RNA–Protein interactions for RNA: ENST00000588289.1

TMED1-204, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2 BASIC

Gene TMED1, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-204ENST00000588289 ZMYM3Q14202 1370 aa17.8■□□□□ 0.44
TMED1-204ENST00000588289 CARD11Q9BXL7 1154 aa17.79■□□□□ 0.44
TMED1-204ENST00000588289 MYO5BQ9ULV0 1848 aa17.79■□□□□ 0.44
TMED1-204ENST00000588289 HDGFP51858 240 aaKnown RBP17.78■□□□□ 0.44
TMED1-204ENST00000588289 NBPF8Q3BBV2 869 aa17.78■□□□□ 0.44
TMED1-204ENST00000588289 DIEXFQ68CQ4 756 aaKnown RBP17.78■□□□□ 0.44
TMED1-204ENST00000588289 CERKQ8TCT0 537 aa17.78■□□□□ 0.44
TMED1-204ENST00000588289 TMEM131LA2VDJ0 1609 aa17.77■□□□□ 0.44
TMED1-204ENST00000588289 VGFO15240 615 aaPredicted RBP17.77■□□□□ 0.44
TMED1-204ENST00000588289 C3P01024 1663 aa17.77■□□□□ 0.43
TMED1-204ENST00000588289 SLC24A1O60721 1099 aa17.76■□□□□ 0.43
TMED1-204ENST00000588289 EIF3AQ14152 1382 aaKnown RBP17.76■□□□□ 0.43
TMED1-204ENST00000588289 TNRQ92752 1358 aa17.76■□□□□ 0.43
TMED1-204ENST00000588289 NLRP1Q9C000 1473 aa17.75■□□□□ 0.43
TMED1-204ENST00000588289 USP47Q96K76 1375 aa17.75■□□□□ 0.43
TMED1-204ENST00000588289 ADAMTSL3P82987 1691 aa17.74■□□□□ 0.43
TMED1-204ENST00000588289 GPRASP1Q5JY77 1395 aa17.74■□□□□ 0.43
TMED1-204ENST00000588289 HSPA5P11021 654 aaKnown RBP17.73■□□□□ 0.43
TMED1-204ENST00000588289 IDI1Q13907 227 aa17.73■□□□□ 0.43
TMED1-204ENST00000588289 ZFYVE9O95405 1425 aa17.72■□□□□ 0.43
TMED1-204ENST00000588289 RIMS1Q86UR5 1692 aaKnown RBP17.72■□□□□ 0.43
TMED1-204ENST00000588289 NEXMIFQ5QGS0 1516 aa17.72■□□□□ 0.43
TMED1-204ENST00000588289 SETBP1Q9Y6X0 1596 aa17.71■□□□□ 0.43
TMED1-204ENST00000588289 NRXN1Q9ULB1 1477 aa17.71■□□□□ 0.43
TMED1-204ENST00000588289 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.71■□□□□ 0.43
TMED1-204ENST00000588289 SETD1BQ9UPS6 1966 aaKnown RBP17.7■□□□□ 0.42
TMED1-204ENST00000588289 IQGAP1P46940 1657 aa17.69■□□□□ 0.42
TMED1-204ENST00000588289 FBXO31Q5XUX0 539 aaPredicted RBP17.69■□□□□ 0.42
TMED1-204ENST00000588289 HSPA2P54652 639 aa17.68■□□□□ 0.42
TMED1-204ENST00000588289 UBR1Q8IWV7 1749 aa17.67■□□□□ 0.42
TMED1-204ENST00000588289 PIK3C2GO75747 1445 aa17.67■□□□□ 0.42
TMED1-204ENST00000588289 SCAF11Q99590 1463 aaKnown RBP17.67■□□□□ 0.42
TMED1-204ENST00000588289 A2ML1A8K2U0 1454 aa17.65■□□□□ 0.42
TMED1-204ENST00000588289 MYO3AQ8NEV4 1616 aa17.64■□□□□ 0.41
TMED1-204ENST00000588289 CDCA8Q53HL2 280 aa17.63■□□□□ 0.41
TMED1-204ENST00000588289 RIMS2Q9UQ26 1411 aa17.62■□□□□ 0.41
TMED1-204ENST00000588289 ADGRF5Q8IZF2 1346 aa17.61■□□□□ 0.41
TMED1-204ENST00000588289 EID1Q9Y6B2 187 aa17.6■□□□□ 0.41
TMED1-204ENST00000588289 ZNF142P52746 1687 aaPredicted RBP17.59■□□□□ 0.41
TMED1-204ENST00000588289 HIRIP3Q9BW71 556 aaPredicted RBP17.59■□□□□ 0.41
TMED1-204ENST00000588289 C14orf93Q9H972 538 aaKnown RBP17.59■□□□□ 0.41
TMED1-204ENST00000588289 CCDC7Q96M83 1385 aa17.58■□□□□ 0.4
TMED1-204ENST00000588289 TMF1P82094 1093 aa17.58■□□□□ 0.4
TMED1-204ENST00000588289 NBPF1Q3BBV0 1214 aa17.58■□□□□ 0.4
TMED1-204ENST00000588289 THEMISQ8N1K5 641 aaPredicted RBP17.58■□□□□ 0.4
TMED1-204ENST00000588289 ST20-MTHFSA0A0A6YYL1 179 aa17.57■□□□□ 0.4
TMED1-204ENST00000588289 CEP170BQ9Y4F5 1589 aaPredicted RBP17.57■□□□□ 0.4
TMED1-204ENST00000588289 CFAP70Q5T0N1 1121 aa17.56■□□□□ 0.4
TMED1-204ENST00000588289 TMEM2Q9UHN6 1383 aa17.55■□□□□ 0.4
TMED1-204ENST00000588289 DDX10Q13206 875 aaKnown RBP17.55■□□□□ 0.4
TMED1-204ENST00000588289 ALKQ9UM73 1620 aa17.54■□□□□ 0.4
TMED1-204ENST00000588289 SLIT1O75093 1534 aa17.53■□□□□ 0.4
TMED1-204ENST00000588289 QRICH2Q9H0J4 1663 aa17.53■□□□□ 0.4
TMED1-204ENST00000588289 ANP32CO43423 234 aa17.53■□□□□ 0.4
TMED1-204ENST00000588289 CEBPAP49715 358 aaPredicted RBP17.53■□□□□ 0.4
TMED1-204ENST00000588289 PLPPR3Q6T4P5 718 aa17.53■□□□□ 0.4
TMED1-204ENST00000588289 ADGRB1O14514 1584 aa17.53■□□□□ 0.4
TMED1-204ENST00000588289 SBNO2Q9Y2G9 1366 aa17.53■□□□□ 0.4
TMED1-204ENST00000588289 WASHC2AQ641Q2 1341 aa17.52■□□□□ 0.4
TMED1-204ENST00000588289 BCANQ96GW7 911 aa17.52■□□□□ 0.4
TMED1-204ENST00000588289 ARHGEF28Q8N1W1 1705 aaKnown RBP17.52■□□□□ 0.39
TMED1-204ENST00000588289 KIF7Q2M1P5 1343 aa17.51■□□□□ 0.39
TMED1-204ENST00000588289 DIP2AQ14689 1571 aa17.51■□□□□ 0.39
TMED1-204ENST00000588289 CENPJQ9HC77 1338 aaPredicted RBP17.5■□□□□ 0.39
TMED1-204ENST00000588289 NUTM2DQ5VT03 806 aaPredicted RBP17.49■□□□□ 0.39
TMED1-204ENST00000588289 POLR3GLQ9BT43 218 aa17.49■□□□□ 0.39
TMED1-204ENST00000588289 PLEKHG1Q9ULL1 1385 aa17.49■□□□□ 0.39
TMED1-204ENST00000588289 ARHGAP23Q9P227 1491 aa17.49■□□□□ 0.39
TMED1-204ENST00000588289 KNDC1Q76NI1 1749 aa17.48■□□□□ 0.39
TMED1-204ENST00000588289 SETD1AO15047 1707 aaKnown RBP17.47■□□□□ 0.39
TMED1-204ENST00000588289 DLC1Q96QB1 1528 aa17.47■□□□□ 0.39
TMED1-204ENST00000588289 YTHDC2Q9H6S0 1430 aaKnown RBP17.46■□□□□ 0.39
TMED1-204ENST00000588289 TXNDC2Q86VQ3 553 aa17.45■□□□□ 0.38
TMED1-204ENST00000588289 TRAK1Q9UPV9 953 aa17.45■□□□□ 0.38
TMED1-204ENST00000588289 NRXN3Q9Y4C0 1643 aa17.44■□□□□ 0.38
TMED1-204ENST00000588289 TESK2Q96S53 571 aa17.43■□□□□ 0.38
TMED1-204ENST00000588289 POGKQ9P215 609 aa17.43■□□□□ 0.38
TMED1-204ENST00000588289 LRPPRCP42704 1394 aaKnown RBP17.42■□□□□ 0.38
TMED1-204ENST00000588289 ANKLE2Q86XL3 938 aa17.42■□□□□ 0.38
TMED1-204ENST00000588289 EVC2Q86UK5 1308 aa17.42■□□□□ 0.38
TMED1-204ENST00000588289 TMEM132EQ6IEE7 984 aa17.41■□□□□ 0.38
TMED1-204ENST00000588289 PUS7Q96PZ0 661 aaKnown RBP17.41■□□□□ 0.38
TMED1-204ENST00000588289 ASXL1Q8IXJ9 1541 aa17.4■□□□□ 0.38
TMED1-204ENST00000588289 KTN1Q86UP2 1357 aaKnown RBP17.4■□□□□ 0.38
TMED1-204ENST00000588289 ABCC11Q96J66 1382 aa17.4■□□□□ 0.38
TMED1-204ENST00000588289 MIER1Q8N108 512 aa17.39■□□□□ 0.37
TMED1-204ENST00000588289 CPS1P31327 1500 aa17.38■□□□□ 0.37
TMED1-204ENST00000588289 C11orf95C9JLR9 678 aaPredicted RBP17.38■□□□□ 0.37
TMED1-204ENST00000588289 SIRT1Q96EB6 747 aa17.38■□□□□ 0.37
TMED1-204ENST00000588289 PIK3R4Q99570 1358 aa17.38■□□□□ 0.37
TMED1-204ENST00000588289 NINLQ9Y2I6 1382 aa17.38■□□□□ 0.37
TMED1-204ENST00000588289 STK26Q9P289 416 aa17.37■□□□□ 0.37
TMED1-204ENST00000588289 TECPR2O15040 1411 aa17.37■□□□□ 0.37
TMED1-204ENST00000588289 FAM135BQ49AJ0 1406 aa17.37■□□□□ 0.37
TMED1-204ENST00000588289 STRCQ7RTU9 1775 aa17.36■□□□□ 0.37
TMED1-204ENST00000588289 CCER2I3L3R5 266 aa17.36■□□□□ 0.37
TMED1-204ENST00000588289 TBX22Q9Y458 520 aa17.36■□□□□ 0.37
TMED1-204ENST00000588289 ADAMTS13Q76LX8 1427 aa17.33■□□□□ 0.36
TMED1-204ENST00000588289 ATAD2Q6PL18 1390 aa17.33■□□□□ 0.36
TMED1-204ENST00000588289 LTKP29376 864 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms