RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 CFAP65Q6ZU64 1925 aaKnown RBP16.31■□□□□ 0.2
SMARCA4-208ENST00000585799 NOS1P29475 1434 aa16.31■□□□□ 0.2
SMARCA4-208ENST00000585799 C14orf37Q86TY3 774 aa16.3■□□□□ 0.2
SMARCA4-208ENST00000585799 EVC2Q86UK5 1308 aa16.3■□□□□ 0.2
SMARCA4-208ENST00000585799 MYO5CQ9NQX4 1742 aa16.3■□□□□ 0.2
SMARCA4-208ENST00000585799 PLA2R1Q13018 1463 aa16.3■□□□□ 0.2
SMARCA4-208ENST00000585799 GGNBP2Q9H3C7 697 aa16.3■□□□□ 0.2
SMARCA4-208ENST00000585799 GOLGA2Q08379 1002 aa16.29■□□□□ 0.2
SMARCA4-208ENST00000585799 UHRF1BP1Q6BDS2 1440 aa16.28■□□□□ 0.2
SMARCA4-208ENST00000585799 CDC42BPBQ9Y5S2 1711 aa16.28■□□□□ 0.2
SMARCA4-208ENST00000585799 PRAM1Q96QH2 718 aa16.28■□□□□ 0.2
SMARCA4-208ENST00000585799 ZBTB7CA1YPR0 619 aa16.28■□□□□ 0.2
SMARCA4-208ENST00000585799 ANP32AP39687 249 aaKnown RBP16.27■□□□□ 0.2
SMARCA4-208ENST00000585799 HDGFL2Q7Z4V5 671 aaPredicted RBP16.27■□□□□ 0.2
SMARCA4-208ENST00000585799 UHRF1BP1LA0JNW5 1464 aa16.27■□□□□ 0.19
SMARCA4-208ENST00000585799 MAPK8IP3Q9UPT6 1336 aa16.27■□□□□ 0.19
SMARCA4-208ENST00000585799 RRP1P56182 461 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-208ENST00000585799 RTEL1-TNFRSF6BF6WH68 1400 aa16.25■□□□□ 0.19
SMARCA4-208ENST00000585799 ZNF518AQ6AHZ1 1483 aa16.25■□□□□ 0.19
SMARCA4-208ENST00000585799 ATP7AQ04656 1500 aa16.25■□□□□ 0.19
SMARCA4-208ENST00000585799 RGS3P49796 1198 aa16.25■□□□□ 0.19
SMARCA4-208ENST00000585799 PER1O15534 1290 aaPredicted RBP16.25■□□□□ 0.19
SMARCA4-208ENST00000585799 MTHFSP49914 203 aa16.24■□□□□ 0.19
SMARCA4-208ENST00000585799 PDE3BQ13370 1112 aa16.24■□□□□ 0.19
SMARCA4-208ENST00000585799 TERF2IPQ9NYB0 399 aa16.24■□□□□ 0.19
SMARCA4-208ENST00000585799 BCL2L13Q9BXK5 485 aa16.24■□□□□ 0.19
SMARCA4-208ENST00000585799 CGNL1Q0VF96 1302 aa16.24■□□□□ 0.19
SMARCA4-208ENST00000585799 SLC52A1Q9NWF4 448 aa16.23■□□□□ 0.19
SMARCA4-208ENST00000585799 ERICH6BQ5W0A0 696 aa16.23■□□□□ 0.19
SMARCA4-208ENST00000585799 ABCC1P33527 1531 aa16.23■□□□□ 0.19
SMARCA4-208ENST00000585799 SCAF11Q99590 1463 aaKnown RBP16.21■□□□□ 0.19
SMARCA4-208ENST00000585799 CRBNQ96SW2 442 aa16.21■□□□□ 0.19
SMARCA4-208ENST00000585799 HDGFP51858 240 aaKnown RBP16.21■□□□□ 0.19
SMARCA4-208ENST00000585799 WAPLQ7Z5K2 1190 aa16.21■□□□□ 0.19
SMARCA4-208ENST00000585799 TXNDC2Q86VQ3 553 aa16.21■□□□□ 0.19
SMARCA4-208ENST00000585799 CLUAP1Q96AJ1 413 aa16.2■□□□□ 0.18
SMARCA4-208ENST00000585799 CLASP1Q7Z460 1538 aa16.2■□□□□ 0.18
SMARCA4-208ENST00000585799 UGGT1Q9NYU2 1555 aa16.2■□□□□ 0.18
SMARCA4-208ENST00000585799 MAST1Q9Y2H9 1570 aa16.2■□□□□ 0.18
SMARCA4-208ENST00000585799 C14orf93Q9H972 538 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-208ENST00000585799 CEBPAP49715 358 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-208ENST00000585799 CROCC2H7BZ55 1655 aa16.18■□□□□ 0.18
SMARCA4-208ENST00000585799 AMER1Q5JTC6 1135 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-208ENST00000585799 ATP10AO60312 1499 aa16.18■□□□□ 0.18
SMARCA4-208ENST00000585799 CABP1Q9NZU7 370 aa16.17■□□□□ 0.18
SMARCA4-208ENST00000585799 LMOD2Q6P5Q4 547 aa16.16■□□□□ 0.18
SMARCA4-208ENST00000585799 DNAJC5Q9H3Z4 198 aa16.16■□□□□ 0.18
SMARCA4-208ENST00000585799 NBR1Q14596 966 aa16.16■□□□□ 0.18
SMARCA4-208ENST00000585799 RPGRIP1LQ68CZ1 1315 aa16.16■□□□□ 0.18
SMARCA4-208ENST00000585799 NSD3Q9BZ95 1437 aa16.16■□□□□ 0.18
SMARCA4-208ENST00000585799 SLC26A8Q96RN1 970 aa16.15■□□□□ 0.18
SMARCA4-208ENST00000585799 CDK19Q9BWU1 502 aa16.15■□□□□ 0.18
SMARCA4-208ENST00000585799 CARD14Q9BXL6 1004 aa16.15■□□□□ 0.18
SMARCA4-208ENST00000585799 SMG6Q86US8 1419 aaKnown RBP16.15■□□□□ 0.18
SMARCA4-208ENST00000585799 SHROOM2Q13796 1616 aa16.14■□□□□ 0.18
SMARCA4-208ENST00000585799 YEATS2Q9ULM3 1422 aa16.14■□□□□ 0.17
SMARCA4-208ENST00000585799 FTSJ3Q8IY81 847 aaKnown RBP16.14■□□□□ 0.17
SMARCA4-208ENST00000585799 KDM5CP41229 1560 aa16.14■□□□□ 0.17
SMARCA4-208ENST00000585799 FBLN1P23142 703 aa16.13■□□□□ 0.17
SMARCA4-208ENST00000585799 TCP11L2Q8N4U5 519 aa16.13■□□□□ 0.17
SMARCA4-208ENST00000585799 BCORL1Q5H9F3 1711 aa16.13■□□□□ 0.17
SMARCA4-208ENST00000585799 PARD3Q8TEW0 1356 aa16.13■□□□□ 0.17
SMARCA4-208ENST00000585799 GPRASP1Q5JY77 1395 aa16.13■□□□□ 0.17
SMARCA4-208ENST00000585799 EID1Q9Y6B2 187 aa16.13■□□□□ 0.17
SMARCA4-208ENST00000585799 POGZQ7Z3K3 1410 aa16.12■□□□□ 0.17
SMARCA4-208ENST00000585799 KDM5DQ9BY66 1539 aa16.12■□□□□ 0.17
SMARCA4-208ENST00000585799 COL17A1Q9UMD9 1497 aaPredicted RBP16.12■□□□□ 0.17
SMARCA4-208ENST00000585799 NPATQ14207 1427 aa16.11■□□□□ 0.17
SMARCA4-208ENST00000585799 ZFYVE16Q7Z3T8 1539 aa16.11■□□□□ 0.17
SMARCA4-208ENST00000585799 ZBTB47Q9UFB7 747 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-208ENST00000585799 ELL2O00472 640 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-208ENST00000585799 PAK3O75914 559 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-208ENST00000585799 HMOX1P09601 288 aa16.11■□□□□ 0.17
SMARCA4-208ENST00000585799 SKAP1Q86WV1 359 aa16.11■□□□□ 0.17
SMARCA4-208ENST00000585799 RTL5Q5HYW3 569 aaPredicted RBP16.1■□□□□ 0.17
SMARCA4-208ENST00000585799 BCAR3O75815 825 aa16.09■□□□□ 0.17
SMARCA4-208ENST00000585799 COG6Q9Y2V7 657 aa16.09■□□□□ 0.17
SMARCA4-208ENST00000585799 E9PSI1 815 aa16.09■□□□□ 0.17
SMARCA4-208ENST00000585799 C20orf194Q5TEA3 1177 aa16.08■□□□□ 0.17
SMARCA4-208ENST00000585799 RUNDC1Q96C34 613 aa16.08■□□□□ 0.17
SMARCA4-208ENST00000585799 NGDNQ8NEJ9 315 aaKnown RBP16.08■□□□□ 0.16
SMARCA4-208ENST00000585799 TCERG1O14776 1098 aaKnown RBP16.08■□□□□ 0.16
SMARCA4-208ENST00000585799 DIAPH1O60610 1272 aaKnown RBP16.06■□□□□ 0.16
SMARCA4-208ENST00000585799 PLXNC1O60486 1568 aa16.05■□□□□ 0.16
SMARCA4-208ENST00000585799 PANK1Q8TE04 598 aa16.05■□□□□ 0.16
SMARCA4-208ENST00000585799 SMC4Q9NTJ3 1288 aa16.05■□□□□ 0.16
SMARCA4-208ENST00000585799 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.05■□□□□ 0.16
SMARCA4-208ENST00000585799 PMFBP1Q8TBY8 1022 aa16.05■□□□□ 0.16
SMARCA4-208ENST00000585799 COG3Q96JB2 828 aa16.04■□□□□ 0.16
SMARCA4-208ENST00000585799 MYH16Q9H6N6 1097 aa16.04■□□□□ 0.16
SMARCA4-208ENST00000585799 RIPK4P57078 832 aa16.04■□□□□ 0.16
SMARCA4-208ENST00000585799 NUTM2GQ5VZR2 741 aa16.04■□□□□ 0.16
SMARCA4-208ENST00000585799 LTV1Q96GA3 475 aaPredicted RBP16.04■□□□□ 0.16
SMARCA4-208ENST00000585799 PRDM15P57071 1507 aaPredicted RBP16.04■□□□□ 0.16
SMARCA4-208ENST00000585799 TSR2Q969E8 191 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-208ENST00000585799 ANP32EQ9BTT0 268 aa16.03■□□□□ 0.16
SMARCA4-208ENST00000585799 EIF2AK4Q9P2K8 1649 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-208ENST00000585799 IQGAP3Q86VI3 1631 aa16.03■□□□□ 0.16
SMARCA4-208ENST00000585799 MAGI2Q86UL8 1455 aa16.02■□□□□ 0.16
SMARCA4-208ENST00000585799 RBM33Q96EV2 1170 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms