RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 CLSTN1O94985 981 aa5.75□□□□□ -1.49
LRIT3-202ENST00000594814 ZMYM4Q5VZL5 1548 aa5.75□□□□□ -1.49
LRIT3-202ENST00000594814 SETD5Q9C0A6 1442 aa5.75□□□□□ -1.49
LRIT3-202ENST00000594814 ARIH1Q9Y4X5 557 aaPredicted RBP5.75□□□□□ -1.49
LRIT3-202ENST00000594814 PREX2Q70Z35 1606 aa5.74□□□□□ -1.49
LRIT3-202ENST00000594814 INSRP06213 1382 aa5.74□□□□□ -1.49
LRIT3-202ENST00000594814 CALD1Q05682 793 aaKnown RBP5.74□□□□□ -1.49
LRIT3-202ENST00000594814 NCOA1Q15788 1441 aa5.74□□□□□ -1.49
LRIT3-202ENST00000594814 DNMT1P26358 1616 aaKnown RBP5.74□□□□□ -1.49
LRIT3-202ENST00000594814 NEFMP07197 916 aa5.74□□□□□ -1.49
LRIT3-202ENST00000594814 TERF1P54274 439 aa5.74□□□□□ -1.49
LRIT3-202ENST00000594814 IPO4Q8TEX9 1081 aaKnown RBP5.74□□□□□ -1.49
LRIT3-202ENST00000594814 HFM1A2PYH4 1435 aa5.73□□□□□ -1.49
LRIT3-202ENST00000594814 ARHGAP5Q13017 1502 aa5.73□□□□□ -1.49
LRIT3-202ENST00000594814 AKNAQ7Z591 1439 aa5.73□□□□□ -1.49
LRIT3-202ENST00000594814 VGFO15240 615 aaPredicted RBP5.73□□□□□ -1.49
LRIT3-202ENST00000594814 TPM2P07951 284 aa5.73□□□□□ -1.49
LRIT3-202ENST00000594814 FAM69CQ0P6D2 419 aa5.73□□□□□ -1.49
LRIT3-202ENST00000594814 MTERF4Q7Z6M4 381 aaKnown RBP5.73□□□□□ -1.49
LRIT3-202ENST00000594814 IFNLR1Q8IU57 520 aaPredicted RBP5.73□□□□□ -1.49
LRIT3-202ENST00000594814 ABCA9Q8IUA7 1624 aa5.73□□□□□ -1.49
LRIT3-202ENST00000594814 IL27Q8NEV9 243 aa5.72□□□□□ -1.49
LRIT3-202ENST00000594814 CWC22Q9HCG8 908 aaKnown RBP5.72□□□□□ -1.49
LRIT3-202ENST00000594814 SLC52A1Q9NWF4 448 aa5.72□□□□□ -1.49
LRIT3-202ENST00000594814 FANCAO15360 1455 aa5.71□□□□□ -1.49
LRIT3-202ENST00000594814 CD109Q6YHK3 1445 aa5.71□□□□□ -1.5
LRIT3-202ENST00000594814 BARGINQ6ZT62 677 aa5.71□□□□□ -1.5
LRIT3-202ENST00000594814 SIGLEC1Q9BZZ2 1709 aa5.71□□□□□ -1.5
LRIT3-202ENST00000594814 SCAPERQ9BY12 1400 aa5.71□□□□□ -1.5
LRIT3-202ENST00000594814 MYO5CQ9NQX4 1742 aa5.71□□□□□ -1.5
LRIT3-202ENST00000594814 CROCC2H7BZ55 1655 aa5.71□□□□□ -1.5
LRIT3-202ENST00000594814 UNCXA6NJT0 531 aa5.71□□□□□ -1.5
LRIT3-202ENST00000594814 SIRT1Q96EB6 747 aa5.71□□□□□ -1.5
LRIT3-202ENST00000594814 C9orf84Q5VXU9 1444 aa5.71□□□□□ -1.5
LRIT3-202ENST00000594814 ABCC1P33527 1531 aa5.7□□□□□ -1.5
LRIT3-202ENST00000594814 HSP90AA1P07900 732 aaKnown RBP5.7□□□□□ -1.5
LRIT3-202ENST00000594814 HSP90AA2PQ14568 343 aaPredicted RBP5.7□□□□□ -1.5
LRIT3-202ENST00000594814 FOXD4L1Q9NU39 408 aa5.7□□□□□ -1.5
LRIT3-202ENST00000594814 KTN1Q86UP2 1357 aaKnown RBP5.7□□□□□ -1.5
LRIT3-202ENST00000594814 LOC102724159A0A0B4J2E5 919 aa5.7□□□□□ -1.5
LRIT3-202ENST00000594814 PWP2Q15269 919 aaKnown RBP5.7□□□□□ -1.5
LRIT3-202ENST00000594814 PLEKHH2Q8IVE3 1493 aa5.7□□□□□ -1.5
LRIT3-202ENST00000594814 CNPY4Q8N129 248 aa5.7□□□□□ -1.5
LRIT3-202ENST00000594814 MKL1Q969V6 931 aa5.7□□□□□ -1.5
LRIT3-202ENST00000594814 PDCL3Q9H2J4 239 aa5.7□□□□□ -1.5
LRIT3-202ENST00000594814 PZPP20742 1482 aa5.69□□□□□ -1.5
LRIT3-202ENST00000594814 ITSN2Q9NZM3 1697 aa5.69□□□□□ -1.5
LRIT3-202ENST00000594814 CLCN1P35523 988 aa5.69□□□□□ -1.5
LRIT3-202ENST00000594814 CCDC27Q2M243 656 aa5.69□□□□□ -1.5
LRIT3-202ENST00000594814 TSPOAP1O95153 1857 aa5.69□□□□□ -1.5
LRIT3-202ENST00000594814 NBR1Q14596 966 aa5.69□□□□□ -1.5
LRIT3-202ENST00000594814 PIAS4Q8N2W9 510 aaPredicted RBP5.69□□□□□ -1.5
LRIT3-202ENST00000594814 MPHOSPH9Q99550 1183 aa5.69□□□□□ -1.5
LRIT3-202ENST00000594814 ZMYM3Q14202 1370 aa5.69□□□□□ -1.5
LRIT3-202ENST00000594814 CNTLNQ9NXG0 1405 aa5.69□□□□□ -1.5
LRIT3-202ENST00000594814 EFCAB2Q5VUJ9 269 aa5.68□□□□□ -1.5
LRIT3-202ENST00000594814 YEATS2Q9ULM3 1422 aa5.68□□□□□ -1.5
LRIT3-202ENST00000594814 FRMPD1Q5SYB0 1578 aa5.68□□□□□ -1.5
LRIT3-202ENST00000594814 ADGRL2O95490 1459 aa5.68□□□□□ -1.5
LRIT3-202ENST00000594814 KIF15Q9NS87 1388 aa5.68□□□□□ -1.5
LRIT3-202ENST00000594814 PAK3O75914 559 aaPredicted RBP5.68□□□□□ -1.5
LRIT3-202ENST00000594814 PSEN1P49768 467 aa5.68□□□□□ -1.5
LRIT3-202ENST00000594814 RIPOR2Q9Y4F9 1068 aa5.68□□□□□ -1.5
LRIT3-202ENST00000594814 ADGRL1O94910 1474 aa5.68□□□□□ -1.5
LRIT3-202ENST00000594814 ROCK1Q13464 1354 aa5.67□□□□□ -1.5
LRIT3-202ENST00000594814 DNAJC14Q6Y2X3 702 aaPredicted RBP5.67□□□□□ -1.5
LRIT3-202ENST00000594814 GCC2Q8IWJ2 1684 aa5.67□□□□□ -1.5
LRIT3-202ENST00000594814 CCDC141Q6ZP82 1450 aa5.67□□□□□ -1.5
LRIT3-202ENST00000594814 TRIM52Q96A61 297 aa5.67□□□□□ -1.5
LRIT3-202ENST00000594814 HIRIP3Q9BW71 556 aaPredicted RBP5.67□□□□□ -1.5
LRIT3-202ENST00000594814 KIAA1107Q9UPP5 1409 aa5.67□□□□□ -1.5
LRIT3-202ENST00000594814 ARHGEF5Q12774 1597 aa5.67□□□□□ -1.5
LRIT3-202ENST00000594814 ZFYVE16Q7Z3T8 1539 aa5.67□□□□□ -1.5
LRIT3-202ENST00000594814 ANKRD50Q9ULJ7 1429 aa5.67□□□□□ -1.5
LRIT3-202ENST00000594814 BORCS6Q96GS4 357 aa5.67□□□□□ -1.5
LRIT3-202ENST00000594814 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.67□□□□□ -1.5
LRIT3-202ENST00000594814 KIDINS220Q9ULH0 1771 aa5.67□□□□□ -1.5
LRIT3-202ENST00000594814 TAF3Q5VWG9 929 aa5.66□□□□□ -1.5
LRIT3-202ENST00000594814 PLA2R1Q13018 1463 aa5.66□□□□□ -1.5
LRIT3-202ENST00000594814 NAP1L2Q9ULW6 460 aaPredicted RBP5.66□□□□□ -1.5
LRIT3-202ENST00000594814 IRF5Q13568 498 aa5.66□□□□□ -1.5
LRIT3-202ENST00000594814 SLC39A13Q96H72 371 aa5.66□□□□□ -1.5
LRIT3-202ENST00000594814 AMOTL2Q9Y2J4 779 aa5.66□□□□□ -1.5
LRIT3-202ENST00000594814 EVI5LQ96CN4 794 aa5.65□□□□□ -1.5
LRIT3-202ENST00000594814 SUGT1Q9Y2Z0 365 aa5.65□□□□□ -1.5
LRIT3-202ENST00000594814 TSPY4P0CV99 314 aa5.65□□□□□ -1.51
LRIT3-202ENST00000594814 TSPY10P0CW01 314 aa5.65□□□□□ -1.51
LRIT3-202ENST00000594814 PTMSP20962 102 aa5.65□□□□□ -1.51
LRIT3-202ENST00000594814 MCCP23508 829 aa5.65□□□□□ -1.51
LRIT3-202ENST00000594814 UTP14CQ5TAP6 766 aaKnown RBP5.65□□□□□ -1.51
LRIT3-202ENST00000594814 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.65□□□□□ -1.51
LRIT3-202ENST00000594814 SMAP1Q8IYB5 467 aaPredicted RBP5.65□□□□□ -1.51
LRIT3-202ENST00000594814 ADGBQ8N7X0 1667 aa5.64□□□□□ -1.51
LRIT3-202ENST00000594814 HNRNPUQ00839 825 aaKnown RBP eCLIP5.64□□□□□ -1.51
LRIT3-202ENST00000594814 TMTC2Q8N394 836 aa5.64□□□□□ -1.51
LRIT3-202ENST00000594814 BACH2Q9BYV9 841 aa5.64□□□□□ -1.51
LRIT3-202ENST00000594814 NUDCQ9Y266 331 aa5.64□□□□□ -1.51
LRIT3-202ENST00000594814 SPAG9O60271 1321 aaKnown RBP5.64□□□□□ -1.51
LRIT3-202ENST00000594814 ANKRD30BQ9BXX2 1392 aa5.64□□□□□ -1.51
LRIT3-202ENST00000594814 POGZQ7Z3K3 1410 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms