00000600573 QRICH2Q9H0J4 1663 aa27.34■■□□□ 1.97
PNKP-214ENST00000600573 POGKQ9P215 609 aa27.32■■□□□ 1.96
PNKP-214ENST00000600573 PTPRMP28827 1452 aa27.32■■□□□ 1.96
PNKP-214ENST00000600573 PLPPR3Q6T4P5 718 aa27.3■■□□□ 1.96
PNKP-214ENST00000600573 BCANQ96GW7 911 aa27.3■■□□□ 1.96
PNKP-214ENST00000600573 NRXN3Q9Y4C0 1643 aa27.3■■□□□ 1.96
PNKP-214ENST00000600573 LTKP29376 864 aa27.29■■□□□ 1.96
PNKP-214ENST00000600573 SETD1AO15047 1707 aaKnown RBP27.29■■□□□ 1.96
PNKP-214ENST00000600573 PRAM1Q96QH2 718 aa27.28■■□□□ 1.96
PNKP-214ENST00000600573 KNSTRNQ9Y448 316 aa27.28■■□□□ 1.96
PNKP-214ENST00000600573 MYOM1P52179 1685 aa27.28■■□□□ 1.96
PNKP-214ENST00000600573 GTF3C3Q9Y5Q9 886 aa27.27■■□□□ 1.96
PNKP-214ENST00000600573 CEP170BQ9Y4F5 1589 aaPredicted RBP27.25■■□□□ 1.95
PNKP-214ENST00000600573 NPC1L1Q9UHC9 1359 aa27.25■■□□□ 1.95
PNKP-214ENST00000600573 TECPR2O15040 1411 aa27.25■■□□□ 1.95
PNKP-214ENST00000600573 TBX22Q9Y458 520 aa27.25■■□□□ 1.95
PNKP-214ENST00000600573 NINLQ9Y2I6 1382 aa27.25■■□□□ 1.95
PNKP-214ENST00000600573 FAM135BQ49AJ0 1406 aa27.25■■□□□ 1.95
PNKP-214ENST00000600573 MYBBP1AQ9BQG0 1328 aaKnown RBP27.24■■□□□ 1.95
PNKP-214ENST00000600573 METP08581 1390 aa27.24■■□□□ 1.95
PNKP-214ENST00000600573 PARD3Q8TEW0 1356 aa27.24■■□□□ 1.95
PNKP-214ENST00000600573 ADAMTS13Q76LX8 1427 aa27.24■■□□□ 1.95
PNKP-214ENST00000600573 SETD1BQ9UPS6 1966 aaKnown RBP27.24■■□□□ 1.95
PNKP-214ENST00000600573 MRS2Q9HD23 443 aa27.23■■□□□ 1.95
PNKP-214ENST00000600573 MED14O60244 1454 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms