RNA–Protein interactions for RNA: ENST00000590526.5

RTN2-208, Transcript of reticulon 2, human

TSL 5 BASIC

Gene RTN2, Length 2,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTN2-208	ENST00000590526	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.64	■■■□□ 2.98
RTN2-208	ENST00000590526	NOS1	P29475	1434 aa		33.61	■■■□□ 2.97
RTN2-208	ENST00000590526	FKBP8	Q14318	412 aa		33.61	■■■□□ 2.97
RTN2-208	ENST00000590526	TMF1	P82094	1093 aa		33.6	■■■□□ 2.97
RTN2-208	ENST00000590526	PANK3	Q9H999	370 aa		33.58	■■■□□ 2.97
RTN2-208	ENST00000590526	ADGRB3	O60242	1522 aa		33.57	■■■□□ 2.96
RTN2-208	ENST00000590526	PER1	O15534	1290 aa	Predicted RBP	33.56	■■■□□ 2.96
RTN2-208	ENST00000590526	SCAF11	Q99590	1463 aa	Known RBP	33.56	■■■□□ 2.96
RTN2-208	ENST00000590526	CC2D1B	Q5T0F9	858 aa	Known RBP	33.56	■■■□□ 2.96
RTN2-208	ENST00000590526	SYNM	O15061	1565 aa		33.53	■■■□□ 2.96
RTN2-208	ENST00000590526	MYOM2	P54296	1465 aa		33.52	■■■□□ 2.96
RTN2-208	ENST00000590526	PPL	O60437	1756 aa		33.51	■■■□□ 2.96
RTN2-208	ENST00000590526	NEURL4	Q96JN8	1562 aa		33.51	■■■□□ 2.96
RTN2-208	ENST00000590526	KIAA1210	Q9ULL0	1709 aa		33.51	■■■□□ 2.95
RTN2-208	ENST00000590526	TMC1	Q8TDI8	760 aa		33.5	■■■□□ 2.95
RTN2-208	ENST00000590526	KIF13A	Q9H1H9	1805 aa		33.49	■■■□□ 2.95
RTN2-208	ENST00000590526	MYO5B	Q9ULV0	1848 aa		33.48	■■■□□ 2.95
RTN2-208	ENST00000590526	TMEM132E	Q6IEE7	984 aa		33.47	■■■□□ 2.95
RTN2-208	ENST00000590526	STAC3	Q96MF2	364 aa		33.47	■■■□□ 2.95
RTN2-208	ENST00000590526	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.45	■■■□□ 2.95
RTN2-208	ENST00000590526	PNISR	Q8TF01	805 aa	Known RBP	33.45	■■■□□ 2.95
RTN2-208	ENST00000590526	MYBBP1A	Q9BQG0	1328 aa	Known RBP	33.45	■■■□□ 2.95
RTN2-208	ENST00000590526	IRX6	P78412	446 aa	Predicted RBP	33.45	■■■□□ 2.94
RTN2-208	ENST00000590526	IDI1	Q13907	227 aa		33.43	■■■□□ 2.94
RTN2-208	ENST00000590526	MLEC	Q14165	292 aa		33.43	■■■□□ 2.94
RTN2-208	ENST00000590526	KTN1	Q86UP2	1357 aa	Known RBP	33.43	■■■□□ 2.94
RTN2-208	ENST00000590526	ZMYM4	Q5VZL5	1548 aa		33.42	■■■□□ 2.94
RTN2-208	ENST00000590526	NRXN1	Q9ULB1	1477 aa		33.42	■■■□□ 2.94
RTN2-208	ENST00000590526	TRAK1	Q9UPV9	953 aa		33.41	■■■□□ 2.94
RTN2-208	ENST00000590526	RALBP1	Q15311	655 aa		33.41	■■■□□ 2.94
RTN2-208	ENST00000590526	PIK3C2B	O00750	1634 aa		33.4	■■■□□ 2.94
RTN2-208	ENST00000590526	PARD3	Q8TEW0	1356 aa		33.4	■■■□□ 2.94
RTN2-208	ENST00000590526	ZBED9	Q6R2W3	1325 aa		33.38	■■■□□ 2.93
RTN2-208	ENST00000590526	BCL11A	Q9H165	835 aa		33.38	■■■□□ 2.93
RTN2-208	ENST00000590526	MYOM1	P52179	1685 aa		33.37	■■■□□ 2.93
RTN2-208	ENST00000590526	ZC3H13	Q5T200	1668 aa	Known RBP	33.37	■■■□□ 2.93
RTN2-208	ENST00000590526	PIK3C2G	O75747	1445 aa		33.36	■■■□□ 2.93
RTN2-208	ENST00000590526	PREX1	Q8TCU6	1659 aa		33.36	■■■□□ 2.93
RTN2-208	ENST00000590526	EIF3A	Q14152	1382 aa	Known RBP	33.34	■■■□□ 2.93
RTN2-208	ENST00000590526	NEFL	P07196	543 aa		33.33	■■■□□ 2.93
RTN2-208	ENST00000590526	ERVK-7	P63135	1459 aa		33.31	■■■□□ 2.92
RTN2-208	ENST00000590526	BRD4	O60885	1362 aa	Predicted RBP	33.31	■■■□□ 2.92
RTN2-208	ENST00000590526	C14orf93	Q9H972	538 aa	Known RBP	33.31	■■■□□ 2.92
RTN2-208	ENST00000590526	NEXMIF	Q5QGS0	1516 aa		33.3	■■■□□ 2.92
RTN2-208	ENST00000590526	ARHGAP31	Q2M1Z3	1444 aa		33.3	■■■□□ 2.92
RTN2-208	ENST00000590526	KDM5A	P29375	1690 aa	Known RBP	33.3	■■■□□ 2.92
RTN2-208	ENST00000590526	SALL2	Q9Y467	1007 aa	Predicted RBP	33.28	■■■□□ 2.92
RTN2-208	ENST00000590526	CLTC	Q00610	1675 aa	Known RBP	33.28	■■■□□ 2.92
RTN2-208	ENST00000590526	NLRP13	Q86W25	1043 aa		33.28	■■■□□ 2.92
RTN2-208	ENST00000590526	ADGRB1	O14514	1584 aa		33.27	■■■□□ 2.92
RTN2-208	ENST00000590526	KNSTRN	Q9Y448	316 aa		33.24	■■■□□ 2.91
RTN2-208	ENST00000590526	LRPPRC	P42704	1394 aa	Known RBP	33.23	■■■□□ 2.91
RTN2-208	ENST00000590526	CENPJ	Q9HC77	1338 aa	Predicted RBP	33.23	■■■□□ 2.91
RTN2-208	ENST00000590526	SETBP1	Q9Y6X0	1596 aa		33.22	■■■□□ 2.91
RTN2-208	ENST00000590526	QRICH2	Q9H0J4	1663 aa		33.22	■■■□□ 2.91
RTN2-208	ENST00000590526	RPGRIP1L	Q68CZ1	1315 aa		33.22	■■■□□ 2.91
RTN2-208	ENST00000590526	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.21	■■■□□ 2.91
RTN2-208	ENST00000590526	CDCA8	Q53HL2	280 aa		33.21	■■■□□ 2.91
RTN2-208	ENST00000590526	AMER1	Q5JTC6	1135 aa	Predicted RBP	33.21	■■■□□ 2.91
RTN2-208	ENST00000590526	TMEM131L	A2VDJ0	1609 aa		33.2	■■■□□ 2.91
RTN2-208	ENST00000590526	MYO3A	Q8NEV4	1616 aa		33.2	■■■□□ 2.9
RTN2-208	ENST00000590526	STK26	Q9P289	416 aa		33.18	■■■□□ 2.9
RTN2-208	ENST00000590526	VGF	O15240	615 aa	Predicted RBP	33.18	■■■□□ 2.9
RTN2-208	ENST00000590526	SLC52A1	Q9NWF4	448 aa		33.18	■■■□□ 2.9
RTN2-208	ENST00000590526	CARD14	Q9BXL6	1004 aa		33.15	■■■□□ 2.9
RTN2-208	ENST00000590526	ANP32E	Q9BTT0	268 aa		33.13	■■■□□ 2.89
RTN2-208	ENST00000590526	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.11	■■■□□ 2.89
RTN2-208	ENST00000590526	PPP2R1A	P30153	589 aa		33.11	■■■□□ 2.89
RTN2-208	ENST00000590526	STAG3	Q9UJ98	1225 aa		33.11	■■■□□ 2.89
RTN2-208	ENST00000590526	RERE	Q9P2R6	1566 aa		33.11	■■■□□ 2.89
RTN2-208	ENST00000590526	ASXL1	Q8IXJ9	1541 aa		33.11	■■■□□ 2.89
RTN2-208	ENST00000590526	AGL	P35573	1532 aa		33.1	■■■□□ 2.89
RTN2-208	ENST00000590526	ARHGEF40	Q8TER5	1519 aa		33.1	■■■□□ 2.89
RTN2-208	ENST00000590526	SLC12A5	Q9H2X9	1139 aa		33.09	■■■□□ 2.89
RTN2-208	ENST00000590526	SBNO2	Q9Y2G9	1366 aa		33.03	■■■□□ 2.88
RTN2-208	ENST00000590526	NUDC	Q9Y266	331 aa		33.02	■■■□□ 2.88
RTN2-208	ENST00000590526	SMG6	Q86US8	1419 aa	Known RBP	33.02	■■■□□ 2.88
RTN2-208	ENST00000590526	CABP2	Q9NPB3	220 aa		33	■■■□□ 2.87
RTN2-208	ENST00000590526	ADAMTS8	Q9UP79	889 aa		33	■■■□□ 2.87
RTN2-208	ENST00000590526	TULP4	Q9NRJ4	1543 aa		32.98	■■■□□ 2.87
RTN2-208	ENST00000590526	TNNT2	P45379	298 aa	Predicted RBP	32.95	■■■□□ 2.87
RTN2-208	ENST00000590526	CDCA7L	Q96GN5	454 aa		32.95	■■■□□ 2.87
RTN2-208	ENST00000590526	ZFYVE9	O95405	1425 aa		32.95	■■■□□ 2.87
RTN2-208	ENST00000590526	SPATA31D1	Q6ZQQ2	1576 aa		32.94	■■■□□ 2.86
RTN2-208	ENST00000590526	NSD3	Q9BZ95	1437 aa		32.94	■■■□□ 2.86
RTN2-208	ENST00000590526	A2ML1	A8K2U0	1454 aa		32.93	■■■□□ 2.86
RTN2-208	ENST00000590526	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.93	■■■□□ 2.86
RTN2-208	ENST00000590526	ESF1	Q9H501	851 aa	Known RBP	32.93	■■■□□ 2.86
RTN2-208	ENST00000590526	ZMYM3	Q14202	1370 aa		32.93	■■■□□ 2.86
RTN2-208	ENST00000590526	PLPPR3	Q6T4P5	718 aa		32.91	■■■□□ 2.86
RTN2-208	ENST00000590526	PRAM1	Q96QH2	718 aa		32.91	■■■□□ 2.86
RTN2-208	ENST00000590526	ALK	Q9UM73	1620 aa		32.91	■■■□□ 2.86
RTN2-208	ENST00000590526	SLC24A1	O60721	1099 aa		32.9	■■■□□ 2.86
RTN2-208	ENST00000590526	PPP6R1	Q9UPN7	881 aa		32.9	■■■□□ 2.86
RTN2-208	ENST00000590526	BLM	P54132	1417 aa	Predicted RBP	32.89	■■■□□ 2.86
RTN2-208	ENST00000590526	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.87	■■■□□ 2.85
RTN2-208	ENST00000590526	PTPRM	P28827	1452 aa		32.87	■■■□□ 2.85
RTN2-208	ENST00000590526	EVC2	Q86UK5	1308 aa		32.87	■■■□□ 2.85
RTN2-208	ENST00000590526	CCDC146	Q8IYE0	955 aa		32.85	■■■□□ 2.85
RTN2-208	ENST00000590526	NPC1L1	Q9UHC9	1359 aa		32.85	■■■□□ 2.85

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms