RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 UGGT2Q9NYU1 1516 aa17.49■□□□□ 0.39
CACNA1A-209ENST00000587525 TNNQ9UQP3 1299 aa17.49■□□□□ 0.39
CACNA1A-209ENST00000587525 DHX29Q7Z478 1369 aaKnown RBP17.48■□□□□ 0.39
CACNA1A-209ENST00000587525 MYH16Q9H6N6 1097 aa17.48■□□□□ 0.39
CACNA1A-209ENST00000587525 HSP90AB1P08238 724 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-209ENST00000587525 SPINK5Q9NQ38 1064 aaPredicted RBP17.47■□□□□ 0.39
CACNA1A-209ENST00000587525 ARHGAP5Q13017 1502 aa17.47■□□□□ 0.39
CACNA1A-209ENST00000587525 E9PSI1 815 aa17.47■□□□□ 0.39
CACNA1A-209ENST00000587525 FOXD4L5Q5VV16 416 aaPredicted RBP17.47■□□□□ 0.39
CACNA1A-209ENST00000587525 FOXD4L4Q8WXT5 416 aaPredicted RBP17.47■□□□□ 0.39
CACNA1A-209ENST00000587525 ROCK1Q13464 1354 aa17.47■□□□□ 0.39
CACNA1A-209ENST00000587525 NUP153P49790 1475 aaKnown RBP17.46■□□□□ 0.39
CACNA1A-209ENST00000587525 VSIG10Q8N0Z9 540 aa17.46■□□□□ 0.39
CACNA1A-209ENST00000587525 GPATCH8Q9UKJ3 1502 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-209ENST00000587525 NOL8Q76FK4 1167 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-209ENST00000587525 LNPKQ9C0E8 428 aa17.45■□□□□ 0.38
CACNA1A-209ENST00000587525 TRIM44Q96DX7 344 aaPredicted RBP17.44■□□□□ 0.38
CACNA1A-209ENST00000587525 C1orf115Q9H7X2 142 aa17.44■□□□□ 0.38
CACNA1A-209ENST00000587525 RWDD1Q9H446 243 aaPredicted RBP17.44■□□□□ 0.38
CACNA1A-209ENST00000587525 DISP1Q96F81 1524 aa17.44■□□□□ 0.38
CACNA1A-209ENST00000587525 CEP170Q5SW79 1584 aa17.44■□□□□ 0.38
CACNA1A-209ENST00000587525 USP35Q9P2H5 1018 aa17.44■□□□□ 0.38
CACNA1A-209ENST00000587525 ERBINQ96RT1 1412 aa17.43■□□□□ 0.38
CACNA1A-209ENST00000587525 MS4A1P11836 297 aa17.43■□□□□ 0.38
CACNA1A-209ENST00000587525 LMOD2Q6P5Q4 547 aa17.43■□□□□ 0.38
CACNA1A-209ENST00000587525 NUP160Q12769 1436 aa17.43■□□□□ 0.38
CACNA1A-209ENST00000587525 ADGRF5Q8IZF2 1346 aa17.43■□□□□ 0.38
CACNA1A-209ENST00000587525 DMRT2Q9Y5R5 561 aa17.42■□□□□ 0.38
CACNA1A-209ENST00000587525 PLEKHH2Q8IVE3 1493 aa17.42■□□□□ 0.38
CACNA1A-209ENST00000587525 SCAPERQ9BY12 1400 aa17.42■□□□□ 0.38
CACNA1A-209ENST00000587525 RAPGEF3O95398 923 aa17.42■□□□□ 0.38
CACNA1A-209ENST00000587525 FOXD4L6Q3SYB3 417 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-209ENST00000587525 FOXD4L3Q6VB84 417 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-209ENST00000587525 CYB5RLQ6IPT4 315 aa17.42■□□□□ 0.38
CACNA1A-209ENST00000587525 ZNF428Q96B54 188 aa17.41■□□□□ 0.38
CACNA1A-209ENST00000587525 THUMPD2Q9BTF0 503 aaKnown RBP17.41■□□□□ 0.38
CACNA1A-209ENST00000587525 KIAA0556O60303 1618 aa17.41■□□□□ 0.38
CACNA1A-209ENST00000587525 CFAP43Q8NDM7 1665 aa17.41■□□□□ 0.38
CACNA1A-209ENST00000587525 DUSP27Q5VZP5 1158 aa17.41■□□□□ 0.38
CACNA1A-209ENST00000587525 NECTIN2Q92692 538 aa17.41■□□□□ 0.38
CACNA1A-209ENST00000587525 TAOK2Q9UL54 1235 aa17.41■□□□□ 0.38
CACNA1A-209ENST00000587525 SAMD9Q5K651 1589 aa17.41■□□□□ 0.38
CACNA1A-209ENST00000587525 IGHDP01880 384 aa17.4■□□□□ 0.38
CACNA1A-209ENST00000587525 RIPK4P57078 832 aa17.4■□□□□ 0.38
CACNA1A-209ENST00000587525 PNNQ9H307 717 aaKnown RBP17.4■□□□□ 0.38
CACNA1A-209ENST00000587525 ANKRD45Q5TZF3 282 aa17.4■□□□□ 0.38
CACNA1A-209ENST00000587525 SLC4A10Q6U841 1118 aa17.4■□□□□ 0.38
CACNA1A-209ENST00000587525 TESK2Q96S53 571 aa17.4■□□□□ 0.38
CACNA1A-209ENST00000587525 EXOSC9Q06265 439 aaKnown RBP17.39■□□□□ 0.38
CACNA1A-209ENST00000587525 HSCBQ8IWL3 235 aa17.39■□□□□ 0.37
CACNA1A-209ENST00000587525 PER1O15534 1290 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-209ENST00000587525 PDZRN3Q9UPQ7 1066 aa17.38■□□□□ 0.37
CACNA1A-209ENST00000587525 LTV1Q96GA3 475 aaPredicted RBP17.37■□□□□ 0.37
CACNA1A-209ENST00000587525 SLFN5Q08AF3 891 aa17.37■□□□□ 0.37
CACNA1A-209ENST00000587525 EIF3AQ14152 1382 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-209ENST00000587525 PZPP20742 1482 aa17.36■□□□□ 0.37
CACNA1A-209ENST00000587525 ZKSCAN2Q63HK3 967 aa17.36■□□□□ 0.37
CACNA1A-209ENST00000587525 ANP32BQ92688 251 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-209ENST00000587525 WWC1Q8IX03 1113 aa17.35■□□□□ 0.37
CACNA1A-209ENST00000587525 RUNDC1Q96C34 613 aa17.35■□□□□ 0.37
CACNA1A-209ENST00000587525 CGNL1Q0VF96 1302 aa17.35■□□□□ 0.37
CACNA1A-209ENST00000587525 PMFBP1Q8TBY8 1022 aa17.35■□□□□ 0.37
CACNA1A-209ENST00000587525 HDGFL2Q7Z4V5 671 aaPredicted RBP17.35■□□□□ 0.37
CACNA1A-209ENST00000587525 DZIP1LQ8IYY4 767 aaKnown RBP17.35■□□□□ 0.37
CACNA1A-209ENST00000587525 PLEKHH1Q9ULM0 1364 aa17.33■□□□□ 0.37
CACNA1A-209ENST00000587525 SEC24BO95487 1268 aa17.33■□□□□ 0.36
CACNA1A-209ENST00000587525 RAPGEF6Q8TEU7 1601 aa17.33■□□□□ 0.36
CACNA1A-209ENST00000587525 TEX14Q8IWB6 1497 aa17.32■□□□□ 0.36
CACNA1A-209ENST00000587525 PLCB2Q00722 1185 aa17.32■□□□□ 0.36
CACNA1A-209ENST00000587525 ATP10BO94823 1461 aa17.32■□□□□ 0.36
CACNA1A-209ENST00000587525 AMER1Q5JTC6 1135 aaPredicted RBP17.31■□□□□ 0.36
CACNA1A-209ENST00000587525 DENND4BO75064 1496 aaPredicted RBP17.3■□□□□ 0.36
CACNA1A-209ENST00000587525 TERF2IPQ9NYB0 399 aa17.29■□□□□ 0.36
CACNA1A-209ENST00000587525 GOLGA6L3A6NEY3 463 aa17.29■□□□□ 0.36
CACNA1A-209ENST00000587525 NUTM2GQ5VZR2 741 aa17.29■□□□□ 0.36
CACNA1A-209ENST00000587525 PRAM1Q96QH2 718 aa17.29■□□□□ 0.36
CACNA1A-209ENST00000587525 CARD14Q9BXL6 1004 aa17.29■□□□□ 0.36
CACNA1A-209ENST00000587525 EVC2Q86UK5 1308 aa17.28■□□□□ 0.36
CACNA1A-209ENST00000587525 SPATA31E1Q6ZUB1 1445 aa17.28■□□□□ 0.36
CACNA1A-209ENST00000587525 NOB1Q9ULX3 412 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-209ENST00000587525 IPO8O15397 1037 aaKnown RBP17.27■□□□□ 0.36
CACNA1A-209ENST00000587525 RLBP1P12271 317 aa17.27■□□□□ 0.36
CACNA1A-209ENST00000587525 CABP1Q9NZU7 370 aa17.27■□□□□ 0.35
CACNA1A-209ENST00000587525 DIAPH1O60610 1272 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-209ENST00000587525 DCTN1Q14203 1278 aa17.26■□□□□ 0.35
CACNA1A-209ENST00000587525 PRKAR2BP31323 418 aa17.26■□□□□ 0.35
CACNA1A-209ENST00000587525 PCDHB15Q9Y5E8 787 aa17.26■□□□□ 0.35
CACNA1A-209ENST00000587525 HSP90AA2PQ14568 343 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-209ENST00000587525 TCOF1Q13428 1488 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-209ENST00000587525 VGFO15240 615 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-209ENST00000587525 L1TD1Q5T7N2 865 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-209ENST00000587525 C22orf23Q9BZE7 217 aa17.25■□□□□ 0.35
CACNA1A-209ENST00000587525 RSPH6AQ9H0K4 717 aa17.24■□□□□ 0.35
CACNA1A-209ENST00000587525 CHD1O14646 1710 aa17.24■□□□□ 0.35
CACNA1A-209ENST00000587525 WAPLQ7Z5K2 1190 aa17.24■□□□□ 0.35
CACNA1A-209ENST00000587525 CCDC141Q6ZP82 1450 aa17.24■□□□□ 0.35
CACNA1A-209ENST00000587525 NSD3Q9BZ95 1437 aa17.23■□□□□ 0.35
CACNA1A-209ENST00000587525 RARSP54136 660 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-209ENST00000587525 RRS1Q15050 365 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-209ENST00000587525 A0A0G2JS52 829 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms