RNA–Protein interactions for RNA: ENST00000589266.5

CIRBP-223, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-223ENST00000589266 FAM135BQ49AJ0 1406 aa36.93■■■■□ 3.5
CIRBP-223ENST00000589266 MPHOSPH9Q99550 1183 aa36.9■■■■□ 3.5
CIRBP-223ENST00000589266 SLC4A1APQ9BWU0 796 aaKnown RBP36.88■■■■□ 3.49
CIRBP-223ENST00000589266 STAG3Q9UJ98 1225 aa36.88■■■■□ 3.49
CIRBP-223ENST00000589266 TET3O43151 1660 aa36.88■■■■□ 3.49
CIRBP-223ENST00000589266 DHX57Q6P158 1386 aaKnown RBP36.87■■■■□ 3.49
CIRBP-223ENST00000589266 TMEM2Q9UHN6 1383 aa36.87■■■■□ 3.49
CIRBP-223ENST00000589266 TMEM94Q12767 1356 aa36.83■■■■□ 3.49
CIRBP-223ENST00000589266 PIK3C2BO00750 1634 aa36.83■■■■□ 3.49
CIRBP-223ENST00000589266 KCNA6P17658 529 aa36.8■■■■□ 3.48
CIRBP-223ENST00000589266 POTEAQ6S8J7 498 aa36.8■■■■□ 3.48
CIRBP-223ENST00000589266 EFCAB6Q5THR3 1501 aa36.8■■■■□ 3.48
CIRBP-223ENST00000589266 RPRD2Q5VT52 1461 aaKnown RBP36.77■■■■□ 3.48
CIRBP-223ENST00000589266 PROSER2Q86WR7 435 aaPredicted RBP36.77■■■■□ 3.48
CIRBP-223ENST00000589266 IDI1Q13907 227 aa36.74■■■■□ 3.47
CIRBP-223ENST00000589266 SLC26A8Q96RN1 970 aa36.73■■■■□ 3.47
CIRBP-223ENST00000589266 KDM5AP29375 1690 aaKnown RBP36.73■■■■□ 3.47
CIRBP-223ENST00000589266 E9PCH4 1651 aa36.72■■■■□ 3.47
CIRBP-223ENST00000589266 ROBO1Q9Y6N7 1651 aa36.72■■■■□ 3.47
CIRBP-223ENST00000589266 CLSPNQ9HAW4 1339 aa36.71■■■■□ 3.47
CIRBP-223ENST00000589266 RBM33Q96EV2 1170 aaKnown RBP36.69■■■■□ 3.46
CIRBP-223ENST00000589266 CCER1Q8TC90 406 aaPredicted RBP36.65■■■■□ 3.46
CIRBP-223ENST00000589266 NKTRP30414 1462 aaKnown RBP36.62■■■■□ 3.45
CIRBP-223ENST00000589266 BCANQ96GW7 911 aa36.61■■■■□ 3.45
CIRBP-223ENST00000589266 MSH6P52701 1360 aa36.61■■■■□ 3.45
CIRBP-223ENST00000589266 ANKRD30BQ9BXX2 1392 aa36.61■■■■□ 3.45
CIRBP-223ENST00000589266 SLAIN2Q9P270 581 aa36.59■■■■□ 3.45
CIRBP-223ENST00000589266 FOXD1Q16676 465 aa36.57■■■■□ 3.44
CIRBP-223ENST00000589266 SLC52A1Q9NWF4 448 aa36.57■■■■□ 3.44
CIRBP-223ENST00000589266 NOS1P29475 1434 aa36.57■■■■□ 3.44
CIRBP-223ENST00000589266 NWD1Q149M9 1564 aa36.57■■■■□ 3.44
CIRBP-223ENST00000589266 SPHKAPQ2M3C7 1700 aa36.56■■■■□ 3.44
CIRBP-223ENST00000589266 ADGRB3O60242 1522 aa36.54■■■■□ 3.44
CIRBP-223ENST00000589266 JCADQ9P266 1359 aa36.54■■■■□ 3.44
CIRBP-223ENST00000589266 TRPM2O94759 1503 aa36.54■■■■□ 3.44
CIRBP-223ENST00000589266 PHLPP1O60346 1717 aa36.52■■■■□ 3.44
CIRBP-223ENST00000589266 SETD1AO15047 1707 aaKnown RBP36.45■■■■□ 3.43
CIRBP-223ENST00000589266 HDGFP51858 240 aaKnown RBP36.45■■■■□ 3.43
CIRBP-223ENST00000589266 CCDC144AA2RUR9 1427 aa36.44■■■■□ 3.42
CIRBP-223ENST00000589266 CHD2O14647 1828 aaKnown RBP36.43■■■■□ 3.42
CIRBP-223ENST00000589266 PLEKHG1Q9ULL1 1385 aa36.42■■■■□ 3.42
CIRBP-223ENST00000589266 PPP1R15AO75807 674 aaPredicted RBP36.42■■■■□ 3.42
CIRBP-223ENST00000589266 ZFYVE9O95405 1425 aa36.4■■■■□ 3.42
CIRBP-223ENST00000589266 COL16A1Q07092 1604 aaPredicted RBP36.37■■■■□ 3.41
CIRBP-223ENST00000589266 SPATA31A6Q5VVP1 1343 aa36.36■■■■□ 3.41
CIRBP-223ENST00000589266 RIMS2Q9UQ26 1411 aa36.36■■■■□ 3.41
CIRBP-223ENST00000589266 NCOA3Q9Y6Q9 1424 aa36.36■■■■□ 3.41
CIRBP-223ENST00000589266 TBX22Q9Y458 520 aa36.36■■■■□ 3.41
CIRBP-223ENST00000589266 CLTCL1P53675 1640 aa36.36■■■■□ 3.41
CIRBP-223ENST00000589266 C14orf37Q86TY3 774 aa36.35■■■■□ 3.41
CIRBP-223ENST00000589266 MYO5BQ9ULV0 1848 aa36.34■■■■□ 3.41
CIRBP-223ENST00000589266 MEX3CQ5U5Q3 659 aaKnown RBP36.34■■■■□ 3.41
CIRBP-223ENST00000589266 ZNF772Q68DY9 489 aaPredicted RBP36.33■■■■□ 3.41
CIRBP-223ENST00000589266 SIN3AQ96ST3 1273 aa36.32■■■■□ 3.4
CIRBP-223ENST00000589266 CADPS2Q86UW7 1296 aa36.3■■■■□ 3.4
CIRBP-223ENST00000589266 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.29■■■■□ 3.4
CIRBP-223ENST00000589266 LRP6O75581 1613 aa36.29■■■■□ 3.4
CIRBP-223ENST00000589266 TMEM131LA2VDJ0 1609 aa36.27■■■■□ 3.4
CIRBP-223ENST00000589266 UPF1Q92900 1129 aaKnown RBP eCLIP36.27■■■■□ 3.4
CIRBP-223ENST00000589266 C19orf44Q9H6X5 657 aa36.27■■■■□ 3.4
CIRBP-223ENST00000589266 TIMELESSQ9UNS1 1208 aa36.27■■■■□ 3.4
CIRBP-223ENST00000589266 KIF1BO60333 1816 aa36.27■■■■□ 3.4
CIRBP-223ENST00000589266 ATF3P18847 181 aa36.26■■■■□ 3.4
CIRBP-223ENST00000589266 CHGAP10645 457 aaKnown RBP36.24■■■■□ 3.39
CIRBP-223ENST00000589266 NEUROD1Q13562 356 aa36.24■■■■□ 3.39
CIRBP-223ENST00000589266 SPATA31E1Q6ZUB1 1445 aa36.23■■■■□ 3.39
CIRBP-223ENST00000589266 AHDC1Q5TGY3 1603 aaPredicted RBP36.22■■■■□ 3.39
CIRBP-223ENST00000589266 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.21■■■■□ 3.39
CIRBP-223ENST00000589266 PIK3R4Q99570 1358 aa36.2■■■■□ 3.39
CIRBP-223ENST00000589266 ADAMTS13Q76LX8 1427 aa36.19■■■■□ 3.38
CIRBP-223ENST00000589266 SHPRHQ149N8 1683 aa36.19■■■■□ 3.38
CIRBP-223ENST00000589266 NUTM2DQ5VT03 806 aaPredicted RBP36.18■■■■□ 3.38
CIRBP-223ENST00000589266 RXRBP28702 533 aa36.17■■■■□ 3.38
CIRBP-223ENST00000589266 DIP2AQ14689 1571 aa36.16■■■■□ 3.38
CIRBP-223ENST00000589266 TONSLQ96HA7 1378 aa36.15■■■■□ 3.38
CIRBP-223ENST00000589266 ZEB1P37275 1124 aaPredicted RBP36.12■■■■□ 3.37
CIRBP-223ENST00000589266 BRINP3Q76B58 766 aa36.11■■■■□ 3.37
CIRBP-223ENST00000589266 NUTM2BA6NNL0 878 aaPredicted RBP36.1■■■■□ 3.37
CIRBP-223ENST00000589266 NUTM2EB1AL46 878 aaPredicted RBP36.1■■■■□ 3.37
CIRBP-223ENST00000589266 NUTM2AQ8IVF1 878 aaPredicted RBP36.1■■■■□ 3.37
CIRBP-223ENST00000589266 AMOTL2Q9Y2J4 779 aa36.1■■■■□ 3.37
CIRBP-223ENST00000589266 RPGRIP1LQ68CZ1 1315 aa36.09■■■■□ 3.37
CIRBP-223ENST00000589266 STAC3Q96MF2 364 aa36.09■■■■□ 3.37
CIRBP-223ENST00000589266 CDK12Q9NYV4 1490 aaPredicted RBP36.05■■■■□ 3.36
CIRBP-223ENST00000589266 RGL3Q3MIN7 710 aa36.04■■■■□ 3.36
CIRBP-223ENST00000589266 L3MBTL2Q969R5 705 aa36.04■■■■□ 3.36
CIRBP-223ENST00000589266 DCCP43146 1447 aa36.01■■■■□ 3.36
CIRBP-223ENST00000589266 PTPRUQ92729 1446 aa36.01■■■■□ 3.36
CIRBP-223ENST00000589266 AFF2P51816 1311 aa36.01■■■■□ 3.35
CIRBP-223ENST00000589266 ZNF326Q5BKZ1 582 aaKnown RBP36■■■■□ 3.35
CIRBP-223ENST00000589266 IFT172Q9UG01 1749 aa35.98■■■■□ 3.35
CIRBP-223ENST00000589266 LRRC59Q96AG4 307 aaKnown RBP35.96■■■■□ 3.35
CIRBP-223ENST00000589266 NEXMIFQ5QGS0 1516 aa35.96■■■■□ 3.35
CIRBP-223ENST00000589266 ASXL1Q8IXJ9 1541 aa35.96■■■■□ 3.35
CIRBP-223ENST00000589266 PPLO60437 1756 aa35.96■■■■□ 3.35
CIRBP-223ENST00000589266 MYOM2P54296 1465 aa35.95■■■■□ 3.35
CIRBP-223ENST00000589266 DCAF11Q8TEB1 546 aa35.94■■■■□ 3.34
CIRBP-223ENST00000589266 MST1RQ04912 1400 aa35.91■■■■□ 3.34
CIRBP-223ENST00000589266 VGFO15240 615 aaPredicted RBP35.9■■■■□ 3.34
CIRBP-223ENST00000589266 QTRT2Q9H974 415 aaKnown RBP35.89■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms