RNA–Protein interactions for RNA: ENST00000585974.1

ZNF560-202, Transcript of zinc finger protein 560, humanhuman

TSL 3

Gene ZNF560, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-202ENST00000585974 METTL3Q86U44 580 aaKnown RBP10.1□□□□□ -0.79
ZNF560-202ENST00000585974 RGS20O76081 388 aa10.09□□□□□ -0.79
ZNF560-202ENST00000585974 RNF40O75150 1001 aa10.07□□□□□ -0.8
ZNF560-202ENST00000585974 MINK1Q8N4C8 1332 aaPredicted RBP10.06□□□□□ -0.8
ZNF560-202ENST00000585974 FECHP22830 423 aa10.05□□□□□ -0.8
ZNF560-202ENST00000585974 MAP2K5Q13163 448 aa10.05□□□□□ -0.8
ZNF560-202ENST00000585974 FAM161AQ3B820 660 aa10.05□□□□□ -0.8
ZNF560-202ENST00000585974 A0A0G2JS52 829 aa10.04□□□□□ -0.8
ZNF560-202ENST00000585974 IL21Q9HBE4 155 aa10.04□□□□□ -0.8
ZNF560-202ENST00000585974 DAXXQ9UER7 740 aaPredicted RBP10.04□□□□□ -0.8
ZNF560-202ENST00000585974 APLP1P51693 650 aa10.03□□□□□ -0.8
ZNF560-202ENST00000585974 KMT5BQ4FZB7 885 aa10.03□□□□□ -0.8
ZNF560-202ENST00000585974 TJAP1Q5JTD0 557 aa10.03□□□□□ -0.8
ZNF560-202ENST00000585974 LMOD2Q6P5Q4 547 aa10.02□□□□□ -0.81
ZNF560-202ENST00000585974 IRF6O14896 467 aa10.01□□□□□ -0.81
ZNF560-202ENST00000585974 SULF1Q8IWU6 871 aa10□□□□□ -0.81
ZNF560-202ENST00000585974 MTRQ99707 1265 aa10□□□□□ -0.81
ZNF560-202ENST00000585974 ACTN4O43707 911 aaKnown RBP9.99□□□□□ -0.81
ZNF560-202ENST00000585974 SLC24A1O60721 1099 aa9.97□□□□□ -0.81
ZNF560-202ENST00000585974 SLC10A3P09131 477 aa9.97□□□□□ -0.81
ZNF560-202ENST00000585974 PCDHB3Q9Y5E6 796 aa9.97□□□□□ -0.81
ZNF560-202ENST00000585974 CFHP08603 1231 aa9.96□□□□□ -0.82
ZNF560-202ENST00000585974 BARGINQ6ZT62 677 aa9.95□□□□□ -0.82
ZNF560-202ENST00000585974 PHOX2BQ99453 314 aa9.94□□□□□ -0.82
ZNF560-202ENST00000585974 ZPR1O75312 459 aa9.93□□□□□ -0.82
ZNF560-202ENST00000585974 ZMYND10O75800 440 aa9.93□□□□□ -0.82
ZNF560-202ENST00000585974 NR1I2O75469 434 aa9.92□□□□□ -0.82
ZNF560-202ENST00000585974 KRI1Q8N9T8 703 aaKnown RBP9.92□□□□□ -0.82
ZNF560-202ENST00000585974 DDX11L8A8MPP1 907 aa9.91□□□□□ -0.82
ZNF560-202ENST00000585974 GGCXP38435 758 aa9.91□□□□□ -0.82
ZNF560-202ENST00000585974 RDH13Q8NBN7 331 aa9.91□□□□□ -0.82
ZNF560-202ENST00000585974 ZC3H15Q8WU90 426 aaKnown RBP9.91□□□□□ -0.82
ZNF560-202ENST00000585974 CCDC102AQ96A19 550 aa9.91□□□□□ -0.82
ZNF560-202ENST00000585974 TMUB1Q9BVT8 246 aa9.91□□□□□ -0.82
ZNF560-202ENST00000585974 COPS2P61201 443 aa9.9□□□□□ -0.82
ZNF560-202ENST00000585974 ZNF516Q92618 1163 aa9.9□□□□□ -0.82
ZNF560-202ENST00000585974 CLCN1P35523 988 aa9.89□□□□□ -0.83
ZNF560-202ENST00000585974 GCGRP47871 477 aa9.89□□□□□ -0.83
ZNF560-202ENST00000585974 GRIPAP1Q4V328 841 aa9.88□□□□□ -0.83
ZNF560-202ENST00000585974 BLOC1S3Q6QNY0 202 aa9.88□□□□□ -0.83
ZNF560-202ENST00000585974 ATP6V1AP38606 617 aa9.87□□□□□ -0.83
ZNF560-202ENST00000585974 BCANQ96GW7 911 aa9.87□□□□□ -0.83
ZNF560-202ENST00000585974 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.87□□□□□ -0.83
ZNF560-202ENST00000585974 GPCPD1Q9NPB8 672 aa9.86□□□□□ -0.83
ZNF560-202ENST00000585974 CD46P15529 392 aa9.85□□□□□ -0.83
ZNF560-202ENST00000585974 MDM2Q00987 491 aaPredicted RBP9.85□□□□□ -0.83
ZNF560-202ENST00000585974 PPP1R18Q6NYC8 613 aa9.85□□□□□ -0.83
ZNF560-202ENST00000585974 NLRP7Q8WX94 980 aa9.85□□□□□ -0.83
ZNF560-202ENST00000585974 SCUBE3Q8IX30 993 aa9.84□□□□□ -0.83
ZNF560-202ENST00000585974 SALL2Q9Y467 1007 aaPredicted RBP9.84□□□□□ -0.83
ZNF560-202ENST00000585974 USP46P62068 366 aa9.83□□□□□ -0.84
ZNF560-202ENST00000585974 MORN1Q5T089 497 aa9.83□□□□□ -0.84
ZNF560-202ENST00000585974 ADH1BP00325 375 aa9.82□□□□□ -0.84
ZNF560-202ENST00000585974 AMHR2Q16671 573 aa9.82□□□□□ -0.84
ZNF560-202ENST00000585974 NKX2-3Q8TAU0 364 aa9.82□□□□□ -0.84
ZNF560-202ENST00000585974 FUT2Q10981 343 aa9.81□□□□□ -0.84
ZNF560-202ENST00000585974 AK7Q96M32 723 aa9.81□□□□□ -0.84
ZNF560-202ENST00000585974 V9GY48 417 aaPredicted RBP9.81□□□□□ -0.84
ZNF560-202ENST00000585974 FAM217BQ9NTX9 383 aaPredicted RBP9.8□□□□□ -0.84
ZNF560-202ENST00000585974 KDM4AO75164 1064 aa9.79□□□□□ -0.84
ZNF560-202ENST00000585974 Q3C1V9 767 aa9.78□□□□□ -0.84
ZNF560-202ENST00000585974 PUS10Q3MIT2 529 aaKnown RBP9.78□□□□□ -0.84
ZNF560-202ENST00000585974 FMNL1O95466 1100 aaPredicted RBP9.77□□□□□ -0.85
ZNF560-202ENST00000585974 ANKLE1Q8NAG6 615 aa9.77□□□□□ -0.85
ZNF560-202ENST00000585974 SPSB2Q99619 263 aa9.77□□□□□ -0.85
ZNF560-202ENST00000585974 SLC6A16Q9GZN6 736 aa9.76□□□□□ -0.85
ZNF560-202ENST00000585974 SLC27A5Q9Y2P5 690 aa9.76□□□□□ -0.85
ZNF560-202ENST00000585974 SSTR3P32745 418 aaPredicted RBP9.75□□□□□ -0.85
ZNF560-202ENST00000585974 THAP11Q96EK4 314 aa9.75□□□□□ -0.85
ZNF560-202ENST00000585974 IRX2Q9BZI1 471 aaPredicted RBP9.75□□□□□ -0.85
ZNF560-202ENST00000585974 PRKD2Q9BZL6 878 aa9.75□□□□□ -0.85
ZNF560-202ENST00000585974 RNF223E7ERA6 249 aa9.74□□□□□ -0.85
ZNF560-202ENST00000585974 TRIM66O15016 1216 aa9.74□□□□□ -0.85
ZNF560-202ENST00000585974 TLL1O43897 1013 aa9.74□□□□□ -0.85
ZNF560-202ENST00000585974 TTLL12Q14166 644 aaPredicted RBP9.74□□□□□ -0.85
ZNF560-202ENST00000585974 BRICD5Q6PL45 260 aa9.74□□□□□ -0.85
ZNF560-202ENST00000585974 NUTM1Q86Y26 1132 aa9.74□□□□□ -0.85
ZNF560-202ENST00000585974 LAPTM4AQ15012 233 aa9.73□□□□□ -0.85
ZNF560-202ENST00000585974 S1PR4O95977 384 aa9.72□□□□□ -0.85
ZNF560-202ENST00000585974 DIXDC1Q155Q3 683 aa9.72□□□□□ -0.85
ZNF560-202ENST00000585974 MSS51Q4VC12 460 aa9.71□□□□□ -0.86
ZNF560-202ENST00000585974 REPIN1Q9BWE0 567 aaKnown RBP9.71□□□□□ -0.86
ZNF560-202ENST00000585974 HOXA2O43364 376 aa9.7□□□□□ -0.86
ZNF560-202ENST00000585974 GIGYF2Q6Y7W6 1299 aaKnown RBP9.7□□□□□ -0.86
ZNF560-202ENST00000585974 SLC19A1P41440 591 aa9.69□□□□□ -0.86
ZNF560-202ENST00000585974 GJA5P36382 358 aa9.67□□□□□ -0.86
ZNF560-202ENST00000585974 PARP9Q8IXQ6 854 aa9.67□□□□□ -0.86
ZNF560-202ENST00000585974 FAM160A2Q8N612 972 aaPredicted RBP9.67□□□□□ -0.86
ZNF560-202ENST00000585974 USB1Q9BQ65 265 aaKnown RBP9.66□□□□□ -0.86
ZNF560-202ENST00000585974 PDE4DQ08499 809 aa9.65□□□□□ -0.86
ZNF560-202ENST00000585974 SPIRE2Q8WWL2 714 aa9.65□□□□□ -0.86
ZNF560-202ENST00000585974 BEGAINQ9BUH8 593 aa9.65□□□□□ -0.86
ZNF560-202ENST00000585974 SLC24A3Q9HC58 644 aa9.65□□□□□ -0.86
ZNF560-202ENST00000585974 RPIAP49247 311 aa9.64□□□□□ -0.87
ZNF560-202ENST00000585974 MMP16P51512 607 aa9.64□□□□□ -0.87
ZNF560-202ENST00000585974 RNF19BQ6ZMZ0 732 aa9.64□□□□□ -0.87
ZNF560-202ENST00000585974 PPEF1O14829 653 aaPredicted RBP9.63□□□□□ -0.87
ZNF560-202ENST00000585974 SPRYD7Q5W111 196 aa9.63□□□□□ -0.87
ZNF560-202ENST00000585974 ZNF598Q86UK7 904 aaKnown RBP9.63□□□□□ -0.87
ZNF560-202ENST00000585974 FDX1P10109 184 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms