RNA–Protein interactions for RNA: ENST00000597823.1

LRMDA-213, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 4

Gene LRMDA, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-213ENST00000597823 METTL3Q86U44 580 aaKnown RBP12.77□□□□□ -0.37
LRMDA-213ENST00000597823 MAP2K5Q13163 448 aa12.72□□□□□ -0.37
LRMDA-213ENST00000597823 PRR14Q9BWN1 585 aa12.72□□□□□ -0.37
LRMDA-213ENST00000597823 ITGBL1O95965 494 aaPredicted RBP12.71□□□□□ -0.37
LRMDA-213ENST00000597823 KCNC4Q03721 635 aa12.71□□□□□ -0.37
LRMDA-213ENST00000597823 RSPH4AQ5TD94 716 aa12.71□□□□□ -0.37
LRMDA-213ENST00000597823 IFFO2Q5TF58 517 aa12.71□□□□□ -0.37
LRMDA-213ENST00000597823 MINK1Q8N4C8 1332 aaPredicted RBP12.69□□□□□ -0.38
LRMDA-213ENST00000597823 APLP1P51693 650 aa12.69□□□□□ -0.38
LRMDA-213ENST00000597823 IRF6O14896 467 aa12.67□□□□□ -0.38
LRMDA-213ENST00000597823 KMT5BQ4FZB7 885 aa12.67□□□□□ -0.38
LRMDA-213ENST00000597823 DAXXQ9UER7 740 aaPredicted RBP12.67□□□□□ -0.38
LRMDA-213ENST00000597823 KRI1Q8N9T8 703 aaKnown RBP12.66□□□□□ -0.38
LRMDA-213ENST00000597823 MTRQ99707 1265 aa12.64□□□□□ -0.39
LRMDA-213ENST00000597823 IL21Q9HBE4 155 aa12.64□□□□□ -0.39
LRMDA-213ENST00000597823 CFHP08603 1231 aa12.63□□□□□ -0.39
LRMDA-213ENST00000597823 NLRP7Q8WX94 980 aa12.63□□□□□ -0.39
LRMDA-213ENST00000597823 TJAP1Q5JTD0 557 aa12.62□□□□□ -0.39
LRMDA-213ENST00000597823 SULF1Q8IWU6 871 aa12.62□□□□□ -0.39
LRMDA-213ENST00000597823 RDH13Q8NBN7 331 aa12.62□□□□□ -0.39
LRMDA-213ENST00000597823 ZC3H15Q8WU90 426 aaKnown RBP12.62□□□□□ -0.39
LRMDA-213ENST00000597823 PHOX2BQ99453 314 aa12.62□□□□□ -0.39
LRMDA-213ENST00000597823 PCDHB3Q9Y5E6 796 aa12.62□□□□□ -0.39
LRMDA-213ENST00000597823 DDX11L8A8MPP1 907 aa12.61□□□□□ -0.39
LRMDA-213ENST00000597823 CCDC102AQ96A19 550 aa12.61□□□□□ -0.39
LRMDA-213ENST00000597823 BCANQ96GW7 911 aa12.61□□□□□ -0.39
LRMDA-213ENST00000597823 SLC10A3P09131 477 aa12.6□□□□□ -0.39
LRMDA-213ENST00000597823 A0A0G2JS52 829 aa12.59□□□□□ -0.39
LRMDA-213ENST00000597823 COPS2P61201 443 aa12.59□□□□□ -0.39
LRMDA-213ENST00000597823 ACTN4O43707 911 aaKnown RBP12.58□□□□□ -0.4
LRMDA-213ENST00000597823 ZMYND10O75800 440 aa12.58□□□□□ -0.4
LRMDA-213ENST00000597823 BARGINQ6ZT62 677 aa12.58□□□□□ -0.4
LRMDA-213ENST00000597823 MDM2Q00987 491 aaPredicted RBP12.55□□□□□ -0.4
LRMDA-213ENST00000597823 ZNF516Q92618 1163 aa12.55□□□□□ -0.4
LRMDA-213ENST00000597823 BLOC1S3Q6QNY0 202 aa12.53□□□□□ -0.4
LRMDA-213ENST00000597823 ZPR1O75312 459 aa12.52□□□□□ -0.41
LRMDA-213ENST00000597823 CLCN1P35523 988 aa12.51□□□□□ -0.41
LRMDA-213ENST00000597823 NR1I2O75469 434 aa12.5□□□□□ -0.41
LRMDA-213ENST00000597823 RGS20O76081 388 aa12.5□□□□□ -0.41
LRMDA-213ENST00000597823 GPCPD1Q9NPB8 672 aa12.5□□□□□ -0.41
LRMDA-213ENST00000597823 GCGRP47871 477 aa12.49□□□□□ -0.41
LRMDA-213ENST00000597823 GGCXP38435 758 aa12.47□□□□□ -0.41
LRMDA-213ENST00000597823 NKX2-3Q8TAU0 364 aa12.47□□□□□ -0.41
LRMDA-213ENST00000597823 ATP6V1AP38606 617 aa12.46□□□□□ -0.41
LRMDA-213ENST00000597823 PUS10Q3MIT2 529 aaKnown RBP12.46□□□□□ -0.41
LRMDA-213ENST00000597823 GRIPAP1Q4V328 841 aa12.46□□□□□ -0.41
LRMDA-213ENST00000597823 CD46P15529 392 aa12.45□□□□□ -0.42
LRMDA-213ENST00000597823 FUT2Q10981 343 aa12.45□□□□□ -0.42
LRMDA-213ENST00000597823 TTLL12Q14166 644 aaPredicted RBP12.45□□□□□ -0.42
LRMDA-213ENST00000597823 PPP1R18Q6NYC8 613 aa12.44□□□□□ -0.42
LRMDA-213ENST00000597823 AK7Q96M32 723 aa12.44□□□□□ -0.42
LRMDA-213ENST00000597823 SCUBE3Q8IX30 993 aa12.43□□□□□ -0.42
LRMDA-213ENST00000597823 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.43□□□□□ -0.42
LRMDA-213ENST00000597823 FAM217BQ9NTX9 383 aaPredicted RBP12.42□□□□□ -0.42
LRMDA-213ENST00000597823 TLL1O43897 1013 aa12.4□□□□□ -0.42
LRMDA-213ENST00000597823 AMHR2Q16671 573 aa12.4□□□□□ -0.42
LRMDA-213ENST00000597823 MORN1Q5T089 497 aa12.4□□□□□ -0.42
LRMDA-213ENST00000597823 KDM4AO75164 1064 aa12.39□□□□□ -0.43
LRMDA-213ENST00000597823 TMUB1Q9BVT8 246 aa12.39□□□□□ -0.43
LRMDA-213ENST00000597823 ADH1BP00325 375 aa12.38□□□□□ -0.43
LRMDA-213ENST00000597823 SSTR3P32745 418 aaPredicted RBP12.38□□□□□ -0.43
LRMDA-213ENST00000597823 TRIM66O15016 1216 aa12.37□□□□□ -0.43
LRMDA-213ENST00000597823 USP46P62068 366 aa12.36□□□□□ -0.43
LRMDA-213ENST00000597823 NUTM1Q86Y26 1132 aa12.36□□□□□ -0.43
LRMDA-213ENST00000597823 SPSB2Q99619 263 aa12.36□□□□□ -0.43
LRMDA-213ENST00000597823 REPIN1Q9BWE0 567 aaKnown RBP12.36□□□□□ -0.43
LRMDA-213ENST00000597823 SLC24A3Q9HC58 644 aa12.36□□□□□ -0.43
LRMDA-213ENST00000597823 SLC27A5Q9Y2P5 690 aa12.36□□□□□ -0.43
LRMDA-213ENST00000597823 FMNL1O95466 1100 aaPredicted RBP12.35□□□□□ -0.43
LRMDA-213ENST00000597823 GIGYF2Q6Y7W6 1299 aaKnown RBP12.34□□□□□ -0.43
LRMDA-213ENST00000597823 SLC6A16Q9GZN6 736 aa12.34□□□□□ -0.43
LRMDA-213ENST00000597823 S1PR4O95977 384 aa12.33□□□□□ -0.44
LRMDA-213ENST00000597823 Q3C1V9 767 aa12.32□□□□□ -0.44
LRMDA-213ENST00000597823 PRKD2Q9BZL6 878 aa12.31□□□□□ -0.44
LRMDA-213ENST00000597823 SALL2Q9Y467 1007 aaPredicted RBP12.31□□□□□ -0.44
LRMDA-213ENST00000597823 RNF223E7ERA6 249 aa12.3□□□□□ -0.44
LRMDA-213ENST00000597823 PARP9Q8IXQ6 854 aa12.3□□□□□ -0.44
LRMDA-213ENST00000597823 NISCHQ9Y2I1 1504 aa12.28□□□□□ -0.44
LRMDA-213ENST00000597823 HOXA2O43364 376 aa12.28□□□□□ -0.44
LRMDA-213ENST00000597823 PDE4DQ08499 809 aa12.28□□□□□ -0.44
LRMDA-213ENST00000597823 BRICD5Q6PL45 260 aa12.28□□□□□ -0.44
LRMDA-213ENST00000597823 THAP11Q96EK4 314 aa12.28□□□□□ -0.44
LRMDA-213ENST00000597823 ANKLE1Q8NAG6 615 aa12.27□□□□□ -0.45
LRMDA-213ENST00000597823 BEGAINQ9BUH8 593 aa12.27□□□□□ -0.45
LRMDA-213ENST00000597823 V9GY48 417 aaPredicted RBP12.27□□□□□ -0.45
LRMDA-213ENST00000597823 PPEF1O14829 653 aaPredicted RBP12.26□□□□□ -0.45
LRMDA-213ENST00000597823 IRX2Q9BZI1 471 aaPredicted RBP12.26□□□□□ -0.45
LRMDA-213ENST00000597823 RNF19BQ6ZMZ0 732 aa12.25□□□□□ -0.45
LRMDA-213ENST00000597823 SPIRE2Q8WWL2 714 aa12.24□□□□□ -0.45
LRMDA-213ENST00000597823 HLA-CQ95604 372 aa12.24□□□□□ -0.45
LRMDA-213ENST00000597823 DIXDC1Q155Q3 683 aa12.23□□□□□ -0.45
LRMDA-213ENST00000597823 FAM160A2Q8N612 972 aaPredicted RBP12.22□□□□□ -0.45
LRMDA-213ENST00000597823 FDX1P10109 184 aa12.21□□□□□ -0.45
LRMDA-213ENST00000597823 MS4A1P11836 297 aa12.21□□□□□ -0.45
LRMDA-213ENST00000597823 SLC19A1P41440 591 aa12.21□□□□□ -0.45
LRMDA-213ENST00000597823 GUCA2AQ02747 115 aa12.21□□□□□ -0.45
LRMDA-213ENST00000597823 MSS51Q4VC12 460 aa12.21□□□□□ -0.45
LRMDA-213ENST00000597823 USB1Q9BQ65 265 aaKnown RBP12.21□□□□□ -0.45
LRMDA-213ENST00000597823 PRDM9Q9NQV7 894 aa12.18□□□□□ -0.46
LRMDA-213ENST00000597823 MOXD2PA6NHM9 499 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms