RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 SF3B2Q13435 895 aaKnown RBP19.52■□□□□ 0.72
ZNF558-202ENST00000593891 C19orf44Q9H6X5 657 aa19.52■□□□□ 0.72
ZNF558-202ENST00000593891 DIP2AQ14689 1571 aa19.52■□□□□ 0.71
ZNF558-202ENST00000593891 KDM5AP29375 1690 aaKnown RBP19.52■□□□□ 0.71
ZNF558-202ENST00000593891 CASKIN1Q8WXD9 1431 aa19.51■□□□□ 0.71
ZNF558-202ENST00000593891 ADAMTS2O95450 1211 aa19.51■□□□□ 0.71
ZNF558-202ENST00000593891 HRCP23327 699 aa19.51■□□□□ 0.71
ZNF558-202ENST00000593891 BLMP54132 1417 aaPredicted RBP19.51■□□□□ 0.71
ZNF558-202ENST00000593891 SETD5Q9C0A6 1442 aa19.51■□□□□ 0.71
ZNF558-202ENST00000593891 DEFB132Q7Z7B7 95 aa19.5■□□□□ 0.71
ZNF558-202ENST00000593891 TET3O43151 1660 aa19.49■□□□□ 0.71
ZNF558-202ENST00000593891 RSPH4AQ5TD94 716 aa19.49■□□□□ 0.71
ZNF558-202ENST00000593891 PSDA5PKW4 1024 aaPredicted RBP19.48■□□□□ 0.71
ZNF558-202ENST00000593891 SENP3-EIF4A1A0A087X0R7 540 aa19.45■□□□□ 0.7
ZNF558-202ENST00000593891 EHMT2Q96KQ7 1210 aa19.45■□□□□ 0.7
ZNF558-202ENST00000593891 NHSL1Q5SYE7 1610 aa19.44■□□□□ 0.7
ZNF558-202ENST00000593891 CAMSAP2Q08AD1 1489 aa19.44■□□□□ 0.7
ZNF558-202ENST00000593891 EP400Q96L91 3159 aa19.44■□□□□ 0.7
ZNF558-202ENST00000593891 PNPLA6Q8IY17 1366 aa19.43■□□□□ 0.7
ZNF558-202ENST00000593891 TSPY4P0CV99 314 aa19.42■□□□□ 0.7
ZNF558-202ENST00000593891 TSPY10P0CW01 314 aa19.42■□□□□ 0.7
ZNF558-202ENST00000593891 FNBP4Q8N3X1 1017 aaPredicted RBP19.42■□□□□ 0.7
ZNF558-202ENST00000593891 CCDC141Q6ZP82 1450 aa19.41■□□□□ 0.7
ZNF558-202ENST00000593891 EFCAB6Q5THR3 1501 aa19.41■□□□□ 0.7
ZNF558-202ENST00000593891 ATRNO75882 1429 aa19.4■□□□□ 0.7
ZNF558-202ENST00000593891 DCAF8L1A6NGE4 600 aa19.39■□□□□ 0.69
ZNF558-202ENST00000593891 IDI1Q13907 227 aa19.38■□□□□ 0.69
ZNF558-202ENST00000593891 MROH1Q8NDA8 1641 aa19.38■□□□□ 0.69
ZNF558-202ENST00000593891 MAST1Q9Y2H9 1570 aa19.38■□□□□ 0.69
ZNF558-202ENST00000593891 ARHGAP31Q2M1Z3 1444 aa19.37■□□□□ 0.69
ZNF558-202ENST00000593891 PIK3C2BO00750 1634 aa19.36■□□□□ 0.69
ZNF558-202ENST00000593891 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.35■□□□□ 0.69
ZNF558-202ENST00000593891 ASXL1Q8IXJ9 1541 aa19.35■□□□□ 0.69
ZNF558-202ENST00000593891 MTUS2Q5JR59 1369 aa19.34■□□□□ 0.69
ZNF558-202ENST00000593891 PPP1R15AO75807 674 aaPredicted RBP19.34■□□□□ 0.69
ZNF558-202ENST00000593891 GJD4Q96KN9 370 aaPredicted RBP19.34■□□□□ 0.69
ZNF558-202ENST00000593891 TBX22Q9Y458 520 aa19.34■□□□□ 0.69
ZNF558-202ENST00000593891 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.34■□□□□ 0.69
ZNF558-202ENST00000593891 CFAP65Q6ZU64 1925 aaKnown RBP19.33■□□□□ 0.69
ZNF558-202ENST00000593891 HDGFP51858 240 aaKnown RBP19.33■□□□□ 0.68
ZNF558-202ENST00000593891 BCL9LQ86UU0 1499 aa19.32■□□□□ 0.68
ZNF558-202ENST00000593891 FYCO1Q9BQS8 1478 aa19.32■□□□□ 0.68
ZNF558-202ENST00000593891 BAG6P46379 1132 aa19.31■□□□□ 0.68
ZNF558-202ENST00000593891 PLEKHG1Q9ULL1 1385 aa19.31■□□□□ 0.68
ZNF558-202ENST00000593891 DDX17Q92841 729 aaKnown RBP19.3■□□□□ 0.68
ZNF558-202ENST00000593891 PTCH1Q13635 1447 aa19.3■□□□□ 0.68
ZNF558-202ENST00000593891 CHD2O14647 1828 aaKnown RBP19.28■□□□□ 0.68
ZNF558-202ENST00000593891 DCCP43146 1447 aa19.27■□□□□ 0.68
ZNF558-202ENST00000593891 R3HDM1Q15032 1099 aaKnown RBP19.27■□□□□ 0.68
ZNF558-202ENST00000593891 CEP152O94986 1710 aa19.25■□□□□ 0.67
ZNF558-202ENST00000593891 C1QTNF8P60827 252 aa19.24■□□□□ 0.67
ZNF558-202ENST00000593891 MST1RQ04912 1400 aa19.23■□□□□ 0.67
ZNF558-202ENST00000593891 EIF2AK4Q9P2K8 1649 aaKnown RBP19.22■□□□□ 0.67
ZNF558-202ENST00000593891 PIK3R4Q99570 1358 aa19.22■□□□□ 0.67
ZNF558-202ENST00000593891 ZNF784Q8NCA9 323 aaPredicted RBP19.22■□□□□ 0.67
ZNF558-202ENST00000593891 SLC52A1Q9NWF4 448 aa19.22■□□□□ 0.67
ZNF558-202ENST00000593891 UNC13BO14795 1591 aa19.22■□□□□ 0.67
ZNF558-202ENST00000593891 AMOTL2Q9Y2J4 779 aa19.21■□□□□ 0.67
ZNF558-202ENST00000593891 ADGRB3O60242 1522 aa19.18■□□□□ 0.66
ZNF558-202ENST00000593891 SEPT12Q8IYM1 358 aa19.17■□□□□ 0.66
ZNF558-202ENST00000593891 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.17■□□□□ 0.66
ZNF558-202ENST00000593891 KANK1Q14678 1352 aa19.17■□□□□ 0.66
ZNF558-202ENST00000593891 ZFYVE9O95405 1425 aa19.16■□□□□ 0.66
ZNF558-202ENST00000593891 RIMS2Q9UQ26 1411 aa19.16■□□□□ 0.66
ZNF558-202ENST00000593891 ARHGEF5Q12774 1597 aa19.15■□□□□ 0.66
ZNF558-202ENST00000593891 EN1Q05925 392 aaPredicted RBP19.15■□□□□ 0.66
ZNF558-202ENST00000593891 KRT27Q7Z3Y8 459 aa19.15■□□□□ 0.66
ZNF558-202ENST00000593891 UNC5CLQ8IV45 518 aa19.14■□□□□ 0.65
ZNF558-202ENST00000593891 PPP1R1BQ9UD71 204 aaPredicted RBP19.14■□□□□ 0.65
ZNF558-202ENST00000593891 SOS2Q07890 1332 aaPredicted RBP19.14■□□□□ 0.65
ZNF558-202ENST00000593891 CEP162Q5TB80 1403 aa19.14■□□□□ 0.65
ZNF558-202ENST00000593891 RALGAPBQ86X10 1494 aa19.14■□□□□ 0.65
ZNF558-202ENST00000593891 ADAMTS13Q76LX8 1427 aa19.11■□□□□ 0.65
ZNF558-202ENST00000593891 DUOX2Q9NRD8 1548 aa19.09■□□□□ 0.65
ZNF558-202ENST00000593891 NOS1P29475 1434 aa19.08■□□□□ 0.65
ZNF558-202ENST00000593891 SPHKAPQ2M3C7 1700 aa19.08■□□□□ 0.65
ZNF558-202ENST00000593891 EHBP1L1Q8N3D4 1523 aa19.08■□□□□ 0.64
ZNF558-202ENST00000593891 NINLQ9Y2I6 1382 aa19.06■□□□□ 0.64
ZNF558-202ENST00000593891 MYOM2P54296 1465 aa19.05■□□□□ 0.64
ZNF558-202ENST00000593891 PTPRUQ92729 1446 aa19.05■□□□□ 0.64
ZNF558-202ENST00000593891 GLI3P10071 1580 aa19.05■□□□□ 0.64
ZNF558-202ENST00000593891 RPRD2Q5VT52 1461 aaKnown RBP19.04■□□□□ 0.64
ZNF558-202ENST00000593891 ONECUT3O60422 494 aaPredicted RBP19.04■□□□□ 0.64
ZNF558-202ENST00000593891 TRPM2O94759 1503 aa19.04■□□□□ 0.64
ZNF558-202ENST00000593891 SPON1Q9HCB6 807 aa19.03■□□□□ 0.64
ZNF558-202ENST00000593891 C1orf167Q5SNV9 1468 aa19.03■□□□□ 0.64
ZNF558-202ENST00000593891 CHGAP10645 457 aaKnown RBP19.02■□□□□ 0.64
ZNF558-202ENST00000593891 ORAI2Q96SN7 254 aa19.02■□□□□ 0.64
ZNF558-202ENST00000593891 ERBINQ96RT1 1412 aa19.01■□□□□ 0.63
ZNF558-202ENST00000593891 A0A0G2JS52 829 aa19.01■□□□□ 0.63
ZNF558-202ENST00000593891 MYT1Q01538 1121 aa19.01■□□□□ 0.63
ZNF558-202ENST00000593891 CCDC9Q9Y3X0 531 aaKnown RBP19.01■□□□□ 0.63
ZNF558-202ENST00000593891 ADGRL3Q9HAR2 1447 aa19■□□□□ 0.63
ZNF558-202ENST00000593891 VPS72Q15906 364 aa19■□□□□ 0.63
ZNF558-202ENST00000593891 EZH2Q15910 746 aaKnown RBP19■□□□□ 0.63
ZNF558-202ENST00000593891 KIF15Q9NS87 1388 aa19■□□□□ 0.63
ZNF558-202ENST00000593891 COL22A1Q8NFW1 1626 aaPredicted RBP19■□□□□ 0.63
ZNF558-202ENST00000593891 LMTK2Q8IWU2 1503 aa19■□□□□ 0.63
ZNF558-202ENST00000593891 BRWD3Q6RI45 1802 aa18.99■□□□□ 0.63
ZNF558-202ENST00000593891 RRP7BPQ9NSQ0 103 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms