RNA–Protein interactions for RNA: ENST00000590563.1

LSM12-203, Transcript of LSM12 homolog, humanhuman

TSL 2

Gene LSM12, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-203ENST00000590563 AFF2P51816 1311 aa21.55■■□□□ 1.04
LSM12-203ENST00000590563 SETBP1Q9Y6X0 1596 aa21.54■■□□□ 1.04
LSM12-203ENST00000590563 STAG3Q9UJ98 1225 aa21.54■■□□□ 1.04
LSM12-203ENST00000590563 NCOA3Q9Y6Q9 1424 aa21.54■■□□□ 1.04
LSM12-203ENST00000590563 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.52■■□□□ 1.03
LSM12-203ENST00000590563 LMTK2Q8IWU2 1503 aa21.51■■□□□ 1.03
LSM12-203ENST00000590563 ZFYVE9O95405 1425 aa21.5■■□□□ 1.03
LSM12-203ENST00000590563 NOS1P29475 1434 aa21.5■■□□□ 1.03
LSM12-203ENST00000590563 ERBINQ96RT1 1412 aa21.5■■□□□ 1.03
LSM12-203ENST00000590563 NUTM2BA6NNL0 878 aaPredicted RBP21.49■■□□□ 1.03
LSM12-203ENST00000590563 NUTM2EB1AL46 878 aaPredicted RBP21.49■■□□□ 1.03
LSM12-203ENST00000590563 NUTM2AQ8IVF1 878 aaPredicted RBP21.49■■□□□ 1.03
LSM12-203ENST00000590563 PLEKHG1Q9ULL1 1385 aa21.48■■□□□ 1.03
LSM12-203ENST00000590563 KIF15Q9NS87 1388 aa21.47■■□□□ 1.03
LSM12-203ENST00000590563 RBM6P78332 1123 aaKnown RBP21.46■■□□□ 1.03
LSM12-203ENST00000590563 SETD5Q9C0A6 1442 aa21.46■■□□□ 1.03
LSM12-203ENST00000590563 BRINP3Q76B58 766 aa21.45■■□□□ 1.02
LSM12-203ENST00000590563 CADPS2Q86UW7 1296 aa21.44■■□□□ 1.02
LSM12-203ENST00000590563 ASXL1Q8IXJ9 1541 aa21.44■■□□□ 1.02
LSM12-203ENST00000590563 NUTM2DQ5VT03 806 aaPredicted RBP21.43■■□□□ 1.02
LSM12-203ENST00000590563 NHSL1Q5SYE7 1610 aa21.42■■□□□ 1.02
LSM12-203ENST00000590563 ATAD2Q6PL18 1390 aa21.42■■□□□ 1.02
LSM12-203ENST00000590563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.42■■□□□ 1.02
LSM12-203ENST00000590563 QTRT2Q9H974 415 aaKnown RBP21.42■■□□□ 1.02
LSM12-203ENST00000590563 BCANQ96GW7 911 aa21.41■■□□□ 1.02
LSM12-203ENST00000590563 C19orf44Q9H6X5 657 aa21.41■■□□□ 1.02
LSM12-203ENST00000590563 CROCC2H7BZ55 1655 aa21.4■■□□□ 1.02
LSM12-203ENST00000590563 ADAMTS13Q76LX8 1427 aa21.4■■□□□ 1.02
LSM12-203ENST00000590563 ZRANB1Q9UGI0 708 aa21.4■■□□□ 1.02
LSM12-203ENST00000590563 MYOM3Q5VTT5 1437 aa21.39■■□□□ 1.02
LSM12-203ENST00000590563 RIMS2Q9UQ26 1411 aa21.39■■□□□ 1.02
LSM12-203ENST00000590563 C8orf37Q96NL8 207 aa21.39■■□□□ 1.01
LSM12-203ENST00000590563 KANK1Q14678 1352 aa21.38■■□□□ 1.01
LSM12-203ENST00000590563 ATF3P18847 181 aa21.38■■□□□ 1.01
LSM12-203ENST00000590563 C14orf37Q86TY3 774 aa21.38■■□□□ 1.01
LSM12-203ENST00000590563 TBX22Q9Y458 520 aa21.38■■□□□ 1.01
LSM12-203ENST00000590563 MYO5BQ9ULV0 1848 aa21.38■■□□□ 1.01
LSM12-203ENST00000590563 PNPLA6Q8IY17 1366 aa21.36■■□□□ 1.01
LSM12-203ENST00000590563 GCC2Q8IWJ2 1684 aa21.36■■□□□ 1.01
LSM12-203ENST00000590563 ABCC5O15440 1437 aa21.36■■□□□ 1.01
LSM12-203ENST00000590563 RRP7BPQ9NSQ0 103 aa21.35■■□□□ 1.01
LSM12-203ENST00000590563 SLC52A1Q9NWF4 448 aa21.35■■□□□ 1.01
LSM12-203ENST00000590563 TMEM131LA2VDJ0 1609 aa21.35■■□□□ 1.01
LSM12-203ENST00000590563 DCCP43146 1447 aa21.35■■□□□ 1.01
LSM12-203ENST00000590563 MST1RQ04912 1400 aa21.34■■□□□ 1.01
LSM12-203ENST00000590563 PTPRUQ92729 1446 aa21.32■■□□□ 1
LSM12-203ENST00000590563 PIK3R4Q99570 1358 aa21.32■■□□□ 1
LSM12-203ENST00000590563 PPP1R15AO75807 674 aaPredicted RBP21.3■■□□□ 1
LSM12-203ENST00000590563 FOXD1Q16676 465 aa21.29■■□□□ 1
LSM12-203ENST00000590563 NGLY1Q96IV0 654 aa21.29■■□□□ 1
LSM12-203ENST00000590563 LRRC59Q96AG4 307 aaKnown RBP21.28■■□□□ 1
LSM12-203ENST00000590563 TRPM2O94759 1503 aa21.28■■□□□ 1
LSM12-203ENST00000590563 RPRD2Q5VT52 1461 aaKnown RBP21.27■■□□□ 1
LSM12-203ENST00000590563 DDX17Q92841 729 aaKnown RBP21.27■■□□□ 1
LSM12-203ENST00000590563 EP400Q96L91 3159 aa21.27■■□□□ 1
LSM12-203ENST00000590563 XRN1Q8IZH2 1706 aaKnown RBP21.26■□□□□ 0.99
LSM12-203ENST00000590563 LRP5O75197 1615 aa21.26■□□□□ 0.99
LSM12-203ENST00000590563 ATRNO75882 1429 aa21.26■□□□□ 0.99
LSM12-203ENST00000590563 DAPK1P53355 1430 aa21.26■□□□□ 0.99
LSM12-203ENST00000590563 ADAMTS2O95450 1211 aa21.23■□□□□ 0.99
LSM12-203ENST00000590563 KANK4Q5T7N3 995 aaPredicted RBP21.22■□□□□ 0.99
LSM12-203ENST00000590563 AMOTL2Q9Y2J4 779 aa21.22■□□□□ 0.99
LSM12-203ENST00000590563 UNC13BO14795 1591 aa21.22■□□□□ 0.99
LSM12-203ENST00000590563 HDGFP51858 240 aaKnown RBP21.21■□□□□ 0.99
LSM12-203ENST00000590563 USP21Q9UK80 565 aa21.21■□□□□ 0.99
LSM12-203ENST00000590563 TRPC5Q9UL62 973 aaPredicted RBP21.21■□□□□ 0.99
LSM12-203ENST00000590563 LAMC1P11047 1609 aa21.21■□□□□ 0.99
LSM12-203ENST00000590563 PTPN23Q9H3S7 1636 aa21.2■□□□□ 0.98
LSM12-203ENST00000590563 CCDC125Q86Z20 511 aa21.2■□□□□ 0.98
LSM12-203ENST00000590563 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.2■□□□□ 0.98
LSM12-203ENST00000590563 FNBP4Q8N3X1 1017 aaPredicted RBP21.19■□□□□ 0.98
LSM12-203ENST00000590563 NRXN3Q9Y4C0 1643 aa21.18■□□□□ 0.98
LSM12-203ENST00000590563 PTCH1Q13635 1447 aa21.17■□□□□ 0.98
LSM12-203ENST00000590563 NALCNQ8IZF0 1738 aa21.15■□□□□ 0.98
LSM12-203ENST00000590563 ADGRL3Q9HAR2 1447 aa21.15■□□□□ 0.98
LSM12-203ENST00000590563 ANKRD30AQ9BXX3 1397 aa21.15■□□□□ 0.98
LSM12-203ENST00000590563 COL22A1Q8NFW1 1626 aaPredicted RBP21.14■□□□□ 0.97
LSM12-203ENST00000590563 BCL9LQ86UU0 1499 aa21.13■□□□□ 0.97
LSM12-203ENST00000590563 BLMP54132 1417 aaPredicted RBP21.12■□□□□ 0.97
LSM12-203ENST00000590563 VPS8Q8N3P4 1428 aa21.12■□□□□ 0.97
LSM12-203ENST00000590563 C1orf167Q5SNV9 1468 aa21.12■□□□□ 0.97
LSM12-203ENST00000590563 CHIC2Q9UKJ5 165 aa21.11■□□□□ 0.97
LSM12-203ENST00000590563 SOS2Q07890 1332 aaPredicted RBP21.1■□□□□ 0.97
LSM12-203ENST00000590563 ADGRL2O95490 1459 aa21.1■□□□□ 0.97
LSM12-203ENST00000590563 MYOM2P54296 1465 aa21.1■□□□□ 0.97
LSM12-203ENST00000590563 CHGAP10645 457 aaKnown RBP21.1■□□□□ 0.97
LSM12-203ENST00000590563 DEFB132Q7Z7B7 95 aa21.08■□□□□ 0.97
LSM12-203ENST00000590563 METP08581 1390 aa21.08■□□□□ 0.96
LSM12-203ENST00000590563 E9PCH4 1651 aa21.07■□□□□ 0.96
LSM12-203ENST00000590563 GLI3P10071 1580 aa21.06■□□□□ 0.96
LSM12-203ENST00000590563 GJD4Q96KN9 370 aaPredicted RBP21.03■□□□□ 0.96
LSM12-203ENST00000590563 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.03■□□□□ 0.96
LSM12-203ENST00000590563 MARF1Q9Y4F3 1742 aaKnown RBP21.03■□□□□ 0.96
LSM12-203ENST00000590563 ANKRD50Q9ULJ7 1429 aa21.03■□□□□ 0.96
LSM12-203ENST00000590563 SPHKAPQ2M3C7 1700 aa21.02■□□□□ 0.96
LSM12-203ENST00000590563 IQGAP3Q86VI3 1631 aa21.01■□□□□ 0.95
LSM12-203ENST00000590563 ORAI2Q96SN7 254 aa21.01■□□□□ 0.95
LSM12-203ENST00000590563 RALGAPBQ86X10 1494 aa21.01■□□□□ 0.95
LSM12-203ENST00000590563 BRWD3Q6RI45 1802 aa20.99■□□□□ 0.95
LSM12-203ENST00000590563 HRCP23327 699 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms