RNA–Protein interactions for RNA: ENST00000588642.1

NLE1-205, Transcript of notchless homolog 1, humanhuman

TSL 2

Gene NLE1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-205ENST00000588642 RIMS2Q9UQ26 1411 aa19.93■□□□□ 0.78
NLE1-205ENST00000588642 MYOM2P54296 1465 aa19.91■□□□□ 0.78
NLE1-205ENST00000588642 TMEM2Q9UHN6 1383 aa19.9■□□□□ 0.78
NLE1-205ENST00000588642 NEXMIFQ5QGS0 1516 aa19.88■□□□□ 0.77
NLE1-205ENST00000588642 ZFYVE9O95405 1425 aa19.88■□□□□ 0.77
NLE1-205ENST00000588642 NBPF1Q3BBV0 1214 aa19.88■□□□□ 0.77
NLE1-205ENST00000588642 CFAP70Q5T0N1 1121 aa19.88■□□□□ 0.77
NLE1-205ENST00000588642 CARD11Q9BXL7 1154 aa19.88■□□□□ 0.77
NLE1-205ENST00000588642 SENP3Q9H4L4 574 aaPredicted RBP19.88■□□□□ 0.77
NLE1-205ENST00000588642 EID1Q9Y6B2 187 aa19.88■□□□□ 0.77
NLE1-205ENST00000588642 ROCK2O75116 1388 aaKnown RBP19.87■□□□□ 0.77
NLE1-205ENST00000588642 TXNDC2Q86VQ3 553 aa19.87■□□□□ 0.77
NLE1-205ENST00000588642 MYO3AQ8NEV4 1616 aa19.86■□□□□ 0.77
NLE1-205ENST00000588642 RALGAPBQ86X10 1494 aa19.86■□□□□ 0.77
NLE1-205ENST00000588642 BCANQ96GW7 911 aa19.85■□□□□ 0.77
NLE1-205ENST00000588642 C14orf93Q9H972 538 aaKnown RBP19.85■□□□□ 0.77
NLE1-205ENST00000588642 NRXN1Q9ULB1 1477 aa19.85■□□□□ 0.77
NLE1-205ENST00000588642 CEP170BQ9Y4F5 1589 aaPredicted RBP19.84■□□□□ 0.77
NLE1-205ENST00000588642 EIF4G2P78344 907 aaKnown RBP eCLIP19.84■□□□□ 0.77
NLE1-205ENST00000588642 UBR1Q8IWV7 1749 aa19.84■□□□□ 0.77
NLE1-205ENST00000588642 LTKP29376 864 aa19.83■□□□□ 0.77
NLE1-205ENST00000588642 KDM5AP29375 1690 aaKnown RBP19.83■□□□□ 0.76
NLE1-205ENST00000588642 PIK3C2GO75747 1445 aa19.83■□□□□ 0.76
NLE1-205ENST00000588642 PPLO60437 1756 aa19.83■□□□□ 0.76
NLE1-205ENST00000588642 MYO5BQ9ULV0 1848 aa19.82■□□□□ 0.76
NLE1-205ENST00000588642 IFT172Q9UG01 1749 aa19.82■□□□□ 0.76
NLE1-205ENST00000588642 ZNF316A6NFI3 1004 aaPredicted RBP19.81■□□□□ 0.76
NLE1-205ENST00000588642 HSPA5P11021 654 aaKnown RBP19.81■□□□□ 0.76
NLE1-205ENST00000588642 ANKLE2Q86XL3 938 aa19.81■□□□□ 0.76
NLE1-205ENST00000588642 SETD1BQ9UPS6 1966 aaKnown RBP19.81■□□□□ 0.76
NLE1-205ENST00000588642 HIRIP3Q9BW71 556 aaPredicted RBP19.8■□□□□ 0.76
NLE1-205ENST00000588642 GPRASP1Q5JY77 1395 aa19.8■□□□□ 0.76
NLE1-205ENST00000588642 ARHGAP23Q9P227 1491 aa19.79■□□□□ 0.76
NLE1-205ENST00000588642 SLIT1O75093 1534 aa19.79■□□□□ 0.76
NLE1-205ENST00000588642 TMEM132EQ6IEE7 984 aa19.78■□□□□ 0.76
NLE1-205ENST00000588642 TRPM1Q7Z4N2 1603 aa19.77■□□□□ 0.76
NLE1-205ENST00000588642 USP47Q96K76 1375 aa19.77■□□□□ 0.76
NLE1-205ENST00000588642 PLEKHG1Q9ULL1 1385 aa19.76■□□□□ 0.75
NLE1-205ENST00000588642 ZNF142P52746 1687 aaPredicted RBP19.75■□□□□ 0.75
NLE1-205ENST00000588642 SCAF11Q99590 1463 aaKnown RBP19.74■□□□□ 0.75
NLE1-205ENST00000588642 SLC26A8Q96RN1 970 aa19.72■□□□□ 0.75
NLE1-205ENST00000588642 STK26Q9P289 416 aa19.72■□□□□ 0.75
NLE1-205ENST00000588642 ST20-MTHFSA0A0A6YYL1 179 aa19.71■□□□□ 0.75
NLE1-205ENST00000588642 HSPA2P54652 639 aa19.71■□□□□ 0.75
NLE1-205ENST00000588642 TRAK1Q9UPV9 953 aa19.71■□□□□ 0.75
NLE1-205ENST00000588642 NCKAP5LQ9HCH0 1330 aa19.71■□□□□ 0.75
NLE1-205ENST00000588642 KIAA1210Q9ULL0 1709 aa19.71■□□□□ 0.75
NLE1-205ENST00000588642 ALKQ9UM73 1620 aa19.7■□□□□ 0.74
NLE1-205ENST00000588642 TBX22Q9Y458 520 aa19.69■□□□□ 0.74
NLE1-205ENST00000588642 SETBP1Q9Y6X0 1596 aa19.68■□□□□ 0.74
NLE1-205ENST00000588642 METP08581 1390 aa19.67■□□□□ 0.74
NLE1-205ENST00000588642 EIF3AQ14152 1382 aaKnown RBP19.67■□□□□ 0.74
NLE1-205ENST00000588642 ADAMTS13Q76LX8 1427 aa19.67■□□□□ 0.74
NLE1-205ENST00000588642 ADGRB1O14514 1584 aa19.66■□□□□ 0.74
NLE1-205ENST00000588642 LAMC1P11047 1609 aa19.66■□□□□ 0.74
NLE1-205ENST00000588642 YTHDC2Q9H6S0 1430 aaKnown RBP19.65■□□□□ 0.74
NLE1-205ENST00000588642 LRPPRCP42704 1394 aaKnown RBP19.64■□□□□ 0.73
NLE1-205ENST00000588642 NPHP4O75161 1426 aaPredicted RBP19.64■□□□□ 0.73
NLE1-205ENST00000588642 LMTK3Q96Q04 1460 aa19.63■□□□□ 0.73
NLE1-205ENST00000588642 MED14O60244 1454 aa19.62■□□□□ 0.73
NLE1-205ENST00000588642 CENPJQ9HC77 1338 aaPredicted RBP19.62■□□□□ 0.73
NLE1-205ENST00000588642 POGKQ9P215 609 aa19.62■□□□□ 0.73
NLE1-205ENST00000588642 NRXN3Q9Y4C0 1643 aa19.62■□□□□ 0.73
NLE1-205ENST00000588642 ASXL1Q8IXJ9 1541 aa19.61■□□□□ 0.73
NLE1-205ENST00000588642 ABCC11Q96J66 1382 aa19.6■□□□□ 0.73
NLE1-205ENST00000588642 IQGAP1P46940 1657 aa19.6■□□□□ 0.73
NLE1-205ENST00000588642 TESK2Q96S53 571 aa19.6■□□□□ 0.73
NLE1-205ENST00000588642 C11orf95C9JLR9 678 aaPredicted RBP19.59■□□□□ 0.73
NLE1-205ENST00000588642 PRAM1Q96QH2 718 aa19.59■□□□□ 0.73
NLE1-205ENST00000588642 AMOTL2Q9Y2J4 779 aa19.59■□□□□ 0.73
NLE1-205ENST00000588642 SLC24A1O60721 1099 aa19.58■□□□□ 0.72
NLE1-205ENST00000588642 TMF1P82094 1093 aa19.58■□□□□ 0.72
NLE1-205ENST00000588642 SAFB2Q14151 953 aaKnown RBP eCLIP19.58■□□□□ 0.72
NLE1-205ENST00000588642 SIRT1Q96EB6 747 aa19.57■□□□□ 0.72
NLE1-205ENST00000588642 POLR3GLQ9BT43 218 aa19.57■□□□□ 0.72
NLE1-205ENST00000588642 DIP2AQ14689 1571 aa19.57■□□□□ 0.72
NLE1-205ENST00000588642 PIK3R4Q99570 1358 aa19.56■□□□□ 0.72
NLE1-205ENST00000588642 WAPLQ7Z5K2 1190 aa19.55■□□□□ 0.72
NLE1-205ENST00000588642 WASHC2AQ641Q2 1341 aa19.54■□□□□ 0.72
NLE1-205ENST00000588642 PTPRUQ92729 1446 aa19.54■□□□□ 0.72
NLE1-205ENST00000588642 CCDC7Q96M83 1385 aa19.54■□□□□ 0.72
NLE1-205ENST00000588642 SETD1AO15047 1707 aaKnown RBP19.54■□□□□ 0.72
NLE1-205ENST00000588642 KIF7Q2M1P5 1343 aa19.53■□□□□ 0.72
NLE1-205ENST00000588642 DDX10Q13206 875 aaKnown RBP19.52■□□□□ 0.72
NLE1-205ENST00000588642 CDCA8Q53HL2 280 aa19.52■□□□□ 0.72
NLE1-205ENST00000588642 AEBP2Q6ZN18 517 aaPredicted RBP19.52■□□□□ 0.72
NLE1-205ENST00000588642 MINK1Q8N4C8 1332 aaPredicted RBP19.51■□□□□ 0.71
NLE1-205ENST00000588642 DLC1Q96QB1 1528 aa19.51■□□□□ 0.71
NLE1-205ENST00000588642 KCNA6P17658 529 aa19.51■□□□□ 0.71
NLE1-205ENST00000588642 TECPR2O15040 1411 aa19.51■□□□□ 0.71
NLE1-205ENST00000588642 ROBO2Q9HCK4 1378 aa19.5■□□□□ 0.71
NLE1-205ENST00000588642 DISP3Q9P2K9 1392 aa19.5■□□□□ 0.71
NLE1-205ENST00000588642 PLEKHH1Q9ULM0 1364 aa19.5■□□□□ 0.71
NLE1-205ENST00000588642 SBNO2Q9Y2G9 1366 aa19.5■□□□□ 0.71
NLE1-205ENST00000588642 POLR1AO95602 1720 aaPredicted RBP19.5■□□□□ 0.71
NLE1-205ENST00000588642 FAM135BQ49AJ0 1406 aa19.5■□□□□ 0.71
NLE1-205ENST00000588642 DMRT2Q9Y5R5 561 aa19.48■□□□□ 0.71
NLE1-205ENST00000588642 EVC2Q86UK5 1308 aa19.48■□□□□ 0.71
NLE1-205ENST00000588642 DIEXFQ68CQ4 756 aaKnown RBP19.46■□□□□ 0.71
NLE1-205ENST00000588642 ARHGEF28Q8N1W1 1705 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms