RNA–Protein interactions for RNA: ENST00000588961.1

KDM4B-207, Transcript of lysine demethylase 4B, humanhuman

TSL 4

Gene KDM4B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-207ENST00000588961 STAG3Q9UJ98 1225 aa12.57□□□□□ -0.4
KDM4B-207ENST00000588961 PIK3C2BO00750 1634 aa12.56□□□□□ -0.4
KDM4B-207ENST00000588961 CHGAP10645 457 aaKnown RBP12.56□□□□□ -0.4
KDM4B-207ENST00000588961 SLC52A1Q9NWF4 448 aa12.56□□□□□ -0.4
KDM4B-207ENST00000588961 DIEXFQ68CQ4 756 aaKnown RBP12.55□□□□□ -0.4
KDM4B-207ENST00000588961 STRCQ7RTU9 1775 aa12.54□□□□□ -0.4
KDM4B-207ENST00000588961 UBR1Q8IWV7 1749 aa12.54□□□□□ -0.4
KDM4B-207ENST00000588961 PTPRTO14522 1441 aa12.54□□□□□ -0.4
KDM4B-207ENST00000588961 SPHKAPQ2M3C7 1700 aa12.53□□□□□ -0.4
KDM4B-207ENST00000588961 ANKLE2Q86XL3 938 aa12.52□□□□□ -0.41
KDM4B-207ENST00000588961 PLA2R1Q13018 1463 aa12.52□□□□□ -0.41
KDM4B-207ENST00000588961 LTKP29376 864 aa12.5□□□□□ -0.41
KDM4B-207ENST00000588961 TXNDC2Q86VQ3 553 aa12.5□□□□□ -0.41
KDM4B-207ENST00000588961 ADGRB3O60242 1522 aa12.5□□□□□ -0.41
KDM4B-207ENST00000588961 CLTCL1P53675 1640 aa12.49□□□□□ -0.41
KDM4B-207ENST00000588961 TRPM2O94759 1503 aa12.49□□□□□ -0.41
KDM4B-207ENST00000588961 MYO5BQ9ULV0 1848 aa12.48□□□□□ -0.41
KDM4B-207ENST00000588961 TMEM131LA2VDJ0 1609 aa12.48□□□□□ -0.41
KDM4B-207ENST00000588961 TMEM2Q9UHN6 1383 aa12.48□□□□□ -0.41
KDM4B-207ENST00000588961 NUTM2DQ5VT03 806 aaPredicted RBP12.48□□□□□ -0.41
KDM4B-207ENST00000588961 EID1Q9Y6B2 187 aa12.48□□□□□ -0.41
KDM4B-207ENST00000588961 ARHGAP23Q9P227 1491 aa12.47□□□□□ -0.41
KDM4B-207ENST00000588961 ZNF326Q5BKZ1 582 aaKnown RBP12.47□□□□□ -0.41
KDM4B-207ENST00000588961 SAMD1Q6SPF0 538 aaPredicted RBP12.47□□□□□ -0.41
KDM4B-207ENST00000588961 KDM5AP29375 1690 aaKnown RBP12.47□□□□□ -0.41
KDM4B-207ENST00000588961 SLIT1O75093 1534 aa12.47□□□□□ -0.41
KDM4B-207ENST00000588961 POLR1AO95602 1720 aaPredicted RBP12.46□□□□□ -0.41
KDM4B-207ENST00000588961 NEURL4Q96JN8 1562 aa12.46□□□□□ -0.42
KDM4B-207ENST00000588961 NPHP4O75161 1426 aaPredicted RBP12.45□□□□□ -0.42
KDM4B-207ENST00000588961 RIMS2Q9UQ26 1411 aa12.45□□□□□ -0.42
KDM4B-207ENST00000588961 SCAF11Q99590 1463 aaKnown RBP12.45□□□□□ -0.42
KDM4B-207ENST00000588961 CCDC144AA2RUR9 1427 aa12.45□□□□□ -0.42
KDM4B-207ENST00000588961 PPP1R15AO75807 674 aaPredicted RBP12.44□□□□□ -0.42
KDM4B-207ENST00000588961 RGL3Q3MIN7 710 aa12.44□□□□□ -0.42
KDM4B-207ENST00000588961 BCANQ96GW7 911 aa12.44□□□□□ -0.42
KDM4B-207ENST00000588961 MED14O60244 1454 aa12.43□□□□□ -0.42
KDM4B-207ENST00000588961 HDGFP51858 240 aaKnown RBP12.43□□□□□ -0.42
KDM4B-207ENST00000588961 KIF1BO60333 1816 aa12.43□□□□□ -0.42
KDM4B-207ENST00000588961 ZFYVE9O95405 1425 aa12.43□□□□□ -0.42
KDM4B-207ENST00000588961 ANKRD30BQ9BXX2 1392 aa12.43□□□□□ -0.42
KDM4B-207ENST00000588961 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.42□□□□□ -0.42
KDM4B-207ENST00000588961 SPINK5Q9NQ38 1064 aaPredicted RBP12.42□□□□□ -0.42
KDM4B-207ENST00000588961 SLC26A8Q96RN1 970 aa12.41□□□□□ -0.42
KDM4B-207ENST00000588961 IQGAP1P46940 1657 aa12.41□□□□□ -0.42
KDM4B-207ENST00000588961 ZNF335Q9H4Z2 1342 aaPredicted RBP12.4□□□□□ -0.42
KDM4B-207ENST00000588961 NEXMIFQ5QGS0 1516 aa12.38□□□□□ -0.43
KDM4B-207ENST00000588961 CAPN15O75808 1086 aa12.38□□□□□ -0.43
KDM4B-207ENST00000588961 PLEKHG1Q9ULL1 1385 aa12.38□□□□□ -0.43
KDM4B-207ENST00000588961 SPATA31E1Q6ZUB1 1445 aa12.37□□□□□ -0.43
KDM4B-207ENST00000588961 RPGRIP1LQ68CZ1 1315 aa12.37□□□□□ -0.43
KDM4B-207ENST00000588961 VGFO15240 615 aaPredicted RBP12.36□□□□□ -0.43
KDM4B-207ENST00000588961 SIN3AQ96ST3 1273 aa12.36□□□□□ -0.43
KDM4B-207ENST00000588961 CENPBP07199 599 aaPredicted RBP12.35□□□□□ -0.43
KDM4B-207ENST00000588961 LTBP4Q8N2S1 1624 aa12.34□□□□□ -0.43
KDM4B-207ENST00000588961 NEUROD1Q13562 356 aa12.34□□□□□ -0.43
KDM4B-207ENST00000588961 CERKQ8TCT0 537 aa12.34□□□□□ -0.43
KDM4B-207ENST00000588961 ADGRF5Q8IZF2 1346 aa12.34□□□□□ -0.43
KDM4B-207ENST00000588961 PPLO60437 1756 aa12.33□□□□□ -0.44
KDM4B-207ENST00000588961 KDM2AQ9Y2K7 1162 aa12.33□□□□□ -0.44
KDM4B-207ENST00000588961 TBX22Q9Y458 520 aa12.33□□□□□ -0.44
KDM4B-207ENST00000588961 ADAMTS13Q76LX8 1427 aa12.33□□□□□ -0.44
KDM4B-207ENST00000588961 DCAF11Q8TEB1 546 aa12.32□□□□□ -0.44
KDM4B-207ENST00000588961 TONSLQ96HA7 1378 aa12.31□□□□□ -0.44
KDM4B-207ENST00000588961 STRCP1A6NGW2 1772 aa12.31□□□□□ -0.44
KDM4B-207ENST00000588961 NRXN3Q9Y4C0 1643 aa12.31□□□□□ -0.44
KDM4B-207ENST00000588961 KCNA6P17658 529 aa12.31□□□□□ -0.44
KDM4B-207ENST00000588961 RBM33Q96EV2 1170 aaKnown RBP12.3□□□□□ -0.44
KDM4B-207ENST00000588961 IFT172Q9UG01 1749 aa12.3□□□□□ -0.44
KDM4B-207ENST00000588961 SETBP1Q9Y6X0 1596 aa12.3□□□□□ -0.44
KDM4B-207ENST00000588961 METP08581 1390 aa12.3□□□□□ -0.44
KDM4B-207ENST00000588961 ZNF219Q9P2Y4 722 aaPredicted RBP12.29□□□□□ -0.44
KDM4B-207ENST00000588961 PROSER2Q86WR7 435 aaPredicted RBP12.28□□□□□ -0.44
KDM4B-207ENST00000588961 AMOTL2Q9Y2J4 779 aa12.28□□□□□ -0.44
KDM4B-207ENST00000588961 PTPRUQ92729 1446 aa12.28□□□□□ -0.44
KDM4B-207ENST00000588961 CPS1P31327 1500 aa12.27□□□□□ -0.44
KDM4B-207ENST00000588961 DIP2AQ14689 1571 aa12.27□□□□□ -0.44
KDM4B-207ENST00000588961 ALKQ9UM73 1620 aa12.27□□□□□ -0.44
KDM4B-207ENST00000588961 LRRC7Q96NW7 1537 aa12.27□□□□□ -0.45
KDM4B-207ENST00000588961 CHD2O14647 1828 aaKnown RBP12.26□□□□□ -0.45
KDM4B-207ENST00000588961 CFAP70Q5T0N1 1121 aa12.26□□□□□ -0.45
KDM4B-207ENST00000588961 TMEM132EQ6IEE7 984 aa12.26□□□□□ -0.45
KDM4B-207ENST00000588961 L3MBTL2Q969R5 705 aa12.26□□□□□ -0.45
KDM4B-207ENST00000588961 PIK3R4Q99570 1358 aa12.25□□□□□ -0.45
KDM4B-207ENST00000588961 PIK3C2GO75747 1445 aa12.25□□□□□ -0.45
KDM4B-207ENST00000588961 MYOM2P54296 1465 aa12.25□□□□□ -0.45
KDM4B-207ENST00000588961 SETD1AO15047 1707 aaKnown RBP12.24□□□□□ -0.45
KDM4B-207ENST00000588961 NWD1Q149M9 1564 aa12.24□□□□□ -0.45
KDM4B-207ENST00000588961 C14orf93Q9H972 538 aaKnown RBP12.24□□□□□ -0.45
KDM4B-207ENST00000588961 NRXN1Q9ULB1 1477 aa12.24□□□□□ -0.45
KDM4B-207ENST00000588961 TMEM94Q12767 1356 aa12.23□□□□□ -0.45
KDM4B-207ENST00000588961 ATXN8OSP0DMR3 200 aa12.23□□□□□ -0.45
KDM4B-207ENST00000588961 MIER1Q8N108 512 aa12.23□□□□□ -0.45
KDM4B-207ENST00000588961 STK26Q9P289 416 aa12.23□□□□□ -0.45
KDM4B-207ENST00000588961 ATF5Q9Y2D1 282 aaPredicted RBP12.23□□□□□ -0.45
KDM4B-207ENST00000588961 STAC3Q96MF2 364 aa12.22□□□□□ -0.45
KDM4B-207ENST00000588961 NKTRP30414 1462 aaKnown RBP12.21□□□□□ -0.45
KDM4B-207ENST00000588961 UBAP1LF5GYI3 381 aa12.21□□□□□ -0.45
KDM4B-207ENST00000588961 C14orf37Q86TY3 774 aa12.21□□□□□ -0.45
KDM4B-207ENST00000588961 IQSEC2Q5JU85 1478 aa12.21□□□□□ -0.46
KDM4B-207ENST00000588961 XIRP1Q702N8 1843 aaKnown RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms