RNA–Protein interactions for RNA: ENST00000591338.1

LINC00662-208, long intergenic non-protein coding RNA 662, humanhuman

TSL 2

Gene LINC00662, Length 436 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-208ENST00000591338 ERVK-7P63135 1459 aa17.12■□□□□ 0.33
LINC00662-208ENST00000591338 UGGT1Q9NYU2 1555 aa17.12■□□□□ 0.33
LINC00662-208ENST00000591338 CEBPAP49715 358 aaPredicted RBP17.12■□□□□ 0.33
LINC00662-208ENST00000591338 SLC52A1Q9NWF4 448 aa17.12■□□□□ 0.33
LINC00662-208ENST00000591338 SYNMO15061 1565 aa17.11■□□□□ 0.33
LINC00662-208ENST00000591338 ADAMTSL3P82987 1691 aa17.11■□□□□ 0.33
LINC00662-208ENST00000591338 IDI1Q13907 227 aa17.11■□□□□ 0.33
LINC00662-208ENST00000591338 SPATA31E1Q6ZUB1 1445 aa17.1■□□□□ 0.33
LINC00662-208ENST00000591338 SPATA31D1Q6ZQQ2 1576 aa17.09■□□□□ 0.33
LINC00662-208ENST00000591338 KIF1BO60333 1816 aa17.09■□□□□ 0.33
LINC00662-208ENST00000591338 PIK3C2BO00750 1634 aa17.08■□□□□ 0.32
LINC00662-208ENST00000591338 MADDQ8WXG6 1647 aa17.08■□□□□ 0.32
LINC00662-208ENST00000591338 CHGAP10645 457 aaKnown RBP17.08■□□□□ 0.32
LINC00662-208ENST00000591338 DCAF11Q8TEB1 546 aa17.08■□□□□ 0.32
LINC00662-208ENST00000591338 C3P01024 1663 aa17.07■□□□□ 0.32
LINC00662-208ENST00000591338 KDM2AQ9Y2K7 1162 aa17.07■□□□□ 0.32
LINC00662-208ENST00000591338 RIMS1Q86UR5 1692 aaKnown RBP17.06■□□□□ 0.32
LINC00662-208ENST00000591338 NEURL4Q96JN8 1562 aa17.05■□□□□ 0.32
LINC00662-208ENST00000591338 TNRQ92752 1358 aa17.04■□□□□ 0.32
LINC00662-208ENST00000591338 NBPF8Q3BBV2 869 aa17.04■□□□□ 0.32
LINC00662-208ENST00000591338 ZNF326Q5BKZ1 582 aaKnown RBP17.03■□□□□ 0.32
LINC00662-208ENST00000591338 STAC3Q96MF2 364 aa17.02■□□□□ 0.32
LINC00662-208ENST00000591338 ADGRB3O60242 1522 aa17.01■□□□□ 0.31
LINC00662-208ENST00000591338 STAG3Q9UJ98 1225 aa17.01■□□□□ 0.31
LINC00662-208ENST00000591338 RPGRIP1LQ68CZ1 1315 aa17■□□□□ 0.31
LINC00662-208ENST00000591338 TMEM131LA2VDJ0 1609 aa16.99■□□□□ 0.31
LINC00662-208ENST00000591338 UHRF1BP1Q6BDS2 1440 aa16.99■□□□□ 0.31
LINC00662-208ENST00000591338 MYO5BQ9ULV0 1848 aa16.98■□□□□ 0.31
LINC00662-208ENST00000591338 PTPRMP28827 1452 aa16.96■□□□□ 0.31
LINC00662-208ENST00000591338 NLRP1Q9C000 1473 aa16.96■□□□□ 0.31
LINC00662-208ENST00000591338 A2ML1A8K2U0 1454 aa16.95■□□□□ 0.3
LINC00662-208ENST00000591338 PRAG1Q86YV5 1406 aa16.95■□□□□ 0.3
LINC00662-208ENST00000591338 IFT172Q9UG01 1749 aa16.94■□□□□ 0.3
LINC00662-208ENST00000591338 VGFO15240 615 aaPredicted RBP16.94■□□□□ 0.3
LINC00662-208ENST00000591338 SETD1BQ9UPS6 1966 aaKnown RBP16.94■□□□□ 0.3
LINC00662-208ENST00000591338 PPLO60437 1756 aa16.94■□□□□ 0.3
LINC00662-208ENST00000591338 ADGRF5Q8IZF2 1346 aa16.94■□□□□ 0.3
LINC00662-208ENST00000591338 NUTM2DQ5VT03 806 aaPredicted RBP16.93■□□□□ 0.3
LINC00662-208ENST00000591338 AKT1S1Q96B36 256 aa16.92■□□□□ 0.3
LINC00662-208ENST00000591338 MYOM2P54296 1465 aa16.92■□□□□ 0.3
LINC00662-208ENST00000591338 KDM5AP29375 1690 aaKnown RBP16.91■□□□□ 0.3
LINC00662-208ENST00000591338 NEXMIFQ5QGS0 1516 aa16.91■□□□□ 0.3
LINC00662-208ENST00000591338 UBR1Q8IWV7 1749 aa16.91■□□□□ 0.3
LINC00662-208ENST00000591338 ZFYVE9O95405 1425 aa16.89■□□□□ 0.29
LINC00662-208ENST00000591338 HDGFP51858 240 aaKnown RBP16.89■□□□□ 0.29
LINC00662-208ENST00000591338 MKRN4PQ13434 485 aaPredicted RBP16.89■□□□□ 0.29
LINC00662-208ENST00000591338 NBPF1Q3BBV0 1214 aa16.89■□□□□ 0.29
LINC00662-208ENST00000591338 THEMISQ8N1K5 641 aaPredicted RBP16.89■□□□□ 0.29
LINC00662-208ENST00000591338 MYO3AQ8NEV4 1616 aa16.88■□□□□ 0.29
LINC00662-208ENST00000591338 RIMS2Q9UQ26 1411 aa16.88■□□□□ 0.29
LINC00662-208ENST00000591338 RALGAPBQ86X10 1494 aa16.88■□□□□ 0.29
LINC00662-208ENST00000591338 NRXN1Q9ULB1 1477 aa16.88■□□□□ 0.29
LINC00662-208ENST00000591338 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.88■□□□□ 0.29
LINC00662-208ENST00000591338 TRPM1Q7Z4N2 1603 aa16.88■□□□□ 0.29
LINC00662-208ENST00000591338 CFAP70Q5T0N1 1121 aa16.87■□□□□ 0.29
LINC00662-208ENST00000591338 TMEM2Q9UHN6 1383 aa16.87■□□□□ 0.29
LINC00662-208ENST00000591338 CARD11Q9BXL7 1154 aa16.86■□□□□ 0.29
LINC00662-208ENST00000591338 C14orf93Q9H972 538 aaKnown RBP16.86■□□□□ 0.29
LINC00662-208ENST00000591338 ZNF316A6NFI3 1004 aaPredicted RBP16.85■□□□□ 0.29
LINC00662-208ENST00000591338 ROCK2O75116 1388 aaKnown RBP16.85■□□□□ 0.29
LINC00662-208ENST00000591338 CEP170BQ9Y4F5 1589 aaPredicted RBP16.85■□□□□ 0.29
LINC00662-208ENST00000591338 TXNDC2Q86VQ3 553 aa16.84■□□□□ 0.29
LINC00662-208ENST00000591338 PIK3C2GO75747 1445 aa16.84■□□□□ 0.29
LINC00662-208ENST00000591338 LTKP29376 864 aa16.83■□□□□ 0.28
LINC00662-208ENST00000591338 EIF4G2P78344 907 aaKnown RBP eCLIP16.83■□□□□ 0.28
LINC00662-208ENST00000591338 KIAA1210Q9ULL0 1709 aa16.83■□□□□ 0.28
LINC00662-208ENST00000591338 GPRASP1Q5JY77 1395 aa16.82■□□□□ 0.28
LINC00662-208ENST00000591338 SPDYE2BA6NHP3 402 aa16.82■□□□□ 0.28
LINC00662-208ENST00000591338 SPDYE6P0CI01 402 aa16.82■□□□□ 0.28
LINC00662-208ENST00000591338 HSPA5P11021 654 aaKnown RBP16.82■□□□□ 0.28
LINC00662-208ENST00000591338 SPDYE2Q495Y8 402 aa16.82■□□□□ 0.28
LINC00662-208ENST00000591338 HIRIP3Q9BW71 556 aaPredicted RBP16.82■□□□□ 0.28
LINC00662-208ENST00000591338 EID1Q9Y6B2 187 aa16.82■□□□□ 0.28
LINC00662-208ENST00000591338 SLIT1O75093 1534 aa16.81■□□□□ 0.28
LINC00662-208ENST00000591338 ARHGAP23Q9P227 1491 aa16.81■□□□□ 0.28
LINC00662-208ENST00000591338 ZNF142P52746 1687 aaPredicted RBP16.81■□□□□ 0.28
LINC00662-208ENST00000591338 TMEM132EQ6IEE7 984 aa16.78■□□□□ 0.28
LINC00662-208ENST00000591338 ILDR1Q86SU0 546 aaPredicted RBP16.78■□□□□ 0.28
LINC00662-208ENST00000591338 LAMC1P11047 1609 aa16.78■□□□□ 0.28
LINC00662-208ENST00000591338 USP47Q96K76 1375 aa16.77■□□□□ 0.28
LINC00662-208ENST00000591338 ANKLE2Q86XL3 938 aa16.76■□□□□ 0.27
LINC00662-208ENST00000591338 BCANQ96GW7 911 aa16.76■□□□□ 0.27
LINC00662-208ENST00000591338 ALKQ9UM73 1620 aa16.76■□□□□ 0.27
LINC00662-208ENST00000591338 SETBP1Q9Y6X0 1596 aa16.76■□□□□ 0.27
LINC00662-208ENST00000591338 PLEKHG1Q9ULL1 1385 aa16.76■□□□□ 0.27
LINC00662-208ENST00000591338 ST20-MTHFSA0A0A6YYL1 179 aa16.74■□□□□ 0.27
LINC00662-208ENST00000591338 SCAF11Q99590 1463 aaKnown RBP16.73■□□□□ 0.27
LINC00662-208ENST00000591338 ADGRB1O14514 1584 aa16.73■□□□□ 0.27
LINC00662-208ENST00000591338 POTEHQ6S545 545 aa16.73■□□□□ 0.27
LINC00662-208ENST00000591338 NRXN3Q9Y4C0 1643 aa16.72■□□□□ 0.27
LINC00662-208ENST00000591338 REM2Q8IYK8 340 aaPredicted RBP16.72■□□□□ 0.27
LINC00662-208ENST00000591338 TRAK1Q9UPV9 953 aa16.71■□□□□ 0.27
LINC00662-208ENST00000591338 IQGAP1P46940 1657 aa16.71■□□□□ 0.27
LINC00662-208ENST00000591338 ADAMTS13Q76LX8 1427 aa16.7■□□□□ 0.26
LINC00662-208ENST00000591338 CHRDL2Q6WN34 429 aa16.7■□□□□ 0.26
LINC00662-208ENST00000591338 SLC26A8Q96RN1 970 aa16.7■□□□□ 0.26
LINC00662-208ENST00000591338 TBX22Q9Y458 520 aa16.7■□□□□ 0.26
LINC00662-208ENST00000591338 STK26Q9P289 416 aa16.69■□□□□ 0.26
LINC00662-208ENST00000591338 SETD1AO15047 1707 aaKnown RBP16.69■□□□□ 0.26
LINC00662-208ENST00000591338 ASXL1Q8IXJ9 1541 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms