RNA–Protein interactions for RNA: ENST00000587998.5

LINC00906-202, long intergenic non-protein coding RNA 906, humanhuman

TSL 3 BASIC

Gene LINC00906, Length 648 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00906-202ENST00000587998 PREX2Q70Z35 1606 aa11.96□□□□□ -0.5
LINC00906-202ENST00000587998 ATAD2Q6PL18 1390 aa11.95□□□□□ -0.5
LINC00906-202ENST00000587998 HNRNPMP52272 730 aaKnown RBP eCLIP11.95□□□□□ -0.5
LINC00906-202ENST00000587998 ATP1B4Q9UN42 357 aaPredicted RBP11.95□□□□□ -0.5
LINC00906-202ENST00000587998 COL16A1Q07092 1604 aaPredicted RBP11.95□□□□□ -0.5
LINC00906-202ENST00000587998 AFF2P51816 1311 aa11.94□□□□□ -0.5
LINC00906-202ENST00000587998 LTKP29376 864 aa11.94□□□□□ -0.5
LINC00906-202ENST00000587998 MAP3K1Q13233 1512 aa11.94□□□□□ -0.5
LINC00906-202ENST00000587998 KCNA6P17658 529 aa11.93□□□□□ -0.5
LINC00906-202ENST00000587998 QTRT2Q9H974 415 aaKnown RBP11.93□□□□□ -0.5
LINC00906-202ENST00000587998 SCAF11Q99590 1463 aaKnown RBP11.93□□□□□ -0.5
LINC00906-202ENST00000587998 PROSER2Q86WR7 435 aaPredicted RBP11.92□□□□□ -0.5
LINC00906-202ENST00000587998 CCDC125Q86Z20 511 aa11.92□□□□□ -0.5
LINC00906-202ENST00000587998 ZNF579Q8NAF0 562 aaKnown RBP11.92□□□□□ -0.5
LINC00906-202ENST00000587998 ZNF777Q9ULD5 760 aaPredicted RBP11.92□□□□□ -0.5
LINC00906-202ENST00000587998 INO80Q9ULG1 1556 aaPredicted RBP11.92□□□□□ -0.5
LINC00906-202ENST00000587998 TXNDC2Q86VQ3 553 aa11.91□□□□□ -0.5
LINC00906-202ENST00000587998 KIAA1107Q9UPP5 1409 aa11.91□□□□□ -0.5
LINC00906-202ENST00000587998 SYCP2Q9BX26 1530 aa11.91□□□□□ -0.5
LINC00906-202ENST00000587998 WASHC2CQ9Y4E1 1318 aa11.9□□□□□ -0.5
LINC00906-202ENST00000587998 DHX29Q7Z478 1369 aaKnown RBP11.9□□□□□ -0.5
LINC00906-202ENST00000587998 LRP5O75197 1615 aa11.89□□□□□ -0.51
LINC00906-202ENST00000587998 ARHGAP23Q9P227 1491 aa11.89□□□□□ -0.51
LINC00906-202ENST00000587998 FMN1Q68DA7 1419 aa11.88□□□□□ -0.51
LINC00906-202ENST00000587998 KIF3BO15066 747 aa11.88□□□□□ -0.51
LINC00906-202ENST00000587998 CLCN6P51797 869 aa11.88□□□□□ -0.51
LINC00906-202ENST00000587998 NGLY1Q96IV0 654 aa11.88□□□□□ -0.51
LINC00906-202ENST00000587998 MSH6P52701 1360 aa11.88□□□□□ -0.51
LINC00906-202ENST00000587998 SHPRHQ149N8 1683 aa11.87□□□□□ -0.51
LINC00906-202ENST00000587998 PRDM15P57071 1507 aaPredicted RBP11.87□□□□□ -0.51
LINC00906-202ENST00000587998 MNX1P50219 401 aaPredicted RBP11.87□□□□□ -0.51
LINC00906-202ENST00000587998 ADGBQ8N7X0 1667 aa11.87□□□□□ -0.51
LINC00906-202ENST00000587998 GALR2O43603 387 aaPredicted RBP11.86□□□□□ -0.51
LINC00906-202ENST00000587998 YY1P25490 414 aa11.86□□□□□ -0.51
LINC00906-202ENST00000587998 DCBLD2Q96PD2 775 aa11.86□□□□□ -0.51
LINC00906-202ENST00000587998 SLIT1O75093 1534 aa11.86□□□□□ -0.51
LINC00906-202ENST00000587998 NCOA2Q15596 1464 aa11.85□□□□□ -0.51
LINC00906-202ENST00000587998 CDC42BPAQ5VT25 1732 aa11.85□□□□□ -0.51
LINC00906-202ENST00000587998 EID1Q9Y6B2 187 aa11.84□□□□□ -0.51
LINC00906-202ENST00000587998 ABCC3O15438 1527 aa11.84□□□□□ -0.51
LINC00906-202ENST00000587998 TIAM1Q13009 1591 aa11.84□□□□□ -0.51
LINC00906-202ENST00000587998 PLEKHH2Q8IVE3 1493 aa11.83□□□□□ -0.52
LINC00906-202ENST00000587998 AHDC1Q5TGY3 1603 aaPredicted RBP11.83□□□□□ -0.52
LINC00906-202ENST00000587998 RTEL1-TNFRSF6BF6WH68 1400 aa11.83□□□□□ -0.52
LINC00906-202ENST00000587998 GPATCH8Q9UKJ3 1502 aaKnown RBP11.82□□□□□ -0.52
LINC00906-202ENST00000587998 C8orf37Q96NL8 207 aa11.82□□□□□ -0.52
LINC00906-202ENST00000587998 UBR1Q8IWV7 1749 aa11.81□□□□□ -0.52
LINC00906-202ENST00000587998 DIP2AQ14689 1571 aa11.81□□□□□ -0.52
LINC00906-202ENST00000587998 PHF12Q96QT6 1004 aa11.81□□□□□ -0.52
LINC00906-202ENST00000587998 NKTRP30414 1462 aaKnown RBP11.81□□□□□ -0.52
LINC00906-202ENST00000587998 NWD1Q149M9 1564 aa11.8□□□□□ -0.52
LINC00906-202ENST00000587998 PELP1Q8IZL8 1130 aaKnown RBP11.8□□□□□ -0.52
LINC00906-202ENST00000587998 ERVK-7P63135 1459 aa11.8□□□□□ -0.52
LINC00906-202ENST00000587998 CFDP1Q9UEE9 299 aaPredicted RBP11.79□□□□□ -0.52
LINC00906-202ENST00000587998 HRCP23327 699 aa11.78□□□□□ -0.52
LINC00906-202ENST00000587998 SLC26A8Q96RN1 970 aa11.78□□□□□ -0.52
LINC00906-202ENST00000587998 TMEM2Q9UHN6 1383 aa11.78□□□□□ -0.52
LINC00906-202ENST00000587998 NHSL1Q5SYE7 1610 aa11.77□□□□□ -0.53
LINC00906-202ENST00000587998 TET3O43151 1660 aa11.77□□□□□ -0.53
LINC00906-202ENST00000587998 LRRIQ1Q96JM4 1722 aa11.77□□□□□ -0.53
LINC00906-202ENST00000587998 NCOA3Q9Y6Q9 1424 aa11.77□□□□□ -0.53
LINC00906-202ENST00000587998 TRPC5Q9UL62 973 aaPredicted RBP11.76□□□□□ -0.53
LINC00906-202ENST00000587998 SETD5Q9C0A6 1442 aa11.76□□□□□ -0.53
LINC00906-202ENST00000587998 MBD5Q9P267 1494 aa11.76□□□□□ -0.53
LINC00906-202ENST00000587998 KDM5AP29375 1690 aaKnown RBP11.75□□□□□ -0.53
LINC00906-202ENST00000587998 DEFB132Q7Z7B7 95 aa11.75□□□□□ -0.53
LINC00906-202ENST00000587998 CADPS2Q86UW7 1296 aa11.75□□□□□ -0.53
LINC00906-202ENST00000587998 BLMP54132 1417 aaPredicted RBP11.75□□□□□ -0.53
LINC00906-202ENST00000587998 BRINP3Q76B58 766 aa11.74□□□□□ -0.53
LINC00906-202ENST00000587998 PROM2Q8N271 834 aa11.74□□□□□ -0.53
LINC00906-202ENST00000587998 ARHGAP35Q9NRY4 1499 aa11.74□□□□□ -0.53
LINC00906-202ENST00000587998 POTEB2H3BUK9 544 aa11.73□□□□□ -0.53
LINC00906-202ENST00000587998 CAMSAP2Q08AD1 1489 aa11.73□□□□□ -0.53
LINC00906-202ENST00000587998 BCL9LQ86UU0 1499 aa11.73□□□□□ -0.53
LINC00906-202ENST00000587998 LRRC59Q96AG4 307 aaKnown RBP11.73□□□□□ -0.53
LINC00906-202ENST00000587998 EP400Q96L91 3159 aa11.72□□□□□ -0.53
LINC00906-202ENST00000587998 ZNF644Q9H582 1327 aaPredicted RBP11.72□□□□□ -0.53
LINC00906-202ENST00000587998 PSDA5PKW4 1024 aaPredicted RBP11.72□□□□□ -0.53
LINC00906-202ENST00000587998 C19orf44Q9H6X5 657 aa11.72□□□□□ -0.53
LINC00906-202ENST00000587998 USP21Q9UK80 565 aa11.72□□□□□ -0.53
LINC00906-202ENST00000587998 ATRNO75882 1429 aa11.71□□□□□ -0.53
LINC00906-202ENST00000587998 SENP3-EIF4A1A0A087X0R7 540 aa11.71□□□□□ -0.53
LINC00906-202ENST00000587998 FNBP4Q8N3X1 1017 aaPredicted RBP11.71□□□□□ -0.53
LINC00906-202ENST00000587998 CCDC18Q5T9S5 1454 aa11.7□□□□□ -0.54
LINC00906-202ENST00000587998 PAK3O75914 559 aaPredicted RBP11.7□□□□□ -0.54
LINC00906-202ENST00000587998 MAST1Q9Y2H9 1570 aa11.7□□□□□ -0.54
LINC00906-202ENST00000587998 PNPLA6Q8IY17 1366 aa11.69□□□□□ -0.54
LINC00906-202ENST00000587998 ATF3P18847 181 aa11.69□□□□□ -0.54
LINC00906-202ENST00000587998 CCNB3Q8WWL7 1395 aa11.68□□□□□ -0.54
LINC00906-202ENST00000587998 ADAMTS2O95450 1211 aa11.68□□□□□ -0.54
LINC00906-202ENST00000587998 MROH1Q8NDA8 1641 aa11.67□□□□□ -0.54
LINC00906-202ENST00000587998 SF3B2Q13435 895 aaKnown RBP11.66□□□□□ -0.54
LINC00906-202ENST00000587998 C14orf37Q86TY3 774 aa11.66□□□□□ -0.54
LINC00906-202ENST00000587998 CASKIN1Q8WXD9 1431 aa11.66□□□□□ -0.54
LINC00906-202ENST00000587998 OTUD5Q96G74 571 aa11.65□□□□□ -0.54
LINC00906-202ENST00000587998 EEA1Q15075 1411 aa11.65□□□□□ -0.54
LINC00906-202ENST00000587998 CFAP65Q6ZU64 1925 aaKnown RBP11.64□□□□□ -0.55
LINC00906-202ENST00000587998 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.64□□□□□ -0.55
LINC00906-202ENST00000587998 ARHGAP31Q2M1Z3 1444 aa11.64□□□□□ -0.55
LINC00906-202ENST00000587998 RSPH4AQ5TD94 716 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms