RNA–Protein interactions for RNA: ENST00000590104.1

LAMA3-211, Transcript of laminin subunit alpha 3, humanhuman

TSL 5

Gene LAMA3, Length 462 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-211ENST00000590104 SETD1BQ9UPS6 1966 aaKnown RBP10.86□□□□□ -0.67
LAMA3-211ENST00000590104 PPP1R37O75864 691 aa10.86□□□□□ -0.67
LAMA3-211ENST00000590104 PHLDB1Q86UU1 1377 aa10.86□□□□□ -0.67
LAMA3-211ENST00000590104 SRCAPQ6ZRS2 3230 aa10.85□□□□□ -0.67
LAMA3-211ENST00000590104 SLC34A2O95436 690 aa10.85□□□□□ -0.67
LAMA3-211ENST00000590104 PTGER2P43116 358 aa10.85□□□□□ -0.67
LAMA3-211ENST00000590104 PCDHGA4Q9Y5G9 962 aa10.85□□□□□ -0.67
LAMA3-211ENST00000590104 PRXQ9BXM0 1461 aa10.85□□□□□ -0.67
LAMA3-211ENST00000590104 EEA1Q15075 1411 aa10.84□□□□□ -0.67
LAMA3-211ENST00000590104 LSM11P83369 360 aaKnown RBP eCLIP10.83□□□□□ -0.68
LAMA3-211ENST00000590104 SETD1AO15047 1707 aaKnown RBP10.83□□□□□ -0.68
LAMA3-211ENST00000590104 LHX6Q9UPM6 363 aa10.82□□□□□ -0.68
LAMA3-211ENST00000590104 AKNAQ7Z591 1439 aa10.82□□□□□ -0.68
LAMA3-211ENST00000590104 ARID3CA6NKF2 412 aa10.81□□□□□ -0.68
LAMA3-211ENST00000590104 TOM1O60784 492 aa10.8□□□□□ -0.68
LAMA3-211ENST00000590104 PBX2P40425 430 aa10.8□□□□□ -0.68
LAMA3-211ENST00000590104 POTEAQ6S8J7 498 aa10.8□□□□□ -0.68
LAMA3-211ENST00000590104 NEO1Q92859 1461 aa10.8□□□□□ -0.68
LAMA3-211ENST00000590104 NCOA1Q15788 1441 aa10.79□□□□□ -0.68
LAMA3-211ENST00000590104 RICTORQ6R327 1708 aa10.78□□□□□ -0.68
LAMA3-211ENST00000590104 HS6ST3Q8IZP7 471 aa10.78□□□□□ -0.68
LAMA3-211ENST00000590104 NCKAP5LQ9HCH0 1330 aa10.78□□□□□ -0.68
LAMA3-211ENST00000590104 KIAA0556O60303 1618 aa10.77□□□□□ -0.68
LAMA3-211ENST00000590104 ABCA9Q8IUA7 1624 aa10.77□□□□□ -0.68
LAMA3-211ENST00000590104 ARHGEF12Q9NZN5 1544 aa10.77□□□□□ -0.69
LAMA3-211ENST00000590104 DENND4BO75064 1496 aaPredicted RBP10.76□□□□□ -0.69
LAMA3-211ENST00000590104 ZFYVE16Q7Z3T8 1539 aa10.76□□□□□ -0.69
LAMA3-211ENST00000590104 AXIN2Q9Y2T1 843 aa10.76□□□□□ -0.69
LAMA3-211ENST00000590104 CAMSAP1Q5T5Y3 1602 aa10.74□□□□□ -0.69
LAMA3-211ENST00000590104 CHGAP10645 457 aaKnown RBP10.74□□□□□ -0.69
LAMA3-211ENST00000590104 POTEEQ6S8J3 1075 aa10.74□□□□□ -0.69
LAMA3-211ENST00000590104 PSDA5PKW4 1024 aaPredicted RBP10.73□□□□□ -0.69
LAMA3-211ENST00000590104 FOXK1P85037 733 aa10.73□□□□□ -0.69
LAMA3-211ENST00000590104 PLPP6Q8IY26 295 aa10.73□□□□□ -0.69
LAMA3-211ENST00000590104 EFCAB5A4FU69 1503 aa10.73□□□□□ -0.69
LAMA3-211ENST00000590104 UPF1Q92900 1129 aaKnown RBP eCLIP10.72□□□□□ -0.69
LAMA3-211ENST00000590104 ABCA8O94911 1581 aa10.71□□□□□ -0.69
LAMA3-211ENST00000590104 C3P01024 1663 aa10.71□□□□□ -0.69
LAMA3-211ENST00000590104 FHOD3Q2V2M9 1422 aa10.71□□□□□ -0.69
LAMA3-211ENST00000590104 PTCD2Q8WV60 388 aaKnown RBP10.71□□□□□ -0.69
LAMA3-211ENST00000590104 GPHNQ9NQX3 736 aaPredicted RBP10.71□□□□□ -0.69
LAMA3-211ENST00000590104 P3H3Q8IVL6 736 aa10.7□□□□□ -0.7
LAMA3-211ENST00000590104 CTTNBP2Q8WZ74 1663 aa10.69□□□□□ -0.7
LAMA3-211ENST00000590104 PLEKHD1A6NEE1 506 aa10.69□□□□□ -0.7
LAMA3-211ENST00000590104 ARHGAP33O14559 1287 aa10.69□□□□□ -0.7
LAMA3-211ENST00000590104 ZMYM4Q5VZL5 1548 aa10.68□□□□□ -0.7
LAMA3-211ENST00000590104 DSG2Q14126 1118 aa10.68□□□□□ -0.7
LAMA3-211ENST00000590104 ATP10BO94823 1461 aa10.68□□□□□ -0.7
LAMA3-211ENST00000590104 HECW1Q76N89 1606 aa10.67□□□□□ -0.7
LAMA3-211ENST00000590104 TBC1D12O60347 775 aa10.67□□□□□ -0.7
LAMA3-211ENST00000590104 TRAPPC8Q9Y2L5 1435 aa10.67□□□□□ -0.7
LAMA3-211ENST00000590104 ADGRD1Q6QNK2 874 aa10.66□□□□□ -0.7
LAMA3-211ENST00000590104 ATP10AO60312 1499 aa10.65□□□□□ -0.7
LAMA3-211ENST00000590104 MAGI2Q86UL8 1455 aa10.65□□□□□ -0.7
LAMA3-211ENST00000590104 ALKQ9UM73 1620 aa10.65□□□□□ -0.7
LAMA3-211ENST00000590104 UBTFP17480 764 aaKnown RBP10.64□□□□□ -0.71
LAMA3-211ENST00000590104 RYDENQ9NUL5 291 aaKnown RBP10.64□□□□□ -0.71
LAMA3-211ENST00000590104 CDK11AQ9UQ88 783 aaPredicted RBP10.64□□□□□ -0.71
LAMA3-211ENST00000590104 PTPRKQ15262 1439 aa10.64□□□□□ -0.71
LAMA3-211ENST00000590104 SUPT6HQ7KZ85 1726 aaKnown RBP10.64□□□□□ -0.71
LAMA3-211ENST00000590104 NKX1-1Q15270 411 aaPredicted RBP10.63□□□□□ -0.71
LAMA3-211ENST00000590104 PPP4R3BQ5MIZ7 849 aa10.63□□□□□ -0.71
LAMA3-211ENST00000590104 ESF1Q9H501 851 aaKnown RBP10.63□□□□□ -0.71
LAMA3-211ENST00000590104 C9orf84Q5VXU9 1444 aa10.63□□□□□ -0.71
LAMA3-211ENST00000590104 SAMD9Q5K651 1589 aa10.62□□□□□ -0.71
LAMA3-211ENST00000590104 PSEN2P49810 448 aa10.62□□□□□ -0.71
LAMA3-211ENST00000590104 CPS1P31327 1500 aa10.6□□□□□ -0.71
LAMA3-211ENST00000590104 RANGAP1P46060 587 aaPredicted RBP10.6□□□□□ -0.71
LAMA3-211ENST00000590104 TK2O00142 265 aa10.59□□□□□ -0.71
LAMA3-211ENST00000590104 DMRTA1Q5VZB9 504 aa10.59□□□□□ -0.71
LAMA3-211ENST00000590104 TRIM52Q96A61 297 aa10.59□□□□□ -0.71
LAMA3-211ENST00000590104 HCSTQ9UBK5 93 aa10.59□□□□□ -0.71
LAMA3-211ENST00000590104 CFAP74Q9C0B2 1584 aa10.59□□□□□ -0.71
LAMA3-211ENST00000590104 FMN1Q68DA7 1419 aa10.58□□□□□ -0.72
LAMA3-211ENST00000590104 RAPGEF6Q8TEU7 1601 aa10.58□□□□□ -0.72
LAMA3-211ENST00000590104 NUP153P49790 1475 aaKnown RBP10.57□□□□□ -0.72
LAMA3-211ENST00000590104 SHANK2Q9UPX8 1470 aa10.57□□□□□ -0.72
LAMA3-211ENST00000590104 OXER1Q8TDS5 423 aa10.57□□□□□ -0.72
LAMA3-211ENST00000590104 TCOF1Q13428 1488 aaKnown RBP10.56□□□□□ -0.72
LAMA3-211ENST00000590104 IFFO2Q5TF58 517 aa10.56□□□□□ -0.72
LAMA3-211ENST00000590104 CRISPLD2Q9H0B8 497 aa10.56□□□□□ -0.72
LAMA3-211ENST00000590104 PLA2R1Q13018 1463 aa10.55□□□□□ -0.72
LAMA3-211ENST00000590104 PPP1R15BQ5SWA1 713 aa10.55□□□□□ -0.72
LAMA3-211ENST00000590104 STAC3Q96MF2 364 aa10.55□□□□□ -0.72
LAMA3-211ENST00000590104 SCAPERQ9BY12 1400 aa10.55□□□□□ -0.72
LAMA3-211ENST00000590104 HRO43593 1189 aa10.54□□□□□ -0.72
LAMA3-211ENST00000590104 EFCAB2Q5VUJ9 269 aa10.54□□□□□ -0.72
LAMA3-211ENST00000590104 KCNK17Q96T54 332 aa10.54□□□□□ -0.72
LAMA3-211ENST00000590104 PLA2G2EQ9NZK7 142 aa10.53□□□□□ -0.72
LAMA3-211ENST00000590104 ZNF454Q8N9F8 522 aa10.52□□□□□ -0.73
LAMA3-211ENST00000590104 ATP1B4Q9UN42 357 aaPredicted RBP10.52□□□□□ -0.73
LAMA3-211ENST00000590104 PDE4AP27815 886 aa10.51□□□□□ -0.73
LAMA3-211ENST00000590104 KCTD12Q96CX2 325 aaKnown RBP10.5□□□□□ -0.73
LAMA3-211ENST00000590104 RBM33Q96EV2 1170 aaKnown RBP10.5□□□□□ -0.73
LAMA3-211ENST00000590104 CEP170BQ9Y4F5 1589 aaPredicted RBP10.5□□□□□ -0.73
LAMA3-211ENST00000590104 MYO3AQ8NEV4 1616 aa10.5□□□□□ -0.73
LAMA3-211ENST00000590104 ZNF142P52746 1687 aaPredicted RBP10.5□□□□□ -0.73
LAMA3-211ENST00000590104 PLCH2O75038 1416 aa10.5□□□□□ -0.73
LAMA3-211ENST00000590104 NPATQ14207 1427 aa10.5□□□□□ -0.73
LAMA3-211ENST00000590104 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms