RNA–Protein interactions for RNA: ENST00000588656.1

CHUK-203, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 3

Gene CHUK, Length 675 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-203ENST00000588656 TMC2Q8TDI7 906 aa9.37□□□□□ -0.91
CHUK-203ENST00000588656 EFCAB5A4FU69 1503 aa9.35□□□□□ -0.91
CHUK-203ENST00000588656 ZMYM4Q5VZL5 1548 aa9.35□□□□□ -0.91
CHUK-203ENST00000588656 PLEKHD1A6NEE1 506 aa9.34□□□□□ -0.91
CHUK-203ENST00000588656 SLC34A2O95436 690 aa9.34□□□□□ -0.91
CHUK-203ENST00000588656 HS6ST3Q8IZP7 471 aa9.34□□□□□ -0.91
CHUK-203ENST00000588656 PREX1Q8TCU6 1659 aa9.34□□□□□ -0.91
CHUK-203ENST00000588656 ZNF316A6NFI3 1004 aaPredicted RBP9.33□□□□□ -0.92
CHUK-203ENST00000588656 PPP1R37O75864 691 aa9.33□□□□□ -0.92
CHUK-203ENST00000588656 PHLDB1Q86UU1 1377 aa9.33□□□□□ -0.92
CHUK-203ENST00000588656 CDC42BPBQ9Y5S2 1711 aa9.33□□□□□ -0.92
CHUK-203ENST00000588656 STRCQ7RTU9 1775 aa9.32□□□□□ -0.92
CHUK-203ENST00000588656 CEBPAP49715 358 aaPredicted RBP9.32□□□□□ -0.92
CHUK-203ENST00000588656 SCAPERQ9BY12 1400 aa9.31□□□□□ -0.92
CHUK-203ENST00000588656 KHSRPQ92945 711 aaKnown RBP eCLIP9.31□□□□□ -0.92
CHUK-203ENST00000588656 POGZQ7Z3K3 1410 aa9.31□□□□□ -0.92
CHUK-203ENST00000588656 C3P01024 1663 aa9.3□□□□□ -0.92
CHUK-203ENST00000588656 MYT1LQ9UL68 1186 aa9.3□□□□□ -0.92
CHUK-203ENST00000588656 ABCA6Q8N139 1617 aa9.3□□□□□ -0.92
CHUK-203ENST00000588656 ARHGAP5Q13017 1502 aa9.3□□□□□ -0.92
CHUK-203ENST00000588656 ARHGEF12Q9NZN5 1544 aa9.29□□□□□ -0.92
CHUK-203ENST00000588656 ARHGAP35Q9NRY4 1499 aa9.28□□□□□ -0.92
CHUK-203ENST00000588656 CHGAP10645 457 aaKnown RBP9.28□□□□□ -0.92
CHUK-203ENST00000588656 UBTFP17480 764 aaKnown RBP9.28□□□□□ -0.92
CHUK-203ENST00000588656 PCDHGA4Q9Y5G9 962 aa9.28□□□□□ -0.92
CHUK-203ENST00000588656 ITSN2Q9NZM3 1697 aa9.28□□□□□ -0.92
CHUK-203ENST00000588656 EEA1Q15075 1411 aa9.28□□□□□ -0.92
CHUK-203ENST00000588656 DIP2CQ9Y2E4 1556 aa9.28□□□□□ -0.92
CHUK-203ENST00000588656 CDC42BPAQ5VT25 1732 aa9.28□□□□□ -0.92
CHUK-203ENST00000588656 NUDT7P0C024 238 aa9.27□□□□□ -0.93
CHUK-203ENST00000588656 PTGER2P43116 358 aa9.27□□□□□ -0.93
CHUK-203ENST00000588656 PLCH2O75038 1416 aa9.27□□□□□ -0.93
CHUK-203ENST00000588656 SUPT6HQ7KZ85 1726 aaKnown RBP9.26□□□□□ -0.93
CHUK-203ENST00000588656 C9orf84Q5VXU9 1444 aa9.26□□□□□ -0.93
CHUK-203ENST00000588656 RYDENQ9NUL5 291 aaKnown RBP9.26□□□□□ -0.93
CHUK-203ENST00000588656 PREX2Q70Z35 1606 aa9.26□□□□□ -0.93
CHUK-203ENST00000588656 ATP10AO60312 1499 aa9.26□□□□□ -0.93
CHUK-203ENST00000588656 AFAP1Q8N556 730 aa9.25□□□□□ -0.93
CHUK-203ENST00000588656 CERKQ8TCT0 537 aa9.25□□□□□ -0.93
CHUK-203ENST00000588656 KDM5CP41229 1560 aa9.24□□□□□ -0.93
CHUK-203ENST00000588656 KIDINS220Q9ULH0 1771 aa9.24□□□□□ -0.93
CHUK-203ENST00000588656 MAGI2Q86UL8 1455 aa9.24□□□□□ -0.93
CHUK-203ENST00000588656 ANKRD13DQ6ZTN6 518 aa9.24□□□□□ -0.93
CHUK-203ENST00000588656 RNF166Q96A37 237 aaPredicted RBP9.24□□□□□ -0.93
CHUK-203ENST00000588656 GPHNQ9NQX3 736 aaPredicted RBP9.24□□□□□ -0.93
CHUK-203ENST00000588656 SETD1BQ9UPS6 1966 aaKnown RBP9.24□□□□□ -0.93
CHUK-203ENST00000588656 PBX2P40425 430 aa9.23□□□□□ -0.93
CHUK-203ENST00000588656 FOXK1P85037 733 aa9.23□□□□□ -0.93
CHUK-203ENST00000588656 LHX6Q9UPM6 363 aa9.23□□□□□ -0.93
CHUK-203ENST00000588656 ZNF518AQ6AHZ1 1483 aa9.22□□□□□ -0.93
CHUK-203ENST00000588656 ABCC1P33527 1531 aa9.22□□□□□ -0.93
CHUK-203ENST00000588656 PSDA5PKW4 1024 aaPredicted RBP9.22□□□□□ -0.93
CHUK-203ENST00000588656 PTCD2Q8WV60 388 aaKnown RBP9.22□□□□□ -0.93
CHUK-203ENST00000588656 CLTCQ00610 1675 aaKnown RBP9.22□□□□□ -0.93
CHUK-203ENST00000588656 TROQ12816 1431 aaPredicted RBP9.22□□□□□ -0.93
CHUK-203ENST00000588656 FMN1Q68DA7 1419 aa9.22□□□□□ -0.93
CHUK-203ENST00000588656 TRAPPC8Q9Y2L5 1435 aa9.22□□□□□ -0.93
CHUK-203ENST00000588656 EFCAB2Q5VUJ9 269 aa9.21□□□□□ -0.94
CHUK-203ENST00000588656 UHRF1BP1Q6BDS2 1440 aa9.21□□□□□ -0.94
CHUK-203ENST00000588656 TBC1D12O60347 775 aa9.2□□□□□ -0.94
CHUK-203ENST00000588656 LSM11P83369 360 aaKnown RBP eCLIP9.2□□□□□ -0.94
CHUK-203ENST00000588656 ILDR2Q71H61 639 aa9.2□□□□□ -0.94
CHUK-203ENST00000588656 PLPP6Q8IY26 295 aa9.2□□□□□ -0.94
CHUK-203ENST00000588656 DISP3Q9P2K9 1392 aa9.2□□□□□ -0.94
CHUK-203ENST00000588656 CLIP1P30622 1438 aa9.2□□□□□ -0.94
CHUK-203ENST00000588656 SAMD9LQ8IVG5 1584 aa9.2□□□□□ -0.94
CHUK-203ENST00000588656 ZNF777Q9ULD5 760 aaPredicted RBP9.19□□□□□ -0.94
CHUK-203ENST00000588656 SYCP2Q9BX26 1530 aa9.19□□□□□ -0.94
CHUK-203ENST00000588656 SPATA31D1Q6ZQQ2 1576 aa9.19□□□□□ -0.94
CHUK-203ENST00000588656 CAMSAP1Q5T5Y3 1602 aa9.16□□□□□ -0.94
CHUK-203ENST00000588656 MYO3AQ8NEV4 1616 aa9.16□□□□□ -0.94
CHUK-203ENST00000588656 REREQ9P2R6 1566 aa9.16□□□□□ -0.94
CHUK-203ENST00000588656 DSG2Q14126 1118 aa9.16□□□□□ -0.94
CHUK-203ENST00000588656 NKX1-1Q15270 411 aaPredicted RBP9.16□□□□□ -0.94
CHUK-203ENST00000588656 CDK11AQ9UQ88 783 aaPredicted RBP9.16□□□□□ -0.94
CHUK-203ENST00000588656 ESF1Q9H501 851 aaKnown RBP9.15□□□□□ -0.94
CHUK-203ENST00000588656 MROH2AA6NES4 1674 aa9.15□□□□□ -0.94
CHUK-203ENST00000588656 LTBP4Q8N2S1 1624 aa9.15□□□□□ -0.94
CHUK-203ENST00000588656 MLH3Q9UHC1 1453 aa9.15□□□□□ -0.95
CHUK-203ENST00000588656 ARHGAP33O14559 1287 aa9.14□□□□□ -0.95
CHUK-203ENST00000588656 CCDC18Q5T9S5 1454 aa9.14□□□□□ -0.95
CHUK-203ENST00000588656 HNRNPMP52272 730 aaKnown RBP eCLIP9.13□□□□□ -0.95
CHUK-203ENST00000588656 POTEEQ6S8J3 1075 aa9.13□□□□□ -0.95
CHUK-203ENST00000588656 AXIN2Q9Y2T1 843 aa9.13□□□□□ -0.95
CHUK-203ENST00000588656 AGLP35573 1532 aa9.13□□□□□ -0.95
CHUK-203ENST00000588656 ATP7AQ04656 1500 aa9.13□□□□□ -0.95
CHUK-203ENST00000588656 CFAP65Q6ZU64 1925 aaKnown RBP9.13□□□□□ -0.95
CHUK-203ENST00000588656 ZNF142P52746 1687 aaPredicted RBP9.13□□□□□ -0.95
CHUK-203ENST00000588656 ADGBQ8N7X0 1667 aa9.13□□□□□ -0.95
CHUK-203ENST00000588656 CASKIN1Q8WXD9 1431 aa9.13□□□□□ -0.95
CHUK-203ENST00000588656 INO80Q9ULG1 1556 aaPredicted RBP9.12□□□□□ -0.95
CHUK-203ENST00000588656 NCKAP5LQ9HCH0 1330 aa9.12□□□□□ -0.95
CHUK-203ENST00000588656 NCOA1Q15788 1441 aa9.12□□□□□ -0.95
CHUK-203ENST00000588656 POLR1AO95602 1720 aaPredicted RBP9.11□□□□□ -0.95
CHUK-203ENST00000588656 ZNF335Q9H4Z2 1342 aaPredicted RBP9.1□□□□□ -0.95
CHUK-203ENST00000588656 FYCO1Q9BQS8 1478 aa9.1□□□□□ -0.95
CHUK-203ENST00000588656 PDE4AP27815 886 aa9.1□□□□□ -0.95
CHUK-203ENST00000588656 PTPRTO14522 1441 aa9.1□□□□□ -0.95
CHUK-203ENST00000588656 PLXNC1O60486 1568 aa9.1□□□□□ -0.95
CHUK-203ENST00000588656 CEP170BQ9Y4F5 1589 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms