RNA–Protein interactions for RNA: ENST00000588216.5

TNPO2-210, Transcript of transportin 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNPO2, Length 3,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-210ENST00000588216 COL17A1Q9UMD9 1497 aaPredicted RBP16.43■□□□□ 0.22
TNPO2-210ENST00000588216 IDI1Q13907 227 aa16.42■□□□□ 0.22
TNPO2-210ENST00000588216 ABCC3O15438 1527 aa16.42■□□□□ 0.22
TNPO2-210ENST00000588216 RNF17Q9BXT8 1623 aaKnown RBP16.42■□□□□ 0.22
TNPO2-210ENST00000588216 TMEM132EQ6IEE7 984 aa16.41■□□□□ 0.22
TNPO2-210ENST00000588216 NOS1P29475 1434 aa16.41■□□□□ 0.22
TNPO2-210ENST00000588216 TMF1P82094 1093 aa16.4■□□□□ 0.22
TNPO2-210ENST00000588216 ARID4BQ4LE39 1312 aaPredicted RBP16.4■□□□□ 0.22
TNPO2-210ENST00000588216 LMTK2Q8IWU2 1503 aa16.39■□□□□ 0.21
TNPO2-210ENST00000588216 ERICH6BQ5W0A0 696 aa16.39■□□□□ 0.21
TNPO2-210ENST00000588216 TRHP20396 242 aaPredicted RBP16.39■□□□□ 0.21
TNPO2-210ENST00000588216 TRAK1Q9UPV9 953 aa16.38■□□□□ 0.21
TNPO2-210ENST00000588216 IRX6P78412 446 aaPredicted RBP16.37■□□□□ 0.21
TNPO2-210ENST00000588216 MADDQ8WXG6 1647 aa16.37■□□□□ 0.21
TNPO2-210ENST00000588216 PANK3Q9H999 370 aa16.37■□□□□ 0.21
TNPO2-210ENST00000588216 CC2D1BQ5T0F9 858 aaKnown RBP16.37■□□□□ 0.21
TNPO2-210ENST00000588216 PLPPR3Q6T4P5 718 aa16.36■□□□□ 0.21
TNPO2-210ENST00000588216 POLR1AO95602 1720 aaPredicted RBP16.36■□□□□ 0.21
TNPO2-210ENST00000588216 STAC3Q96MF2 364 aa16.35■□□□□ 0.21
TNPO2-210ENST00000588216 ANO8Q9HCE9 1232 aaPredicted RBP16.35■□□□□ 0.21
TNPO2-210ENST00000588216 STAG3Q9UJ98 1225 aa16.35■□□□□ 0.21
TNPO2-210ENST00000588216 MROH2AA6NES4 1674 aa16.35■□□□□ 0.21
TNPO2-210ENST00000588216 KIF1BO60333 1816 aa16.35■□□□□ 0.21
TNPO2-210ENST00000588216 SIGLEC1Q9BZZ2 1709 aa16.33■□□□□ 0.2
TNPO2-210ENST00000588216 CAMSAP1Q5T5Y3 1602 aa16.33■□□□□ 0.2
TNPO2-210ENST00000588216 KIF13AQ9H1H9 1805 aa16.32■□□□□ 0.2
TNPO2-210ENST00000588216 SAFB2Q14151 953 aaKnown RBP eCLIP16.32■□□□□ 0.2
TNPO2-210ENST00000588216 ESF1Q9H501 851 aaKnown RBP16.32■□□□□ 0.2
TNPO2-210ENST00000588216 SCAF11Q99590 1463 aaKnown RBP16.32■□□□□ 0.2
TNPO2-210ENST00000588216 TMC1Q8TDI8 760 aa16.32■□□□□ 0.2
TNPO2-210ENST00000588216 STK26Q9P289 416 aa16.31■□□□□ 0.2
TNPO2-210ENST00000588216 PER1O15534 1290 aaPredicted RBP16.3■□□□□ 0.2
TNPO2-210ENST00000588216 SLC52A1Q9NWF4 448 aa16.3■□□□□ 0.2
TNPO2-210ENST00000588216 ZMYM4Q5VZL5 1548 aa16.29■□□□□ 0.2
TNPO2-210ENST00000588216 ADGRB3O60242 1522 aa16.29■□□□□ 0.2
TNPO2-210ENST00000588216 SYNMO15061 1565 aa16.29■□□□□ 0.2
TNPO2-210ENST00000588216 VGFO15240 615 aaPredicted RBP16.29■□□□□ 0.2
TNPO2-210ENST00000588216 C14orf93Q9H972 538 aaKnown RBP16.29■□□□□ 0.2
TNPO2-210ENST00000588216 MYOM2P54296 1465 aa16.26■□□□□ 0.19
TNPO2-210ENST00000588216 EIF3AQ14152 1382 aaKnown RBP16.26■□□□□ 0.19
TNPO2-210ENST00000588216 ARHGAP31Q2M1Z3 1444 aa16.26■□□□□ 0.19
TNPO2-210ENST00000588216 NOP58Q9Y2X3 529 aaKnown RBP16.25■□□□□ 0.19
TNPO2-210ENST00000588216 LAMC1P11047 1609 aa16.25■□□□□ 0.19
TNPO2-210ENST00000588216 RPGRIP1LQ68CZ1 1315 aa16.25■□□□□ 0.19
TNPO2-210ENST00000588216 PPP4R2Q9NY27 417 aa16.25■□□□□ 0.19
TNPO2-210ENST00000588216 CENPJQ9HC77 1338 aaPredicted RBP16.24■□□□□ 0.19
TNPO2-210ENST00000588216 KNSTRNQ9Y448 316 aa16.24■□□□□ 0.19
TNPO2-210ENST00000588216 KTN1Q86UP2 1357 aaKnown RBP16.24■□□□□ 0.19
TNPO2-210ENST00000588216 PIK3C2GO75747 1445 aa16.23■□□□□ 0.19
TNPO2-210ENST00000588216 SALL2Q9Y467 1007 aaPredicted RBP16.23■□□□□ 0.19
TNPO2-210ENST00000588216 RALBP1Q15311 655 aa16.23■□□□□ 0.19
TNPO2-210ENST00000588216 MYBBP1AQ9BQG0 1328 aaKnown RBP16.23■□□□□ 0.19
TNPO2-210ENST00000588216 CEBPAP49715 358 aaPredicted RBP16.22■□□□□ 0.19
TNPO2-210ENST00000588216 CDCA8Q53HL2 280 aa16.22■□□□□ 0.19
TNPO2-210ENST00000588216 IQGAP1P46940 1657 aa16.22■□□□□ 0.19
TNPO2-210ENST00000588216 PNISRQ8TF01 805 aaKnown RBP16.21■□□□□ 0.19
TNPO2-210ENST00000588216 NRXN1Q9ULB1 1477 aa16.2■□□□□ 0.18
TNPO2-210ENST00000588216 IFT172Q9UG01 1749 aa16.2■□□□□ 0.18
TNPO2-210ENST00000588216 NEURL4Q96JN8 1562 aa16.2■□□□□ 0.18
TNPO2-210ENST00000588216 ZMYM3Q14202 1370 aa16.2■□□□□ 0.18
TNPO2-210ENST00000588216 CLTCQ00610 1675 aaKnown RBP16.2■□□□□ 0.18
TNPO2-210ENST00000588216 ERVK-7P63135 1459 aa16.19■□□□□ 0.18
TNPO2-210ENST00000588216 PREX1Q8TCU6 1659 aa16.19■□□□□ 0.18
TNPO2-210ENST00000588216 PPLO60437 1756 aa16.19■□□□□ 0.18
TNPO2-210ENST00000588216 SLC12A5Q9H2X9 1139 aa16.18■□□□□ 0.18
TNPO2-210ENST00000588216 ZC3H13Q5T200 1668 aaKnown RBP16.18■□□□□ 0.18
TNPO2-210ENST00000588216 PIK3C2BO00750 1634 aa16.18■□□□□ 0.18
TNPO2-210ENST00000588216 NEXMIFQ5QGS0 1516 aa16.18■□□□□ 0.18
TNPO2-210ENST00000588216 NBR1Q14596 966 aa16.17■□□□□ 0.18
TNPO2-210ENST00000588216 NLRP13Q86W25 1043 aa16.17■□□□□ 0.18
TNPO2-210ENST00000588216 PPP6R1Q9UPN7 881 aa16.17■□□□□ 0.18
TNPO2-210ENST00000588216 MYO5BQ9ULV0 1848 aa16.17■□□□□ 0.18
TNPO2-210ENST00000588216 AGLP35573 1532 aa16.16■□□□□ 0.18
TNPO2-210ENST00000588216 PARD3Q8TEW0 1356 aa16.16■□□□□ 0.18
TNPO2-210ENST00000588216 CABP2Q9NPB3 220 aa16.16■□□□□ 0.18
TNPO2-210ENST00000588216 ARHGEF40Q8TER5 1519 aa16.15■□□□□ 0.18
TNPO2-210ENST00000588216 CARD14Q9BXL6 1004 aa16.15■□□□□ 0.18
TNPO2-210ENST00000588216 KIAA1210Q9ULL0 1709 aa16.15■□□□□ 0.18
TNPO2-210ENST00000588216 AMER1Q5JTC6 1135 aaPredicted RBP16.15■□□□□ 0.18
TNPO2-210ENST00000588216 MINK1Q8N4C8 1332 aaPredicted RBP16.14■□□□□ 0.17
TNPO2-210ENST00000588216 ADGRB1O14514 1584 aa16.14■□□□□ 0.17
TNPO2-210ENST00000588216 PAK3O75914 559 aaPredicted RBP16.14■□□□□ 0.17
TNPO2-210ENST00000588216 PRAM1Q96QH2 718 aa16.14■□□□□ 0.17
TNPO2-210ENST00000588216 POGKQ9P215 609 aa16.14■□□□□ 0.17
TNPO2-210ENST00000588216 TNNT2P45379 298 aaPredicted RBP16.13■□□□□ 0.17
TNPO2-210ENST00000588216 BRD4O60885 1362 aaPredicted RBP16.13■□□□□ 0.17
TNPO2-210ENST00000588216 TMEM131LA2VDJ0 1609 aa16.13■□□□□ 0.17
TNPO2-210ENST00000588216 ZBED9Q6R2W3 1325 aa16.12■□□□□ 0.17
TNPO2-210ENST00000588216 REREQ9P2R6 1566 aa16.12■□□□□ 0.17
TNPO2-210ENST00000588216 SRPK2P78362 688 aaKnown RBP16.11■□□□□ 0.17
TNPO2-210ENST00000588216 RTL5Q5HYW3 569 aaPredicted RBP16.11■□□□□ 0.17
TNPO2-210ENST00000588216 WAPLQ7Z5K2 1190 aa16.11■□□□□ 0.17
TNPO2-210ENST00000588216 PPP2R1AP30153 589 aa16.1■□□□□ 0.17
TNPO2-210ENST00000588216 UBE2Q2Q8WVN8 375 aa16.1■□□□□ 0.17
TNPO2-210ENST00000588216 SLC24A1O60721 1099 aa16.1■□□□□ 0.17
TNPO2-210ENST00000588216 A2ML1A8K2U0 1454 aa16.09■□□□□ 0.17
TNPO2-210ENST00000588216 SETBP1Q9Y6X0 1596 aa16.08■□□□□ 0.17
TNPO2-210ENST00000588216 RIMS2Q9UQ26 1411 aa16.08■□□□□ 0.17
TNPO2-210ENST00000588216 EVC2Q86UK5 1308 aa16.08■□□□□ 0.16
TNPO2-210ENST00000588216 KDM5AP29375 1690 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms