RNA–Protein interactions for RNA: ENST00000590116.5

ZNF554-203, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 2,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-203ENST00000590116 CDCA8Q53HL2 280 aa27.56■■■□□ 2
ZNF554-203ENST00000590116 UGGT1Q9NYU2 1555 aa27.56■■■□□ 2
ZNF554-203ENST00000590116 C20orf194Q5TEA3 1177 aa27.56■■■□□ 2
ZNF554-203ENST00000590116 SYNMO15061 1565 aa27.55■■■□□ 2
ZNF554-203ENST00000590116 MYOM1P52179 1685 aa27.55■■■□□ 2
ZNF554-203ENST00000590116 TCERG1O14776 1098 aaKnown RBP27.55■■■□□ 2
ZNF554-203ENST00000590116 WDR43Q15061 677 aaKnown RBP eCLIP27.55■■■□□ 2
ZNF554-203ENST00000590116 SCAPERQ9BY12 1400 aa27.55■■■□□ 2
ZNF554-203ENST00000590116 TET3O43151 1660 aa27.55■■■□□ 2
ZNF554-203ENST00000590116 KIF3BO15066 747 aa27.55■■■□□ 2
ZNF554-203ENST00000590116 ARAP3Q8WWN8 1544 aa27.54■■■□□ 2
ZNF554-203ENST00000590116 ATP7AQ04656 1500 aa27.53■■■□□ 2
ZNF554-203ENST00000590116 STAC3Q96MF2 364 aa27.52■■■□□ 2
ZNF554-203ENST00000590116 KANK1Q14678 1352 aa27.51■■■□□ 2
ZNF554-203ENST00000590116 FANCAO15360 1455 aa27.51■■□□□ 1.99
ZNF554-203ENST00000590116 ASXL1Q8IXJ9 1541 aa27.5■■□□□ 1.99
ZNF554-203ENST00000590116 PDE4AP27815 886 aa27.5■■□□□ 1.99
ZNF554-203ENST00000590116 INO80Q9ULG1 1556 aaPredicted RBP27.5■■□□□ 1.99
ZNF554-203ENST00000590116 ZBTB47Q9UFB7 747 aaPredicted RBP27.5■■□□□ 1.99
ZNF554-203ENST00000590116 CFAP70Q5T0N1 1121 aa27.49■■□□□ 1.99
ZNF554-203ENST00000590116 CCDC146Q8IYE0 955 aa27.48■■□□□ 1.99
ZNF554-203ENST00000590116 EIF3AQ14152 1382 aaKnown RBP27.48■■□□□ 1.99
ZNF554-203ENST00000590116 ABCA9Q8IUA7 1624 aa27.46■■□□□ 1.99
ZNF554-203ENST00000590116 DUSP27Q5VZP5 1158 aa27.46■■□□□ 1.99
ZNF554-203ENST00000590116 VWDEQ8N2E2 1590 aa27.45■■□□□ 1.99
ZNF554-203ENST00000590116 ADGRF5Q8IZF2 1346 aa27.45■■□□□ 1.98
ZNF554-203ENST00000590116 KDM5AP29375 1690 aaKnown RBP27.45■■□□□ 1.98
ZNF554-203ENST00000590116 DEKP35659 375 aaKnown RBP27.44■■□□□ 1.98
ZNF554-203ENST00000590116 ABCA6Q8N139 1617 aa27.44■■□□□ 1.98
ZNF554-203ENST00000590116 ADGRL1O94910 1474 aa27.44■■□□□ 1.98
ZNF554-203ENST00000590116 MROH1Q8NDA8 1641 aa27.43■■□□□ 1.98
ZNF554-203ENST00000590116 BACH2Q9BYV9 841 aa27.43■■□□□ 1.98
ZNF554-203ENST00000590116 MS4A1P11836 297 aa27.42■■□□□ 1.98
ZNF554-203ENST00000590116 PIK3C2GO75747 1445 aa27.42■■□□□ 1.98
ZNF554-203ENST00000590116 ZNF521Q96K83 1311 aa27.41■■□□□ 1.98
ZNF554-203ENST00000590116 KIAA1210Q9ULL0 1709 aa27.4■■□□□ 1.98
ZNF554-203ENST00000590116 MAP3K4Q9Y6R4 1608 aa27.4■■□□□ 1.98
ZNF554-203ENST00000590116 GOLGA2Q08379 1002 aa27.39■■□□□ 1.98
ZNF554-203ENST00000590116 ERVK-7P63135 1459 aa27.39■■□□□ 1.98
ZNF554-203ENST00000590116 MROH2AA6NES4 1674 aa27.38■■□□□ 1.97
ZNF554-203ENST00000590116 NPC1L1Q9UHC9 1359 aa27.38■■□□□ 1.97
ZNF554-203ENST00000590116 SPINK5Q9NQ38 1064 aaPredicted RBP27.36■■□□□ 1.97
ZNF554-203ENST00000590116 CARD14Q9BXL6 1004 aa27.35■■□□□ 1.97
ZNF554-203ENST00000590116 KIF1BO60333 1816 aa27.35■■□□□ 1.97
ZNF554-203ENST00000590116 NEURL4Q96JN8 1562 aa27.34■■□□□ 1.97
ZNF554-203ENST00000590116 APAF1O14727 1248 aa27.34■■□□□ 1.97
ZNF554-203ENST00000590116 MYOM2P54296 1465 aa27.34■■□□□ 1.97
ZNF554-203ENST00000590116 PPRC1Q5VV67 1664 aaKnown RBP27.33■■□□□ 1.97
ZNF554-203ENST00000590116 EFCAB6Q5THR3 1501 aa27.33■■□□□ 1.97
ZNF554-203ENST00000590116 CHGAP10645 457 aaKnown RBP27.32■■□□□ 1.96
ZNF554-203ENST00000590116 SLFN5Q08AF3 891 aa27.32■■□□□ 1.96
ZNF554-203ENST00000590116 KDM2BQ8NHM5 1336 aa27.31■■□□□ 1.96
ZNF554-203ENST00000590116 IFT172Q9UG01 1749 aa27.31■■□□□ 1.96
ZNF554-203ENST00000590116 KIDINS220Q9ULH0 1771 aa27.3■■□□□ 1.96
ZNF554-203ENST00000590116 CFAP65Q6ZU64 1925 aaKnown RBP27.29■■□□□ 1.96
ZNF554-203ENST00000590116 DMRT2Q9Y5R5 561 aa27.29■■□□□ 1.96
ZNF554-203ENST00000590116 ASXL2Q76L83 1435 aa27.29■■□□□ 1.96
ZNF554-203ENST00000590116 SLC24A1O60721 1099 aa27.28■■□□□ 1.96
ZNF554-203ENST00000590116 LAS1LQ9Y4W2 734 aaKnown RBP27.28■■□□□ 1.96
ZNF554-203ENST00000590116 NOS1P29475 1434 aa27.27■■□□□ 1.96
ZNF554-203ENST00000590116 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.26■■□□□ 1.95
ZNF554-203ENST00000590116 RTL5Q5HYW3 569 aaPredicted RBP27.24■■□□□ 1.95
ZNF554-203ENST00000590116 BCAR3O75815 825 aa27.24■■□□□ 1.95
ZNF554-203ENST00000590116 CENPQQ7L2Z9 268 aaPredicted RBP27.23■■□□□ 1.95
ZNF554-203ENST00000590116 TRMT2AQ8IZ69 625 aaKnown RBP27.23■■□□□ 1.95
ZNF554-203ENST00000590116 TRAK1Q9UPV9 953 aa27.23■■□□□ 1.95
ZNF554-203ENST00000590116 TNNT2P45379 298 aaPredicted RBP27.23■■□□□ 1.95
ZNF554-203ENST00000590116 NKTRP30414 1462 aaKnown RBP27.21■■□□□ 1.95
ZNF554-203ENST00000590116 NRXN1Q9ULB1 1477 aa27.2■■□□□ 1.95
ZNF554-203ENST00000590116 CENPJQ9HC77 1338 aaPredicted RBP27.19■■□□□ 1.94
ZNF554-203ENST00000590116 MYO3AQ8NEV4 1616 aa27.19■■□□□ 1.94
ZNF554-203ENST00000590116 ADGRB3O60242 1522 aa27.19■■□□□ 1.94
ZNF554-203ENST00000590116 TMEM132EQ6IEE7 984 aa27.18■■□□□ 1.94
ZNF554-203ENST00000590116 NSD3Q9BZ95 1437 aa27.18■■□□□ 1.94
ZNF554-203ENST00000590116 GGT6Q6P531 493 aa27.17■■□□□ 1.94
ZNF554-203ENST00000590116 SBNO2Q9Y2G9 1366 aa27.17■■□□□ 1.94
ZNF554-203ENST00000590116 ZNF518AQ6AHZ1 1483 aa27.17■■□□□ 1.94
ZNF554-203ENST00000590116 LMTK2Q8IWU2 1503 aa27.16■■□□□ 1.94
ZNF554-203ENST00000590116 E9PSI1 815 aa27.16■■□□□ 1.94
ZNF554-203ENST00000590116 SLC12A5Q9H2X9 1139 aa27.16■■□□□ 1.94
ZNF554-203ENST00000590116 NPATQ14207 1427 aa27.15■■□□□ 1.94
ZNF554-203ENST00000590116 RGS3P49796 1198 aa27.15■■□□□ 1.94
ZNF554-203ENST00000590116 QRICH2Q9H0J4 1663 aa27.14■■□□□ 1.93
ZNF554-203ENST00000590116 NUTM2DQ5VT03 806 aaPredicted RBP27.13■■□□□ 1.93
ZNF554-203ENST00000590116 NEUROD2Q15784 382 aa27.13■■□□□ 1.93
ZNF554-203ENST00000590116 RRP7AQ9Y3A4 280 aaKnown RBP27.12■■□□□ 1.93
ZNF554-203ENST00000590116 SETBP1Q9Y6X0 1596 aa27.12■■□□□ 1.93
ZNF554-203ENST00000590116 PPLO60437 1756 aa27.11■■□□□ 1.93
ZNF554-203ENST00000590116 MORC1Q86VD1 984 aa27.11■■□□□ 1.93
ZNF554-203ENST00000590116 FRMPD1Q5SYB0 1578 aa27.11■■□□□ 1.93
ZNF554-203ENST00000590116 POLR3AO14802 1390 aaPredicted RBP27.11■■□□□ 1.93
ZNF554-203ENST00000590116 ZC3H13Q5T200 1668 aaKnown RBP27.11■■□□□ 1.93
ZNF554-203ENST00000590116 NEFMP07197 916 aa27.1■■□□□ 1.93
ZNF554-203ENST00000590116 SLC4A3P48751 1232 aa27.1■■□□□ 1.93
ZNF554-203ENST00000590116 SHPRHQ149N8 1683 aa27.1■■□□□ 1.93
ZNF554-203ENST00000590116 C8orf34Q49A92 452 aa27.09■■□□□ 1.93
ZNF554-203ENST00000590116 SENP3Q9H4L4 574 aaPredicted RBP27.09■■□□□ 1.93
ZNF554-203ENST00000590116 WWC1Q8IX03 1113 aa27.09■■□□□ 1.93
ZNF554-203ENST00000590116 NGEFQ8N5V2 710 aa27.08■■□□□ 1.93
ZNF554-203ENST00000590116 DDRGK1Q96HY6 314 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms