RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 NEURL4Q96JN8 1562 aa14.56□□□□□ -0.08
APOC1-201ENST00000586638 UGGT1Q9NYU2 1555 aa14.56□□□□□ -0.08
APOC1-201ENST00000586638 SENP3Q9H4L4 574 aaPredicted RBP14.55□□□□□ -0.08
APOC1-201ENST00000586638 MED14O60244 1454 aa14.55□□□□□ -0.08
APOC1-201ENST00000586638 MED1Q15648 1581 aaPredicted RBP14.54□□□□□ -0.08
APOC1-201ENST00000586638 CFAP65Q6ZU64 1925 aaKnown RBP14.54□□□□□ -0.08
APOC1-201ENST00000586638 KIF1BO60333 1816 aa14.52□□□□□ -0.09
APOC1-201ENST00000586638 TXNDC2Q86VQ3 553 aa14.51□□□□□ -0.09
APOC1-201ENST00000586638 POLR1AO95602 1720 aaPredicted RBP14.5□□□□□ -0.09
APOC1-201ENST00000586638 NBPF8Q3BBV2 869 aa14.5□□□□□ -0.09
APOC1-201ENST00000586638 TRPM1Q7Z4N2 1603 aa14.48□□□□□ -0.09
APOC1-201ENST00000586638 SYNMO15061 1565 aa14.48□□□□□ -0.09
APOC1-201ENST00000586638 LRRC7Q96NW7 1537 aa14.48□□□□□ -0.09
APOC1-201ENST00000586638 LTKP29376 864 aa14.48□□□□□ -0.09
APOC1-201ENST00000586638 EID1Q9Y6B2 187 aa14.48□□□□□ -0.09
APOC1-201ENST00000586638 RALGAPBQ86X10 1494 aa14.48□□□□□ -0.09
APOC1-201ENST00000586638 SPATA31E1Q6ZUB1 1445 aa14.48□□□□□ -0.09
APOC1-201ENST00000586638 IFT172Q9UG01 1749 aa14.47□□□□□ -0.09
APOC1-201ENST00000586638 ZNF326Q5BKZ1 582 aaKnown RBP14.47□□□□□ -0.09
APOC1-201ENST00000586638 DIEXFQ68CQ4 756 aaKnown RBP14.47□□□□□ -0.09
APOC1-201ENST00000586638 ERVK-7P63135 1459 aa14.46□□□□□ -0.09
APOC1-201ENST00000586638 ADGRB3O60242 1522 aa14.46□□□□□ -0.1
APOC1-201ENST00000586638 PIK3C2BO00750 1634 aa14.45□□□□□ -0.1
APOC1-201ENST00000586638 STAG3Q9UJ98 1225 aa14.45□□□□□ -0.1
APOC1-201ENST00000586638 PRAG1Q86YV5 1406 aa14.44□□□□□ -0.1
APOC1-201ENST00000586638 HIRIP3Q9BW71 556 aaPredicted RBP14.44□□□□□ -0.1
APOC1-201ENST00000586638 ALKQ9UM73 1620 aa14.44□□□□□ -0.1
APOC1-201ENST00000586638 IQGAP1P46940 1657 aa14.43□□□□□ -0.1
APOC1-201ENST00000586638 ARHGAP31Q2M1Z3 1444 aa14.43□□□□□ -0.1
APOC1-201ENST00000586638 RGL3Q3MIN7 710 aa14.43□□□□□ -0.1
APOC1-201ENST00000586638 DCAF11Q8TEB1 546 aa14.43□□□□□ -0.1
APOC1-201ENST00000586638 KDM2AQ9Y2K7 1162 aa14.43□□□□□ -0.1
APOC1-201ENST00000586638 SCAF11Q99590 1463 aaKnown RBP14.43□□□□□ -0.1
APOC1-201ENST00000586638 NOS1P29475 1434 aa14.42□□□□□ -0.1
APOC1-201ENST00000586638 MYO5BQ9ULV0 1848 aa14.41□□□□□ -0.1
APOC1-201ENST00000586638 HSPA5P11021 654 aaKnown RBP14.41□□□□□ -0.1
APOC1-201ENST00000586638 PPLO60437 1756 aa14.41□□□□□ -0.1
APOC1-201ENST00000586638 LAMC1P11047 1609 aa14.41□□□□□ -0.1
APOC1-201ENST00000586638 RGS17Q9UGC6 210 aaPredicted RBP14.4□□□□□ -0.1
APOC1-201ENST00000586638 IDI1Q13907 227 aa14.39□□□□□ -0.11
APOC1-201ENST00000586638 STRCP1A6NGW2 1772 aa14.38□□□□□ -0.11
APOC1-201ENST00000586638 KCNA6P17658 529 aa14.38□□□□□ -0.11
APOC1-201ENST00000586638 PROSER2Q86WR7 435 aaPredicted RBP14.38□□□□□ -0.11
APOC1-201ENST00000586638 MYOM2P54296 1465 aa14.38□□□□□ -0.11
APOC1-201ENST00000586638 ARHGAP23Q9P227 1491 aa14.38□□□□□ -0.11
APOC1-201ENST00000586638 TMEM2Q9UHN6 1383 aa14.37□□□□□ -0.11
APOC1-201ENST00000586638 EIF4G2P78344 907 aaKnown RBP eCLIP14.37□□□□□ -0.11
APOC1-201ENST00000586638 SLC26A8Q96RN1 970 aa14.37□□□□□ -0.11
APOC1-201ENST00000586638 SLIT1O75093 1534 aa14.36□□□□□ -0.11
APOC1-201ENST00000586638 USP47Q96K76 1375 aa14.36□□□□□ -0.11
APOC1-201ENST00000586638 FAM135BQ49AJ0 1406 aa14.36□□□□□ -0.11
APOC1-201ENST00000586638 ROCK2O75116 1388 aaKnown RBP14.35□□□□□ -0.11
APOC1-201ENST00000586638 KIAA1210Q9ULL0 1709 aa14.35□□□□□ -0.11
APOC1-201ENST00000586638 RBM33Q96EV2 1170 aaKnown RBP14.35□□□□□ -0.11
APOC1-201ENST00000586638 BCANQ96GW7 911 aa14.35□□□□□ -0.11
APOC1-201ENST00000586638 UBR1Q8IWV7 1749 aa14.35□□□□□ -0.11
APOC1-201ENST00000586638 TMEM94Q12767 1356 aa14.34□□□□□ -0.11
APOC1-201ENST00000586638 TMEM131LA2VDJ0 1609 aa14.33□□□□□ -0.11
APOC1-201ENST00000586638 NEXMIFQ5QGS0 1516 aa14.33□□□□□ -0.12
APOC1-201ENST00000586638 CHGAP10645 457 aaKnown RBP14.32□□□□□ -0.12
APOC1-201ENST00000586638 POTEAQ6S8J7 498 aa14.32□□□□□ -0.12
APOC1-201ENST00000586638 SLC52A1Q9NWF4 448 aa14.32□□□□□ -0.12
APOC1-201ENST00000586638 CARD11Q9BXL7 1154 aa14.31□□□□□ -0.12
APOC1-201ENST00000586638 GPRASP1Q5JY77 1395 aa14.31□□□□□ -0.12
APOC1-201ENST00000586638 NRXN1Q9ULB1 1477 aa14.31□□□□□ -0.12
APOC1-201ENST00000586638 HDGFP51858 240 aaKnown RBP14.3□□□□□ -0.12
APOC1-201ENST00000586638 SLAIN2Q9P270 581 aa14.3□□□□□ -0.12
APOC1-201ENST00000586638 NBPF1Q3BBV0 1214 aa14.28□□□□□ -0.12
APOC1-201ENST00000586638 CCDC7Q96M83 1385 aa14.27□□□□□ -0.12
APOC1-201ENST00000586638 WASHC2AQ641Q2 1341 aa14.27□□□□□ -0.12
APOC1-201ENST00000586638 DDX10Q13206 875 aaKnown RBP14.27□□□□□ -0.13
APOC1-201ENST00000586638 ADGRF5Q8IZF2 1346 aa14.26□□□□□ -0.13
APOC1-201ENST00000586638 MIER1Q8N108 512 aa14.26□□□□□ -0.13
APOC1-201ENST00000586638 PIK3C2GO75747 1445 aa14.25□□□□□ -0.13
APOC1-201ENST00000586638 MSH6P52701 1360 aa14.25□□□□□ -0.13
APOC1-201ENST00000586638 C11orf95C9JLR9 678 aaPredicted RBP14.24□□□□□ -0.13
APOC1-201ENST00000586638 XIRP1Q702N8 1843 aaKnown RBP14.24□□□□□ -0.13
APOC1-201ENST00000586638 KIF7Q2M1P5 1343 aa14.23□□□□□ -0.13
APOC1-201ENST00000586638 SETBP1Q9Y6X0 1596 aa14.23□□□□□ -0.13
APOC1-201ENST00000586638 STAC3Q96MF2 364 aa14.23□□□□□ -0.13
APOC1-201ENST00000586638 TBX22Q9Y458 520 aa14.23□□□□□ -0.13
APOC1-201ENST00000586638 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.22□□□□□ -0.13
APOC1-201ENST00000586638 SRCAPQ6ZRS2 3230 aa14.22□□□□□ -0.13
APOC1-201ENST00000586638 JCADQ9P266 1359 aa14.22□□□□□ -0.13
APOC1-201ENST00000586638 RPGRIP1LQ68CZ1 1315 aa14.21□□□□□ -0.13
APOC1-201ENST00000586638 C14orf37Q86TY3 774 aa14.21□□□□□ -0.13
APOC1-201ENST00000586638 ADGRB1O14514 1584 aa14.21□□□□□ -0.14
APOC1-201ENST00000586638 ST20-MTHFSA0A0A6YYL1 179 aa14.2□□□□□ -0.14
APOC1-201ENST00000586638 NUTM2DQ5VT03 806 aaPredicted RBP14.2□□□□□ -0.14
APOC1-201ENST00000586638 PLEKHG1Q9ULL1 1385 aa14.2□□□□□ -0.14
APOC1-201ENST00000586638 ASXL1Q8IXJ9 1541 aa14.2□□□□□ -0.14
APOC1-201ENST00000586638 KDM5AP29375 1690 aaKnown RBP14.2□□□□□ -0.14
APOC1-201ENST00000586638 ROBO1Q9Y6N7 1651 aa14.2□□□□□ -0.14
APOC1-201ENST00000586638 NKTRP30414 1462 aaKnown RBP14.19□□□□□ -0.14
APOC1-201ENST00000586638 CFAP70Q5T0N1 1121 aa14.19□□□□□ -0.14
APOC1-201ENST00000586638 ARHGEF28Q8N1W1 1705 aaKnown RBP14.18□□□□□ -0.14
APOC1-201ENST00000586638 RIMS2Q9UQ26 1411 aa14.18□□□□□ -0.14
APOC1-201ENST00000586638 QRICH2Q9H0J4 1663 aa14.18□□□□□ -0.14
APOC1-201ENST00000586638 C19orf44Q9H6X5 657 aa14.18□□□□□ -0.14
APOC1-201ENST00000586638 ZFYVE9O95405 1425 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms