RNA–Protein interactions for RNA: ENST00000589353.5

RANBP3-216, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 490 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-216ENST00000589353 TNRQ92752 1358 aa13.97□□□□□ -0.17
RANBP3-216ENST00000589353 PPLO60437 1756 aa13.97□□□□□ -0.17
RANBP3-216ENST00000589353 SLC24A1O60721 1099 aa13.96□□□□□ -0.17
RANBP3-216ENST00000589353 ZFYVE9O95405 1425 aa13.96□□□□□ -0.18
RANBP3-216ENST00000589353 FER1L4A9Z1Z3 1794 aa13.96□□□□□ -0.18
RANBP3-216ENST00000589353 NRXN1Q9ULB1 1477 aa13.95□□□□□ -0.18
RANBP3-216ENST00000589353 TMEM131LA2VDJ0 1609 aa13.95□□□□□ -0.18
RANBP3-216ENST00000589353 NBPF1Q3BBV0 1214 aa13.95□□□□□ -0.18
RANBP3-216ENST00000589353 EIF3AQ14152 1382 aaKnown RBP13.95□□□□□ -0.18
RANBP3-216ENST00000589353 ADGRF5Q8IZF2 1346 aa13.94□□□□□ -0.18
RANBP3-216ENST00000589353 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.94□□□□□ -0.18
RANBP3-216ENST00000589353 DDX10Q13206 875 aaKnown RBP13.93□□□□□ -0.18
RANBP3-216ENST00000589353 NLRP1Q9C000 1473 aa13.93□□□□□ -0.18
RANBP3-216ENST00000589353 NEXMIFQ5QGS0 1516 aa13.92□□□□□ -0.18
RANBP3-216ENST00000589353 C14orf93Q9H972 538 aaKnown RBP13.92□□□□□ -0.18
RANBP3-216ENST00000589353 KDM5AP29375 1690 aaKnown RBP13.91□□□□□ -0.18
RANBP3-216ENST00000589353 PIK3C2GO75747 1445 aa13.91□□□□□ -0.18
RANBP3-216ENST00000589353 POLR1AO95602 1720 aaPredicted RBP13.91□□□□□ -0.18
RANBP3-216ENST00000589353 ST20-MTHFSA0A0A6YYL1 179 aa13.91□□□□□ -0.18
RANBP3-216ENST00000589353 CCDC7Q96M83 1385 aa13.91□□□□□ -0.18
RANBP3-216ENST00000589353 SCAF11Q99590 1463 aaKnown RBP13.91□□□□□ -0.18
RANBP3-216ENST00000589353 CFAP70Q5T0N1 1121 aa13.9□□□□□ -0.18
RANBP3-216ENST00000589353 A2ML1A8K2U0 1454 aa13.9□□□□□ -0.18
RANBP3-216ENST00000589353 SETBP1Q9Y6X0 1596 aa13.9□□□□□ -0.18
RANBP3-216ENST00000589353 MYO5BQ9ULV0 1848 aa13.9□□□□□ -0.18
RANBP3-216ENST00000589353 C3P01024 1663 aa13.89□□□□□ -0.19
RANBP3-216ENST00000589353 WASHC2AQ641Q2 1341 aa13.89□□□□□ -0.19
RANBP3-216ENST00000589353 TMF1P82094 1093 aa13.88□□□□□ -0.19
RANBP3-216ENST00000589353 CDCA8Q53HL2 280 aa13.88□□□□□ -0.19
RANBP3-216ENST00000589353 RIMS2Q9UQ26 1411 aa13.88□□□□□ -0.19
RANBP3-216ENST00000589353 IQGAP1P46940 1657 aa13.87□□□□□ -0.19
RANBP3-216ENST00000589353 KIF7Q2M1P5 1343 aa13.87□□□□□ -0.19
RANBP3-216ENST00000589353 CEBPAP49715 358 aaPredicted RBP13.86□□□□□ -0.19
RANBP3-216ENST00000589353 ADAMTSL3P82987 1691 aa13.85□□□□□ -0.19
RANBP3-216ENST00000589353 ANP32CO43423 234 aa13.85□□□□□ -0.19
RANBP3-216ENST00000589353 RIMS1Q86UR5 1692 aaKnown RBP13.85□□□□□ -0.19
RANBP3-216ENST00000589353 NUTM2DQ5VT03 806 aaPredicted RBP13.84□□□□□ -0.19
RANBP3-216ENST00000589353 THEMISQ8N1K5 641 aaPredicted RBP13.84□□□□□ -0.19
RANBP3-216ENST00000589353 EID1Q9Y6B2 187 aa13.84□□□□□ -0.19
RANBP3-216ENST00000589353 C11orf95C9JLR9 678 aaPredicted RBP13.83□□□□□ -0.2
RANBP3-216ENST00000589353 MIER1Q8N108 512 aa13.83□□□□□ -0.2
RANBP3-216ENST00000589353 POLR3GLQ9BT43 218 aa13.83□□□□□ -0.2
RANBP3-216ENST00000589353 TMEM2Q9UHN6 1383 aa13.83□□□□□ -0.2
RANBP3-216ENST00000589353 UBR1Q8IWV7 1749 aa13.82□□□□□ -0.2
RANBP3-216ENST00000589353 PLPPR3Q6T4P5 718 aa13.82□□□□□ -0.2
RANBP3-216ENST00000589353 SETD1BQ9UPS6 1966 aaKnown RBP13.82□□□□□ -0.2
RANBP3-216ENST00000589353 TESK2Q96S53 571 aa13.81□□□□□ -0.2
RANBP3-216ENST00000589353 ADGRB1O14514 1584 aa13.8□□□□□ -0.2
RANBP3-216ENST00000589353 CENPJQ9HC77 1338 aaPredicted RBP13.8□□□□□ -0.2
RANBP3-216ENST00000589353 SBNO2Q9Y2G9 1366 aa13.8□□□□□ -0.2
RANBP3-216ENST00000589353 BCANQ96GW7 911 aa13.79□□□□□ -0.2
RANBP3-216ENST00000589353 TRAK1Q9UPV9 953 aa13.79□□□□□ -0.2
RANBP3-216ENST00000589353 ALKQ9UM73 1620 aa13.79□□□□□ -0.2
RANBP3-216ENST00000589353 TMEM132EQ6IEE7 984 aa13.78□□□□□ -0.2
RANBP3-216ENST00000589353 MYO3AQ8NEV4 1616 aa13.78□□□□□ -0.2
RANBP3-216ENST00000589353 SLIT1O75093 1534 aa13.77□□□□□ -0.21
RANBP3-216ENST00000589353 TXNDC2Q86VQ3 553 aa13.77□□□□□ -0.21
RANBP3-216ENST00000589353 PLEKHG1Q9ULL1 1385 aa13.76□□□□□ -0.21
RANBP3-216ENST00000589353 ARHGAP23Q9P227 1491 aa13.75□□□□□ -0.21
RANBP3-216ENST00000589353 YTHDC2Q9H6S0 1430 aaKnown RBP13.75□□□□□ -0.21
RANBP3-216ENST00000589353 PUS7Q96PZ0 661 aaKnown RBP13.75□□□□□ -0.21
RANBP3-216ENST00000589353 CEP170BQ9Y4F5 1589 aaPredicted RBP13.75□□□□□ -0.21
RANBP3-216ENST00000589353 DISP3Q9P2K9 1392 aa13.74□□□□□ -0.21
RANBP3-216ENST00000589353 CCER2I3L3R5 266 aa13.74□□□□□ -0.21
RANBP3-216ENST00000589353 POGKQ9P215 609 aa13.74□□□□□ -0.21
RANBP3-216ENST00000589353 PTPRMP28827 1452 aa13.74□□□□□ -0.21
RANBP3-216ENST00000589353 LRPPRCP42704 1394 aaKnown RBP13.73□□□□□ -0.21
RANBP3-216ENST00000589353 EVC2Q86UK5 1308 aa13.73□□□□□ -0.21
RANBP3-216ENST00000589353 STK26Q9P289 416 aa13.73□□□□□ -0.21
RANBP3-216ENST00000589353 ZNF142P52746 1687 aaPredicted RBP13.72□□□□□ -0.21
RANBP3-216ENST00000589353 ABCC11Q96J66 1382 aa13.72□□□□□ -0.21
RANBP3-216ENST00000589353 ANKLE2Q86XL3 938 aa13.72□□□□□ -0.21
RANBP3-216ENST00000589353 SIRT1Q96EB6 747 aa13.72□□□□□ -0.21
RANBP3-216ENST00000589353 DLC1Q96QB1 1528 aa13.72□□□□□ -0.21
RANBP3-216ENST00000589353 ARHGEF28Q8N1W1 1705 aaKnown RBP13.72□□□□□ -0.21
RANBP3-216ENST00000589353 QRICH2Q9H0J4 1663 aa13.72□□□□□ -0.21
RANBP3-216ENST00000589353 LTKP29376 864 aa13.71□□□□□ -0.21
RANBP3-216ENST00000589353 KTN1Q86UP2 1357 aaKnown RBP13.71□□□□□ -0.22
RANBP3-216ENST00000589353 ASXL1Q8IXJ9 1541 aa13.7□□□□□ -0.22
RANBP3-216ENST00000589353 TBX22Q9Y458 520 aa13.7□□□□□ -0.22
RANBP3-216ENST00000589353 DIP2AQ14689 1571 aa13.7□□□□□ -0.22
RANBP3-216ENST00000589353 NRXN3Q9Y4C0 1643 aa13.69□□□□□ -0.22
RANBP3-216ENST00000589353 SENP3Q9H4L4 574 aaPredicted RBP13.69□□□□□ -0.22
RANBP3-216ENST00000589353 SETD1AO15047 1707 aaKnown RBP13.69□□□□□ -0.22
RANBP3-216ENST00000589353 PRAM1Q96QH2 718 aa13.68□□□□□ -0.22
RANBP3-216ENST00000589353 FAM135BQ49AJ0 1406 aa13.67□□□□□ -0.22
RANBP3-216ENST00000589353 ADAMTS13Q76LX8 1427 aa13.67□□□□□ -0.22
RANBP3-216ENST00000589353 PRKRIP1Q9H875 184 aaPredicted RBP13.67□□□□□ -0.22
RANBP3-216ENST00000589353 METP08581 1390 aa13.67□□□□□ -0.22
RANBP3-216ENST00000589353 TECPR2O15040 1411 aa13.66□□□□□ -0.22
RANBP3-216ENST00000589353 RALBP1Q15311 655 aa13.66□□□□□ -0.22
RANBP3-216ENST00000589353 PANK3Q9H999 370 aa13.66□□□□□ -0.22
RANBP3-216ENST00000589353 KNDC1Q76NI1 1749 aa13.66□□□□□ -0.22
RANBP3-216ENST00000589353 PIK3R4Q99570 1358 aa13.66□□□□□ -0.22
RANBP3-216ENST00000589353 MED14O60244 1454 aa13.66□□□□□ -0.22
RANBP3-216ENST00000589353 KNSTRNQ9Y448 316 aa13.65□□□□□ -0.22
RANBP3-216ENST00000589353 NINLQ9Y2I6 1382 aa13.65□□□□□ -0.22
RANBP3-216ENST00000589353 ATAD2Q6PL18 1390 aa13.64□□□□□ -0.23
RANBP3-216ENST00000589353 SAFB2Q14151 953 aaKnown RBP eCLIP13.64□□□□□ -0.23
RANBP3-216ENST00000589353 SRPK2P78362 688 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms