RNA–Protein interactions for RNA: ENST00000597360.5

PDE4C-211, Transcript of phosphodiesterase 4C, humanhuman

TSL 2

Gene PDE4C, Length 3,511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-211ENST00000597360 C22orf23Q9BZE7 217 aa19.49■□□□□ 0.71
PDE4C-211ENST00000597360 SUPT6HQ7KZ85 1726 aaKnown RBP19.48■□□□□ 0.71
PDE4C-211ENST00000597360 NBPF1Q3BBV0 1214 aa19.48■□□□□ 0.71
PDE4C-211ENST00000597360 TNNT2P45379 298 aaPredicted RBP19.47■□□□□ 0.71
PDE4C-211ENST00000597360 PDZRN3Q9UPQ7 1066 aa19.47■□□□□ 0.71
PDE4C-211ENST00000597360 GBP4Q96PP9 640 aa19.47■□□□□ 0.71
PDE4C-211ENST00000597360 GOLGA6L22H0YM25 854 aa19.46■□□□□ 0.71
PDE4C-211ENST00000597360 RRP7AQ9Y3A4 280 aaKnown RBP19.46■□□□□ 0.71
PDE4C-211ENST00000597360 USP19O94966 1318 aa19.46■□□□□ 0.71
PDE4C-211ENST00000597360 NUP155O75694 1391 aa19.46■□□□□ 0.71
PDE4C-211ENST00000597360 CENPJQ9HC77 1338 aaPredicted RBP19.46■□□□□ 0.71
PDE4C-211ENST00000597360 ARHGEF11O15085 1522 aa19.45■□□□□ 0.7
PDE4C-211ENST00000597360 ABCC2Q92887 1545 aa19.45■□□□□ 0.7
PDE4C-211ENST00000597360 DENND4BO75064 1496 aaPredicted RBP19.45■□□□□ 0.7
PDE4C-211ENST00000597360 PLEKHD1A6NEE1 506 aa19.45■□□□□ 0.7
PDE4C-211ENST00000597360 NASPP49321 788 aaPredicted RBP19.45■□□□□ 0.7
PDE4C-211ENST00000597360 TPRNQ4KMQ1 711 aa19.44■□□□□ 0.7
PDE4C-211ENST00000597360 CGNL1Q0VF96 1302 aa19.44■□□□□ 0.7
PDE4C-211ENST00000597360 FSD2A1L4K1 749 aa19.44■□□□□ 0.7
PDE4C-211ENST00000597360 TMF1P82094 1093 aa19.44■□□□□ 0.7
PDE4C-211ENST00000597360 DDX49Q9Y6V7 483 aaKnown RBP19.44■□□□□ 0.7
PDE4C-211ENST00000597360 TROQ12816 1431 aaPredicted RBP19.44■□□□□ 0.7
PDE4C-211ENST00000597360 PTMAP06454 111 aaKnown RBP19.43■□□□□ 0.7
PDE4C-211ENST00000597360 ANTXR1Q9H6X2 564 aa19.43■□□□□ 0.7
PDE4C-211ENST00000597360 KDM6BO15054 1643 aa19.43■□□□□ 0.7
PDE4C-211ENST00000597360 FTSJ3Q8IY81 847 aaKnown RBP19.42■□□□□ 0.7
PDE4C-211ENST00000597360 TBC1D32Q96NH3 1257 aa19.42■□□□□ 0.7
PDE4C-211ENST00000597360 PMFBP1Q8TBY8 1022 aa19.42■□□□□ 0.7
PDE4C-211ENST00000597360 TEX14Q8IWB6 1497 aa19.42■□□□□ 0.7
PDE4C-211ENST00000597360 SPINK5Q9NQ38 1064 aaPredicted RBP19.41■□□□□ 0.7
PDE4C-211ENST00000597360 PLEKHH1Q9ULM0 1364 aa19.4■□□□□ 0.7
PDE4C-211ENST00000597360 XPCQ01831 940 aaPredicted RBP19.4■□□□□ 0.7
PDE4C-211ENST00000597360 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.4■□□□□ 0.7
PDE4C-211ENST00000597360 RWDD1Q9H446 243 aaPredicted RBP19.4■□□□□ 0.7
PDE4C-211ENST00000597360 KIF14Q15058 1648 aa19.39■□□□□ 0.7
PDE4C-211ENST00000597360 SLFN5Q08AF3 891 aa19.39■□□□□ 0.7
PDE4C-211ENST00000597360 GAS2L3Q86XJ1 694 aa19.39■□□□□ 0.7
PDE4C-211ENST00000597360 UQCRHLA0A096LP55 91 aa19.38■□□□□ 0.69
PDE4C-211ENST00000597360 UQCRHP07919 91 aa19.38■□□□□ 0.69
PDE4C-211ENST00000597360 ZSCAN30Q86W11 494 aa19.37■□□□□ 0.69
PDE4C-211ENST00000597360 UHRF1BP1LA0JNW5 1464 aa19.37■□□□□ 0.69
PDE4C-211ENST00000597360 PPP2R1AP30153 589 aa19.37■□□□□ 0.69
PDE4C-211ENST00000597360 MPNDQ8N594 471 aa19.37■□□□□ 0.69
PDE4C-211ENST00000597360 ADCY10Q96PN6 1610 aa19.36■□□□□ 0.69
PDE4C-211ENST00000597360 TSPY4P0CV99 314 aa19.36■□□□□ 0.69
PDE4C-211ENST00000597360 TSPY10P0CW01 314 aa19.36■□□□□ 0.69
PDE4C-211ENST00000597360 TNNQ9UQP3 1299 aa19.36■□□□□ 0.69
PDE4C-211ENST00000597360 TNPO1Q92973 898 aaKnown RBP19.35■□□□□ 0.69
PDE4C-211ENST00000597360 E9PSI1 815 aa19.34■□□□□ 0.69
PDE4C-211ENST00000597360 CALD1Q05682 793 aaKnown RBP19.34■□□□□ 0.69
PDE4C-211ENST00000597360 PARD3Q8TEW0 1356 aa19.34■□□□□ 0.69
PDE4C-211ENST00000597360 ZCCHC11Q5TAX3 1644 aaKnown RBP19.34■□□□□ 0.69
PDE4C-211ENST00000597360 CCDC173Q0VFZ6 552 aa19.33■□□□□ 0.68
PDE4C-211ENST00000597360 PCDHB15Q9Y5E8 787 aa19.33■□□□□ 0.68
PDE4C-211ENST00000597360 PER1O15534 1290 aaPredicted RBP19.33■□□□□ 0.68
PDE4C-211ENST00000597360 FOXD4L5Q5VV16 416 aaPredicted RBP19.32■□□□□ 0.68
PDE4C-211ENST00000597360 FOXD4L4Q8WXT5 416 aaPredicted RBP19.32■□□□□ 0.68
PDE4C-211ENST00000597360 BCORL1Q5H9F3 1711 aa19.32■□□□□ 0.68
PDE4C-211ENST00000597360 CAVIN1Q6NZI2 390 aaKnown RBP19.3■□□□□ 0.68
PDE4C-211ENST00000597360 GPATCH8Q9UKJ3 1502 aaKnown RBP19.3■□□□□ 0.68
PDE4C-211ENST00000597360 KIAA1107Q9UPP5 1409 aa19.29■□□□□ 0.68
PDE4C-211ENST00000597360 SKOR2Q2VWA4 1001 aaPredicted RBP19.29■□□□□ 0.68
PDE4C-211ENST00000597360 DMRT2Q9Y5R5 561 aa19.29■□□□□ 0.68
PDE4C-211ENST00000597360 ABCC10Q5T3U5 1492 aa19.29■□□□□ 0.68
PDE4C-211ENST00000597360 ITPRIPQ8IWB1 547 aa19.29■□□□□ 0.68
PDE4C-211ENST00000597360 PDE3AQ14432 1141 aa19.28■□□□□ 0.68
PDE4C-211ENST00000597360 RNF214Q8ND24 703 aa19.28■□□□□ 0.68
PDE4C-211ENST00000597360 MCTP1Q6DN14 999 aa19.28■□□□□ 0.68
PDE4C-211ENST00000597360 CYB5RLQ6IPT4 315 aa19.28■□□□□ 0.68
PDE4C-211ENST00000597360 MAP7D2Q96T17 732 aa19.28■□□□□ 0.68
PDE4C-211ENST00000597360 DAPK1P53355 1430 aa19.27■□□□□ 0.68
PDE4C-211ENST00000597360 OFD1O75665 1012 aa19.27■□□□□ 0.68
PDE4C-211ENST00000597360 PLCB2Q00722 1185 aa19.27■□□□□ 0.68
PDE4C-211ENST00000597360 TCOF1Q13428 1488 aaKnown RBP19.26■□□□□ 0.67
PDE4C-211ENST00000597360 LNPKQ9C0E8 428 aa19.25■□□□□ 0.67
PDE4C-211ENST00000597360 AAMPQ13685 434 aa19.25■□□□□ 0.67
PDE4C-211ENST00000597360 ISY1Q9ULR0 285 aaKnown RBP19.25■□□□□ 0.67
PDE4C-211ENST00000597360 SSFA2P28290 1259 aa19.25■□□□□ 0.67
PDE4C-211ENST00000597360 RIPK4P57078 832 aa19.25■□□□□ 0.67
PDE4C-211ENST00000597360 EIF3AQ14152 1382 aaKnown RBP19.25■□□□□ 0.67
PDE4C-211ENST00000597360 RIMBP3CA6NJZ7 1639 aa19.24■□□□□ 0.67
PDE4C-211ENST00000597360 RIMBP3BA6NNM3 1639 aa19.24■□□□□ 0.67
PDE4C-211ENST00000597360 RIMBP3Q9UFD9 1639 aa19.24■□□□□ 0.67
PDE4C-211ENST00000597360 RLBP1P12271 317 aa19.24■□□□□ 0.67
PDE4C-211ENST00000597360 CBX1P83916 185 aa19.24■□□□□ 0.67
PDE4C-211ENST00000597360 ABCC5O15440 1437 aa19.23■□□□□ 0.67
PDE4C-211ENST00000597360 DISP3Q9P2K9 1392 aa19.23■□□□□ 0.67
PDE4C-211ENST00000597360 CDC42BPAQ5VT25 1732 aa19.22■□□□□ 0.67
PDE4C-211ENST00000597360 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.21■□□□□ 0.67
PDE4C-211ENST00000597360 FOXD4L6Q3SYB3 417 aaPredicted RBP19.21■□□□□ 0.67
PDE4C-211ENST00000597360 FOXD4L3Q6VB84 417 aaPredicted RBP19.21■□□□□ 0.67
PDE4C-211ENST00000597360 MAPK8IP2Q13387 824 aaPredicted RBP19.21■□□□□ 0.67
PDE4C-211ENST00000597360 TTC37Q6PGP7 1564 aa19.21■□□□□ 0.67
PDE4C-211ENST00000597360 ANKRD30AQ9BXX3 1397 aa19.2■□□□□ 0.66
PDE4C-211ENST00000597360 NPM1P06748 294 aaKnown RBP eCLIP19.2■□□□□ 0.66
PDE4C-211ENST00000597360 BBXQ8WY36 941 aaPredicted RBP19.2■□□□□ 0.66
PDE4C-211ENST00000597360 TSC1Q92574 1164 aa19.2■□□□□ 0.66
PDE4C-211ENST00000597360 SMC4Q9NTJ3 1288 aa19.19■□□□□ 0.66
PDE4C-211ENST00000597360 FAM177BA6PVY3 158 aa19.19■□□□□ 0.66
PDE4C-211ENST00000597360 IGSF3O75054 1194 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms