RNA–Protein interactions for RNA: ENST00000587760.5

NFIX-209, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-209ENST00000587760 CHGAP10645 457 aaKnown RBP23.49■■□□□ 1.35
NFIX-209ENST00000587760 ESF1Q9H501 851 aaKnown RBP23.49■■□□□ 1.35
NFIX-209ENST00000587760 ERVK-7P63135 1459 aa23.48■■□□□ 1.35
NFIX-209ENST00000587760 PPLO60437 1756 aa23.48■■□□□ 1.35
NFIX-209ENST00000587760 EIF3AQ14152 1382 aaKnown RBP23.48■■□□□ 1.35
NFIX-209ENST00000587760 SCAF11Q99590 1463 aaKnown RBP23.48■■□□□ 1.35
NFIX-209ENST00000587760 CLTCQ00610 1675 aaKnown RBP23.48■■□□□ 1.35
NFIX-209ENST00000587760 TRHP20396 242 aaPredicted RBP23.47■■□□□ 1.35
NFIX-209ENST00000587760 IQGAP1P46940 1657 aa23.46■■□□□ 1.35
NFIX-209ENST00000587760 VGFO15240 615 aaPredicted RBP23.44■■□□□ 1.34
NFIX-209ENST00000587760 SPATA31D1Q6ZQQ2 1576 aa23.44■■□□□ 1.34
NFIX-209ENST00000587760 SETBP1Q9Y6X0 1596 aa23.43■■□□□ 1.34
NFIX-209ENST00000587760 ZFYVE9O95405 1425 aa23.43■■□□□ 1.34
NFIX-209ENST00000587760 IDI1Q13907 227 aa23.43■■□□□ 1.34
NFIX-209ENST00000587760 PIK3C2GO75747 1445 aa23.41■■□□□ 1.34
NFIX-209ENST00000587760 ADGRF5Q8IZF2 1346 aa23.41■■□□□ 1.34
NFIX-209ENST00000587760 TMF1P82094 1093 aa23.4■■□□□ 1.34
NFIX-209ENST00000587760 NEXMIFQ5QGS0 1516 aa23.39■■□□□ 1.34
NFIX-209ENST00000587760 TMEM131LA2VDJ0 1609 aa23.39■■□□□ 1.34
NFIX-209ENST00000587760 MLECQ14165 292 aa23.38■■□□□ 1.33
NFIX-209ENST00000587760 CDCA8Q53HL2 280 aa23.37■■□□□ 1.33
NFIX-209ENST00000587760 TESK2Q96S53 571 aa23.36■■□□□ 1.33
NFIX-209ENST00000587760 ZMYM3Q14202 1370 aa23.36■■□□□ 1.33
NFIX-209ENST00000587760 C14orf93Q9H972 538 aaKnown RBP23.36■■□□□ 1.33
NFIX-209ENST00000587760 CFAP70Q5T0N1 1121 aa23.35■■□□□ 1.33
NFIX-209ENST00000587760 FBXO31Q5XUX0 539 aaPredicted RBP23.34■■□□□ 1.33
NFIX-209ENST00000587760 POLR3GLQ9BT43 218 aa23.34■■□□□ 1.33
NFIX-209ENST00000587760 YTHDC1Q96MU7 727 aaKnown RBP23.33■■□□□ 1.33
NFIX-209ENST00000587760 STAG3Q9UJ98 1225 aa23.32■■□□□ 1.32
NFIX-209ENST00000587760 MYO3AQ8NEV4 1616 aa23.3■■□□□ 1.32
NFIX-209ENST00000587760 SBNO2Q9Y2G9 1366 aa23.29■■□□□ 1.32
NFIX-209ENST00000587760 PRKRIP1Q9H875 184 aaPredicted RBP23.29■■□□□ 1.32
NFIX-209ENST00000587760 KTN1Q86UP2 1357 aaKnown RBP23.28■■□□□ 1.32
NFIX-209ENST00000587760 KDM5AP29375 1690 aaKnown RBP23.27■■□□□ 1.32
NFIX-209ENST00000587760 ADGRB1O14514 1584 aa23.27■■□□□ 1.32
NFIX-209ENST00000587760 MYO5BQ9ULV0 1848 aa23.26■■□□□ 1.31
NFIX-209ENST00000587760 DISP3Q9P2K9 1392 aa23.26■■□□□ 1.31
NFIX-209ENST00000587760 A2ML1A8K2U0 1454 aa23.25■■□□□ 1.31
NFIX-209ENST00000587760 TNRQ92752 1358 aa23.24■■□□□ 1.31
NFIX-209ENST00000587760 HDGFP51858 240 aaKnown RBP23.24■■□□□ 1.31
NFIX-209ENST00000587760 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.24■■□□□ 1.31
NFIX-209ENST00000587760 CENPJQ9HC77 1338 aaPredicted RBP23.21■■□□□ 1.31
NFIX-209ENST00000587760 NLRP1Q9C000 1473 aa23.2■■□□□ 1.3
NFIX-209ENST00000587760 RIMS2Q9UQ26 1411 aa23.19■■□□□ 1.3
NFIX-209ENST00000587760 FER1L4A9Z1Z3 1794 aa23.17■■□□□ 1.3
NFIX-209ENST00000587760 RALBP1Q15311 655 aa23.17■■□□□ 1.3
NFIX-209ENST00000587760 PUS7Q96PZ0 661 aaKnown RBP23.13■■□□□ 1.29
NFIX-209ENST00000587760 TRAK1Q9UPV9 953 aa23.13■■□□□ 1.29
NFIX-209ENST00000587760 QRICH2Q9H0J4 1663 aa23.13■■□□□ 1.29
NFIX-209ENST00000587760 NUTM2DQ5VT03 806 aaPredicted RBP23.12■■□□□ 1.29
NFIX-209ENST00000587760 ALKQ9UM73 1620 aa23.12■■□□□ 1.29
NFIX-209ENST00000587760 C3P01024 1663 aa23.11■■□□□ 1.29
NFIX-209ENST00000587760 TMEM132EQ6IEE7 984 aa23.11■■□□□ 1.29
NFIX-209ENST00000587760 ARHGEF28Q8N1W1 1705 aaKnown RBP23.11■■□□□ 1.29
NFIX-209ENST00000587760 PER1O15534 1290 aaPredicted RBP23.1■■□□□ 1.29
NFIX-209ENST00000587760 UBR1Q8IWV7 1749 aa23.1■■□□□ 1.29
NFIX-209ENST00000587760 PANK3Q9H999 370 aa23.09■■□□□ 1.29
NFIX-209ENST00000587760 MRS2Q9HD23 443 aa23.09■■□□□ 1.29
NFIX-209ENST00000587760 ASXL1Q8IXJ9 1541 aa23.08■■□□□ 1.29
NFIX-209ENST00000587760 YTHDC2Q9H6S0 1430 aaKnown RBP23.08■■□□□ 1.29
NFIX-209ENST00000587760 TMEM2Q9UHN6 1383 aa23.07■■□□□ 1.28
NFIX-209ENST00000587760 MYBBP1AQ9BQG0 1328 aaKnown RBP23.07■■□□□ 1.28
NFIX-209ENST00000587760 MYOM1P52179 1685 aa23.05■■□□□ 1.28
NFIX-209ENST00000587760 EVC2Q86UK5 1308 aa23.05■■□□□ 1.28
NFIX-209ENST00000587760 DLC1Q96QB1 1528 aa23.05■■□□□ 1.28
NFIX-209ENST00000587760 KNSTRNQ9Y448 316 aa23.05■■□□□ 1.28
NFIX-209ENST00000587760 PARD3Q8TEW0 1356 aa23.04■■□□□ 1.28
NFIX-209ENST00000587760 BRD4O60885 1362 aaPredicted RBP23.04■■□□□ 1.28
NFIX-209ENST00000587760 NPC1L1Q9UHC9 1359 aa23.03■■□□□ 1.28
NFIX-209ENST00000587760 LRPPRCP42704 1394 aaKnown RBP23.02■■□□□ 1.28
NFIX-209ENST00000587760 SETD1AO15047 1707 aaKnown RBP23.01■■□□□ 1.27
NFIX-209ENST00000587760 PTPRMP28827 1452 aa23.01■■□□□ 1.27
NFIX-209ENST00000587760 EID1Q9Y6B2 187 aa22.99■■□□□ 1.27
NFIX-209ENST00000587760 ABCC11Q96J66 1382 aa22.99■■□□□ 1.27
NFIX-209ENST00000587760 NINLQ9Y2I6 1382 aa22.99■■□□□ 1.27
NFIX-209ENST00000587760 NLRP13Q86W25 1043 aa22.98■■□□□ 1.27
NFIX-209ENST00000587760 TMC1Q8TDI8 760 aa22.98■■□□□ 1.27
NFIX-209ENST00000587760 SLIT1O75093 1534 aa22.98■■□□□ 1.27
NFIX-209ENST00000587760 NRXN3Q9Y4C0 1643 aa22.98■■□□□ 1.27
NFIX-209ENST00000587760 CEBPAP49715 358 aaPredicted RBP22.98■■□□□ 1.27
NFIX-209ENST00000587760 THEMISQ8N1K5 641 aaPredicted RBP22.98■■□□□ 1.27
NFIX-209ENST00000587760 POGKQ9P215 609 aa22.98■■□□□ 1.27
NFIX-209ENST00000587760 PLEKHG1Q9ULL1 1385 aa22.97■■□□□ 1.27
NFIX-209ENST00000587760 STK26Q9P289 416 aa22.97■■□□□ 1.27
NFIX-209ENST00000587760 SIRT1Q96EB6 747 aa22.96■■□□□ 1.27
NFIX-209ENST00000587760 ARHGAP23Q9P227 1491 aa22.95■■□□□ 1.27
NFIX-209ENST00000587760 ADAMTSL3P82987 1691 aa22.95■■□□□ 1.26
NFIX-209ENST00000587760 CCDC184Q52MB2 194 aa22.94■■□□□ 1.26
NFIX-209ENST00000587760 TULP4Q9NRJ4 1543 aa22.94■■□□□ 1.26
NFIX-209ENST00000587760 RIMS1Q86UR5 1692 aaKnown RBP22.94■■□□□ 1.26
NFIX-209ENST00000587760 KNDC1Q76NI1 1749 aa22.94■■□□□ 1.26
NFIX-209ENST00000587760 PRAM1Q96QH2 718 aa22.93■■□□□ 1.26
NFIX-209ENST00000587760 ATAD2Q6PL18 1390 aa22.92■■□□□ 1.26
NFIX-209ENST00000587760 TECPR2O15040 1411 aa22.92■■□□□ 1.26
NFIX-209ENST00000587760 FAM135BQ49AJ0 1406 aa22.92■■□□□ 1.26
NFIX-209ENST00000587760 AMER1Q5JTC6 1135 aaPredicted RBP22.92■■□□□ 1.26
NFIX-209ENST00000587760 HNRNPUQ00839 825 aaKnown RBP eCLIP22.91■■□□□ 1.26
NFIX-209ENST00000587760 CNGB1Q14028 1251 aaPredicted RBP22.91■■□□□ 1.26
NFIX-209ENST00000587760 FAM9BQ8IZU0 186 aa22.91■■□□□ 1.26
NFIX-209ENST00000587760 BCANQ96GW7 911 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms