RNA–Protein interactions for RNA: ENST00000592442.1

LAMA3-213, Transcript of laminin subunit alpha 3, humanhuman

TSL 3

Gene LAMA3, Length 473 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-213ENST00000592442 MINK1Q8N4C8 1332 aaPredicted RBP8.25□□□□□ -1.09
LAMA3-213ENST00000592442 IRF6O14896 467 aa8.24□□□□□ -1.09
LAMA3-213ENST00000592442 OATP04181 439 aa8.24□□□□□ -1.09
LAMA3-213ENST00000592442 PRKCSHP14314 528 aaPredicted RBP8.24□□□□□ -1.09
LAMA3-213ENST00000592442 TTC13Q8NBP0 860 aa8.24□□□□□ -1.09
LAMA3-213ENST00000592442 CCDC102AQ96A19 550 aa8.24□□□□□ -1.09
LAMA3-213ENST00000592442 SLC24A3Q9HC58 644 aa8.24□□□□□ -1.09
LAMA3-213ENST00000592442 ADGRG1Q9Y653 693 aa8.24□□□□□ -1.09
LAMA3-213ENST00000592442 SOCS7O14512 581 aa8.23□□□□□ -1.09
LAMA3-213ENST00000592442 FANCD2Q9BXW9 1451 aa8.22□□□□□ -1.09
LAMA3-213ENST00000592442 HRO43593 1189 aa8.22□□□□□ -1.09
LAMA3-213ENST00000592442 HDGFP51858 240 aaKnown RBP8.22□□□□□ -1.09
LAMA3-213ENST00000592442 FAM98CQ17RN3 349 aaKnown RBP8.22□□□□□ -1.09
LAMA3-213ENST00000592442 CEP164Q9UPV0 1460 aa8.21□□□□□ -1.09
LAMA3-213ENST00000592442 RNF40O75150 1001 aa8.21□□□□□ -1.1
LAMA3-213ENST00000592442 BHMG1C9JSJ3 638 aaPredicted RBP8.2□□□□□ -1.1
LAMA3-213ENST00000592442 C3orf80F5H4A9 247 aa8.2□□□□□ -1.1
LAMA3-213ENST00000592442 METTL3Q86U44 580 aaKnown RBP8.2□□□□□ -1.1
LAMA3-213ENST00000592442 AK7Q96M32 723 aa8.2□□□□□ -1.1
LAMA3-213ENST00000592442 LMTK3Q96Q04 1460 aa8.19□□□□□ -1.1
LAMA3-213ENST00000592442 SLC4A3P48751 1232 aa8.19□□□□□ -1.1
LAMA3-213ENST00000592442 LAPTM4BQ86VI4 370 aa8.19□□□□□ -1.1
LAMA3-213ENST00000592442 PXYLP1Q8TE99 480 aa8.19□□□□□ -1.1
LAMA3-213ENST00000592442 ZFRQ96KR1 1074 aaKnown RBP8.19□□□□□ -1.1
LAMA3-213ENST00000592442 RCCD1A6NED2 376 aa8.18□□□□□ -1.1
LAMA3-213ENST00000592442 DNAJB2P25686 324 aa8.18□□□□□ -1.1
LAMA3-213ENST00000592442 TTLL12Q14166 644 aaPredicted RBP8.18□□□□□ -1.1
LAMA3-213ENST00000592442 ANKK1Q8NFD2 765 aa8.18□□□□□ -1.1
LAMA3-213ENST00000592442 NLRP7Q8WX94 980 aa8.18□□□□□ -1.1
LAMA3-213ENST00000592442 WNT2BQ93097 391 aa8.18□□□□□ -1.1
LAMA3-213ENST00000592442 EYA1Q99502 592 aa8.18□□□□□ -1.1
LAMA3-213ENST00000592442 MYT1LQ9UL68 1186 aa8.18□□□□□ -1.1
LAMA3-213ENST00000592442 KCTD12Q96CX2 325 aaKnown RBP8.17□□□□□ -1.1
LAMA3-213ENST00000592442 MRC2Q9UBG0 1479 aa8.17□□□□□ -1.1
LAMA3-213ENST00000592442 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.16□□□□□ -1.1
LAMA3-213ENST00000592442 SAMD7Q7Z3H4 446 aa8.16□□□□□ -1.1
LAMA3-213ENST00000592442 LRCH3Q96II8 777 aa8.16□□□□□ -1.1
LAMA3-213ENST00000592442 KIF21AQ7Z4S6 1674 aa8.15□□□□□ -1.1
LAMA3-213ENST00000592442 MDM2Q00987 491 aaPredicted RBP8.15□□□□□ -1.1
LAMA3-213ENST00000592442 SPNS2Q8IVW8 549 aa8.15□□□□□ -1.1
LAMA3-213ENST00000592442 PHOX2BQ99453 314 aa8.15□□□□□ -1.1
LAMA3-213ENST00000592442 TRIM66O15016 1216 aa8.14□□□□□ -1.11
LAMA3-213ENST00000592442 SWT1Q5T5J6 900 aaKnown RBP8.14□□□□□ -1.11
LAMA3-213ENST00000592442 ILDR2Q71H61 639 aa8.14□□□□□ -1.11
LAMA3-213ENST00000592442 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.14□□□□□ -1.11
LAMA3-213ENST00000592442 ABCC8Q09428 1581 aa8.14□□□□□ -1.11
LAMA3-213ENST00000592442 TMEM134Q9H6X4 195 aa8.13□□□□□ -1.11
LAMA3-213ENST00000592442 PRDM2Q13029 1718 aa8.12□□□□□ -1.11
LAMA3-213ENST00000592442 CLCN1P35523 988 aa8.12□□□□□ -1.11
LAMA3-213ENST00000592442 BCAMP50895 628 aa8.12□□□□□ -1.11
LAMA3-213ENST00000592442 SLF2Q8IX21 1173 aa8.12□□□□□ -1.11
LAMA3-213ENST00000592442 RNF166Q96A37 237 aaPredicted RBP8.12□□□□□ -1.11
LAMA3-213ENST00000592442 THOC2Q8NI27 1593 aaKnown RBP8.11□□□□□ -1.11
LAMA3-213ENST00000592442 PDE4DQ08499 809 aa8.11□□□□□ -1.11
LAMA3-213ENST00000592442 GPCPD1Q9NPB8 672 aa8.11□□□□□ -1.11
LAMA3-213ENST00000592442 WDR62O43379 1518 aa8.1□□□□□ -1.11
LAMA3-213ENST00000592442 SOWAHBA6NEL2 793 aa8.1□□□□□ -1.11
LAMA3-213ENST00000592442 DDX11L8A8MPP1 907 aa8.1□□□□□ -1.11
LAMA3-213ENST00000592442 PTPN5P54829 565 aa8.1□□□□□ -1.11
LAMA3-213ENST00000592442 AMHR2Q16671 573 aa8.1□□□□□ -1.11
LAMA3-213ENST00000592442 RSPH4AQ5TD94 716 aa8.1□□□□□ -1.11
LAMA3-213ENST00000592442 SULF1Q8IWU6 871 aa8.1□□□□□ -1.11
LAMA3-213ENST00000592442 RDH13Q8NBN7 331 aa8.1□□□□□ -1.11
LAMA3-213ENST00000592442 DAXXQ9UER7 740 aaPredicted RBP8.1□□□□□ -1.11
LAMA3-213ENST00000592442 HPS5Q9UPZ3 1129 aa8.1□□□□□ -1.11
LAMA3-213ENST00000592442 PPP4CP60510 307 aa8.09□□□□□ -1.11
LAMA3-213ENST00000592442 NEUROD2Q15784 382 aa8.09□□□□□ -1.11
LAMA3-213ENST00000592442 THSD4Q6ZMP0 1018 aa8.09□□□□□ -1.11
LAMA3-213ENST00000592442 URB2Q14146 1524 aaKnown RBP8.08□□□□□ -1.12
LAMA3-213ENST00000592442 GIGYF2Q6Y7W6 1299 aaKnown RBP8.08□□□□□ -1.12
LAMA3-213ENST00000592442 PARP9Q8IXQ6 854 aa8.08□□□□□ -1.12
LAMA3-213ENST00000592442 TOPBP1Q92547 1522 aa8.08□□□□□ -1.12
LAMA3-213ENST00000592442 DNMBPQ6XZF7 1577 aa8.07□□□□□ -1.12
LAMA3-213ENST00000592442 MMRN1Q13201 1228 aa8.07□□□□□ -1.12
LAMA3-213ENST00000592442 NECTIN2Q92692 538 aa8.07□□□□□ -1.12
LAMA3-213ENST00000592442 TSR3Q9UJK0 312 aaKnown RBP8.07□□□□□ -1.12
LAMA3-213ENST00000592442 WRNQ14191 1432 aaPredicted RBP eCLIP8.06□□□□□ -1.12
LAMA3-213ENST00000592442 GPBP1L1Q9HC44 474 aaPredicted RBP8.05□□□□□ -1.12
LAMA3-213ENST00000592442 PLSCR2Q9NRY7 297 aa8.05□□□□□ -1.12
LAMA3-213ENST00000592442 WBP1LQ9NX94 342 aa8.05□□□□□ -1.12
LAMA3-213ENST00000592442 CFHP08603 1231 aa8.04□□□□□ -1.12
LAMA3-213ENST00000592442 SSTR3P32745 418 aaPredicted RBP8.04□□□□□ -1.12
LAMA3-213ENST00000592442 REPIN1Q9BWE0 567 aaKnown RBP8.04□□□□□ -1.12
LAMA3-213ENST00000592442 IFT140Q96RY7 1462 aa8.04□□□□□ -1.12
LAMA3-213ENST00000592442 SOGA1O94964 1423 aa8.03□□□□□ -1.12
LAMA3-213ENST00000592442 FAM217BQ9NTX9 383 aaPredicted RBP8.03□□□□□ -1.12
LAMA3-213ENST00000592442 HCSTQ9UBK5 93 aa8.03□□□□□ -1.12
LAMA3-213ENST00000592442 SLC10A3P09131 477 aa8.02□□□□□ -1.13
LAMA3-213ENST00000592442 KMT5BQ4FZB7 885 aa8.02□□□□□ -1.13
LAMA3-213ENST00000592442 KDM4CQ9H3R0 1056 aa8.02□□□□□ -1.13
LAMA3-213ENST00000592442 CUX1P39880 1505 aa8.02□□□□□ -1.13
LAMA3-213ENST00000592442 FGD5Q6ZNL6 1462 aa8.01□□□□□ -1.13
LAMA3-213ENST00000592442 PRR14Q9BWN1 585 aa8.01□□□□□ -1.13
LAMA3-213ENST00000592442 POLA1P09884 1462 aaPredicted RBP8□□□□□ -1.13
LAMA3-213ENST00000592442 BRPF1P55201 1214 aaPredicted RBP8□□□□□ -1.13
LAMA3-213ENST00000592442 NYAP1Q6ZVC0 841 aa8□□□□□ -1.13
LAMA3-213ENST00000592442 NUTM1Q86Y26 1132 aa8□□□□□ -1.13
LAMA3-213ENST00000592442 BEGAINQ9BUH8 593 aa8□□□□□ -1.13
LAMA3-213ENST00000592442 TMUB1Q9BVT8 246 aa8□□□□□ -1.13
LAMA3-213ENST00000592442 MS4A1P11836 297 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms