RNA–Protein interactions for RNA: ENST00000591303.2

PCSK4-211, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 3

Gene PCSK4, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-211ENST00000591303 LMTK2Q8IWU2 1503 aa30.88■■■□□ 2.53
PCSK4-211ENST00000591303 AHDC1Q5TGY3 1603 aaPredicted RBP30.86■■■□□ 2.53
PCSK4-211ENST00000591303 NOS1P29475 1434 aa30.85■■■□□ 2.53
PCSK4-211ENST00000591303 MEX3CQ5U5Q3 659 aaKnown RBP30.84■■■□□ 2.53
PCSK4-211ENST00000591303 RRP7BPQ9NSQ0 103 aa30.84■■■□□ 2.53
PCSK4-211ENST00000591303 MYO5BQ9ULV0 1848 aa30.83■■■□□ 2.53
PCSK4-211ENST00000591303 CDK12Q9NYV4 1490 aaPredicted RBP30.81■■■□□ 2.52
PCSK4-211ENST00000591303 ABCC5O15440 1437 aa30.81■■■□□ 2.52
PCSK4-211ENST00000591303 DIP2AQ14689 1571 aa30.8■■■□□ 2.52
PCSK4-211ENST00000591303 RXRBP28702 533 aa30.8■■■□□ 2.52
PCSK4-211ENST00000591303 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.8■■■□□ 2.52
PCSK4-211ENST00000591303 ZFYVE9O95405 1425 aa30.8■■■□□ 2.52
PCSK4-211ENST00000591303 KANK4Q5T7N3 995 aaPredicted RBP30.79■■■□□ 2.52
PCSK4-211ENST00000591303 KANK1Q14678 1352 aa30.78■■■□□ 2.52
PCSK4-211ENST00000591303 BCANQ96GW7 911 aa30.77■■■□□ 2.52
PCSK4-211ENST00000591303 PLEKHG1Q9ULL1 1385 aa30.76■■■□□ 2.51
PCSK4-211ENST00000591303 NCOA3Q9Y6Q9 1424 aa30.74■■■□□ 2.51
PCSK4-211ENST00000591303 GCC2Q8IWJ2 1684 aa30.71■■■□□ 2.51
PCSK4-211ENST00000591303 SLC52A1Q9NWF4 448 aa30.69■■■□□ 2.5
PCSK4-211ENST00000591303 RGS12O14924 1447 aa30.67■■■□□ 2.5
PCSK4-211ENST00000591303 DAPK1P53355 1430 aa30.67■■■□□ 2.5
PCSK4-211ENST00000591303 RIMS2Q9UQ26 1411 aa30.67■■■□□ 2.5
PCSK4-211ENST00000591303 TMEM131LA2VDJ0 1609 aa30.67■■■□□ 2.5
PCSK4-211ENST00000591303 PTPN23Q9H3S7 1636 aa30.67■■■□□ 2.5
PCSK4-211ENST00000591303 NUTM2BA6NNL0 878 aaPredicted RBP30.67■■■□□ 2.5
PCSK4-211ENST00000591303 NUTM2EB1AL46 878 aaPredicted RBP30.67■■■□□ 2.5
PCSK4-211ENST00000591303 NUTM2AQ8IVF1 878 aaPredicted RBP30.67■■■□□ 2.5
PCSK4-211ENST00000591303 AFF2P51816 1311 aa30.67■■■□□ 2.5
PCSK4-211ENST00000591303 VPS8Q8N3P4 1428 aa30.66■■■□□ 2.5
PCSK4-211ENST00000591303 CADPS2Q86UW7 1296 aa30.65■■■□□ 2.5
PCSK4-211ENST00000591303 TBX22Q9Y458 520 aa30.65■■■□□ 2.5
PCSK4-211ENST00000591303 ADAMTS13Q76LX8 1427 aa30.64■■■□□ 2.5
PCSK4-211ENST00000591303 BRINP3Q76B58 766 aa30.64■■■□□ 2.5
PCSK4-211ENST00000591303 C14orf37Q86TY3 774 aa30.63■■■□□ 2.49
PCSK4-211ENST00000591303 C19orf44Q9H6X5 657 aa30.63■■■□□ 2.49
PCSK4-211ENST00000591303 PPP1R15AO75807 674 aaPredicted RBP30.59■■■□□ 2.49
PCSK4-211ENST00000591303 ATF3P18847 181 aa30.59■■■□□ 2.49
PCSK4-211ENST00000591303 NHSL1Q5SYE7 1610 aa30.58■■■□□ 2.49
PCSK4-211ENST00000591303 ASXL1Q8IXJ9 1541 aa30.57■■■□□ 2.49
PCSK4-211ENST00000591303 RPRD2Q5VT52 1461 aaKnown RBP30.57■■■□□ 2.48
PCSK4-211ENST00000591303 SETD5Q9C0A6 1442 aa30.57■■■□□ 2.48
PCSK4-211ENST00000591303 CHIC2Q9UKJ5 165 aa30.56■■■□□ 2.48
PCSK4-211ENST00000591303 ANKRD30AQ9BXX3 1397 aa30.54■■■□□ 2.48
PCSK4-211ENST00000591303 PTPRUQ92729 1446 aa30.54■■■□□ 2.48
PCSK4-211ENST00000591303 PIK3R4Q99570 1358 aa30.53■■■□□ 2.48
PCSK4-211ENST00000591303 RBM6P78332 1123 aaKnown RBP30.51■■■□□ 2.47
PCSK4-211ENST00000591303 NUTM2DQ5VT03 806 aaPredicted RBP30.51■■■□□ 2.47
PCSK4-211ENST00000591303 QTRT2Q9H974 415 aaKnown RBP30.51■■■□□ 2.47
PCSK4-211ENST00000591303 EP400Q96L91 3159 aa30.51■■■□□ 2.47
PCSK4-211ENST00000591303 HDGFP51858 240 aaKnown RBP30.5■■■□□ 2.47
PCSK4-211ENST00000591303 C8orf37Q96NL8 207 aa30.48■■■□□ 2.47
PCSK4-211ENST00000591303 DCCP43146 1447 aa30.47■■■□□ 2.47
PCSK4-211ENST00000591303 MST1RQ04912 1400 aa30.47■■■□□ 2.47
PCSK4-211ENST00000591303 TRPM2O94759 1503 aa30.47■■■□□ 2.47
PCSK4-211ENST00000591303 PNPLA6Q8IY17 1366 aa30.45■■■□□ 2.47
PCSK4-211ENST00000591303 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.45■■■□□ 2.47
PCSK4-211ENST00000591303 AMOTL2Q9Y2J4 779 aa30.45■■■□□ 2.47
PCSK4-211ENST00000591303 SETBP1Q9Y6X0 1596 aa30.45■■■□□ 2.46
PCSK4-211ENST00000591303 XRN1Q8IZH2 1706 aaKnown RBP30.44■■■□□ 2.46
PCSK4-211ENST00000591303 UNC13BO14795 1591 aa30.44■■■□□ 2.46
PCSK4-211ENST00000591303 ADGRL2O95490 1459 aa30.44■■■□□ 2.46
PCSK4-211ENST00000591303 DDX17Q92841 729 aaKnown RBP30.43■■■□□ 2.46
PCSK4-211ENST00000591303 LRRC59Q96AG4 307 aaKnown RBP30.41■■■□□ 2.46
PCSK4-211ENST00000591303 CHGAP10645 457 aaKnown RBP30.4■■■□□ 2.46
PCSK4-211ENST00000591303 NRXN3Q9Y4C0 1643 aa30.4■■■□□ 2.46
PCSK4-211ENST00000591303 E9PCH4 1651 aa30.39■■■□□ 2.46
PCSK4-211ENST00000591303 ATAD2Q6PL18 1390 aa30.39■■■□□ 2.45
PCSK4-211ENST00000591303 ANKRD50Q9ULJ7 1429 aa30.36■■■□□ 2.45
PCSK4-211ENST00000591303 ADAMTS2O95450 1211 aa30.32■■■□□ 2.44
PCSK4-211ENST00000591303 NGLY1Q96IV0 654 aa30.32■■■□□ 2.44
PCSK4-211ENST00000591303 ZRANB1Q9UGI0 708 aa30.32■■■□□ 2.44
PCSK4-211ENST00000591303 NALCNQ8IZF0 1738 aa30.31■■■□□ 2.44
PCSK4-211ENST00000591303 LAMC1P11047 1609 aa30.29■■■□□ 2.44
PCSK4-211ENST00000591303 ADGRL3Q9HAR2 1447 aa30.26■■■□□ 2.43
PCSK4-211ENST00000591303 METP08581 1390 aa30.25■■■□□ 2.43
PCSK4-211ENST00000591303 USP21Q9UK80 565 aa30.24■■■□□ 2.43
PCSK4-211ENST00000591303 ATRNO75882 1429 aa30.23■■■□□ 2.43
PCSK4-211ENST00000591303 LOC105371045A0A1W2PR82 267 aa30.22■■■□□ 2.43
PCSK4-211ENST00000591303 TRPC5Q9UL62 973 aaPredicted RBP30.21■■■□□ 2.43
PCSK4-211ENST00000591303 FNBP4Q8N3X1 1017 aaPredicted RBP30.2■■■□□ 2.43
PCSK4-211ENST00000591303 IQGAP3Q86VI3 1631 aa30.2■■■□□ 2.43
PCSK4-211ENST00000591303 C1orf167Q5SNV9 1468 aa30.19■■■□□ 2.42
PCSK4-211ENST00000591303 SOS2Q07890 1332 aaPredicted RBP30.17■■■□□ 2.42
PCSK4-211ENST00000591303 PTCH1Q13635 1447 aa30.16■■■□□ 2.42
PCSK4-211ENST00000591303 COL22A1Q8NFW1 1626 aaPredicted RBP30.16■■■□□ 2.42
PCSK4-211ENST00000591303 FOXD1Q16676 465 aa30.16■■■□□ 2.42
PCSK4-211ENST00000591303 CCDC125Q86Z20 511 aa30.12■■■□□ 2.41
PCSK4-211ENST00000591303 ORAI2Q96SN7 254 aa30.11■■■□□ 2.41
PCSK4-211ENST00000591303 BCL9LQ86UU0 1499 aa30.11■■■□□ 2.41
PCSK4-211ENST00000591303 MARF1Q9Y4F3 1742 aaKnown RBP30.1■■■□□ 2.41
PCSK4-211ENST00000591303 FAM50AQ14320 339 aaKnown RBP30.09■■■□□ 2.41
PCSK4-211ENST00000591303 MYOM2P54296 1465 aa30.07■■■□□ 2.4
PCSK4-211ENST00000591303 APLP2Q06481 763 aa30.05■■■□□ 2.4
PCSK4-211ENST00000591303 SPHKAPQ2M3C7 1700 aa30.05■■■□□ 2.4
PCSK4-211ENST00000591303 LRP5O75197 1615 aa30.04■■■□□ 2.4
PCSK4-211ENST00000591303 NEXMIFQ5QGS0 1516 aa30.03■■■□□ 2.4
PCSK4-211ENST00000591303 BRWD3Q6RI45 1802 aa30■■■□□ 2.39
PCSK4-211ENST00000591303 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.99■■■□□ 2.39
PCSK4-211ENST00000591303 GLI3P10071 1580 aa29.99■■■□□ 2.39
PCSK4-211ENST00000591303 BLMP54132 1417 aaPredicted RBP29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms