RNA–Protein interactions for RNA: ENST00000585229.1

SMCHD1-212, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-212ENST00000585229 PRKAR2AP13861 404 aaKnown RBP14.43□□□□□ -0.1
SMCHD1-212ENST00000585229 NPATQ14207 1427 aa14.42□□□□□ -0.1
SMCHD1-212ENST00000585229 MIER1Q8N108 512 aa14.42□□□□□ -0.1
SMCHD1-212ENST00000585229 FER1L4A9Z1Z3 1794 aa14.42□□□□□ -0.1
SMCHD1-212ENST00000585229 ZEB1P37275 1124 aaPredicted RBP14.41□□□□□ -0.1
SMCHD1-212ENST00000585229 CNTLNQ9NXG0 1405 aa14.41□□□□□ -0.1
SMCHD1-212ENST00000585229 WASHC2CQ9Y4E1 1318 aa14.41□□□□□ -0.1
SMCHD1-212ENST00000585229 ADAMTSL3P82987 1691 aa14.4□□□□□ -0.1
SMCHD1-212ENST00000585229 PREX1Q8TCU6 1659 aa14.4□□□□□ -0.1
SMCHD1-212ENST00000585229 MNX1P50219 401 aaPredicted RBP14.4□□□□□ -0.1
SMCHD1-212ENST00000585229 NOS1P29475 1434 aa14.4□□□□□ -0.1
SMCHD1-212ENST00000585229 NEURL4Q96JN8 1562 aa14.39□□□□□ -0.11
SMCHD1-212ENST00000585229 IFNLR1Q8IU57 520 aaPredicted RBP14.39□□□□□ -0.11
SMCHD1-212ENST00000585229 PLCD3Q8N3E9 789 aa14.39□□□□□ -0.11
SMCHD1-212ENST00000585229 PIK3C2BO00750 1634 aa14.38□□□□□ -0.11
SMCHD1-212ENST00000585229 SYNMO15061 1565 aa14.38□□□□□ -0.11
SMCHD1-212ENST00000585229 SPATA31D1Q6ZQQ2 1576 aa14.38□□□□□ -0.11
SMCHD1-212ENST00000585229 CLTCL1P53675 1640 aa14.37□□□□□ -0.11
SMCHD1-212ENST00000585229 SIN3AQ96ST3 1273 aa14.36□□□□□ -0.11
SMCHD1-212ENST00000585229 TIMELESSQ9UNS1 1208 aa14.36□□□□□ -0.11
SMCHD1-212ENST00000585229 ERVK-7P63135 1459 aa14.36□□□□□ -0.11
SMCHD1-212ENST00000585229 ARID4BQ4LE39 1312 aaPredicted RBP14.36□□□□□ -0.11
SMCHD1-212ENST00000585229 CFAP65Q6ZU64 1925 aaKnown RBP14.35□□□□□ -0.11
SMCHD1-212ENST00000585229 CCDC144AA2RUR9 1427 aa14.35□□□□□ -0.11
SMCHD1-212ENST00000585229 MADDQ8WXG6 1647 aa14.35□□□□□ -0.11
SMCHD1-212ENST00000585229 C3P01024 1663 aa14.34□□□□□ -0.11
SMCHD1-212ENST00000585229 MLECQ14165 292 aa14.33□□□□□ -0.12
SMCHD1-212ENST00000585229 KIF1BO60333 1816 aa14.33□□□□□ -0.12
SMCHD1-212ENST00000585229 RIMS1Q86UR5 1692 aaKnown RBP14.32□□□□□ -0.12
SMCHD1-212ENST00000585229 ZMYM3Q14202 1370 aa14.32□□□□□ -0.12
SMCHD1-212ENST00000585229 SPATA31E1Q6ZUB1 1445 aa14.32□□□□□ -0.12
SMCHD1-212ENST00000585229 UGGT1Q9NYU2 1555 aa14.31□□□□□ -0.12
SMCHD1-212ENST00000585229 ADGRB3O60242 1522 aa14.31□□□□□ -0.12
SMCHD1-212ENST00000585229 FARP1Q9Y4F1 1045 aaPredicted RBP14.3□□□□□ -0.12
SMCHD1-212ENST00000585229 TONSLQ96HA7 1378 aa14.29□□□□□ -0.12
SMCHD1-212ENST00000585229 KDM5AP29375 1690 aaKnown RBP14.29□□□□□ -0.12
SMCHD1-212ENST00000585229 IFT172Q9UG01 1749 aa14.29□□□□□ -0.12
SMCHD1-212ENST00000585229 NEUROD1Q13562 356 aa14.28□□□□□ -0.12
SMCHD1-212ENST00000585229 ESF1Q9H501 851 aaKnown RBP14.28□□□□□ -0.12
SMCHD1-212ENST00000585229 POTEHQ6S545 545 aa14.27□□□□□ -0.13
SMCHD1-212ENST00000585229 TMEM131LA2VDJ0 1609 aa14.26□□□□□ -0.13
SMCHD1-212ENST00000585229 SLC52A1Q9NWF4 448 aa14.26□□□□□ -0.13
SMCHD1-212ENST00000585229 AMER1Q5JTC6 1135 aaPredicted RBP14.25□□□□□ -0.13
SMCHD1-212ENST00000585229 RTN4Q9NQC3 1192 aaKnown RBP14.25□□□□□ -0.13
SMCHD1-212ENST00000585229 MYO5BQ9ULV0 1848 aa14.25□□□□□ -0.13
SMCHD1-212ENST00000585229 PLEKHG5O94827 1062 aa14.24□□□□□ -0.13
SMCHD1-212ENST00000585229 FBXO31Q5XUX0 539 aaPredicted RBP14.24□□□□□ -0.13
SMCHD1-212ENST00000585229 PPLO60437 1756 aa14.24□□□□□ -0.13
SMCHD1-212ENST00000585229 UHRF1BP1Q6BDS2 1440 aa14.24□□□□□ -0.13
SMCHD1-212ENST00000585229 TNRQ92752 1358 aa14.23□□□□□ -0.13
SMCHD1-212ENST00000585229 L3MBTL2Q969R5 705 aa14.23□□□□□ -0.13
SMCHD1-212ENST00000585229 NLRP1Q9C000 1473 aa14.23□□□□□ -0.13
SMCHD1-212ENST00000585229 MYO3AQ8NEV4 1616 aa14.23□□□□□ -0.13
SMCHD1-212ENST00000585229 PPP1R15AO75807 674 aaPredicted RBP14.22□□□□□ -0.13
SMCHD1-212ENST00000585229 ZNF142P52746 1687 aaPredicted RBP14.21□□□□□ -0.13
SMCHD1-212ENST00000585229 MYOM2P54296 1465 aa14.21□□□□□ -0.13
SMCHD1-212ENST00000585229 KLHL34Q8N239 644 aa14.21□□□□□ -0.13
SMCHD1-212ENST00000585229 UBR1Q8IWV7 1749 aa14.21□□□□□ -0.14
SMCHD1-212ENST00000585229 SETD1BQ9UPS6 1966 aaKnown RBP14.2□□□□□ -0.14
SMCHD1-212ENST00000585229 PTPRMP28827 1452 aa14.2□□□□□ -0.14
SMCHD1-212ENST00000585229 IDI1Q13907 227 aa14.2□□□□□ -0.14
SMCHD1-212ENST00000585229 NEXMIFQ5QGS0 1516 aa14.2□□□□□ -0.14
SMCHD1-212ENST00000585229 STAC3Q96MF2 364 aa14.19□□□□□ -0.14
SMCHD1-212ENST00000585229 A2ML1A8K2U0 1454 aa14.18□□□□□ -0.14
SMCHD1-212ENST00000585229 NRXN1Q9ULB1 1477 aa14.18□□□□□ -0.14
SMCHD1-212ENST00000585229 ZBTB47Q9UFB7 747 aaPredicted RBP14.18□□□□□ -0.14
SMCHD1-212ENST00000585229 RPGRIP1LQ68CZ1 1315 aa14.17□□□□□ -0.14
SMCHD1-212ENST00000585229 PRAG1Q86YV5 1406 aa14.17□□□□□ -0.14
SMCHD1-212ENST00000585229 NUBP1P53384 320 aa14.17□□□□□ -0.14
SMCHD1-212ENST00000585229 KIAA1210Q9ULL0 1709 aa14.17□□□□□ -0.14
SMCHD1-212ENST00000585229 TRPM1Q7Z4N2 1603 aa14.16□□□□□ -0.14
SMCHD1-212ENST00000585229 CEBPAP49715 358 aaPredicted RBP14.16□□□□□ -0.14
SMCHD1-212ENST00000585229 ZFYVE9O95405 1425 aa14.15□□□□□ -0.14
SMCHD1-212ENST00000585229 CEP170BQ9Y4F5 1589 aaPredicted RBP14.15□□□□□ -0.14
SMCHD1-212ENST00000585229 RALGAPBQ86X10 1494 aa14.14□□□□□ -0.15
SMCHD1-212ENST00000585229 LAMC1P11047 1609 aa14.14□□□□□ -0.15
SMCHD1-212ENST00000585229 NBPF8Q3BBV2 869 aa14.13□□□□□ -0.15
SMCHD1-212ENST00000585229 RGL3Q3MIN7 710 aa14.13□□□□□ -0.15
SMCHD1-212ENST00000585229 SPOCK2Q92563 424 aa14.13□□□□□ -0.15
SMCHD1-212ENST00000585229 SLIT1O75093 1534 aa14.13□□□□□ -0.15
SMCHD1-212ENST00000585229 ARHGAP23Q9P227 1491 aa14.12□□□□□ -0.15
SMCHD1-212ENST00000585229 RASEFQ8IZ41 740 aa14.12□□□□□ -0.15
SMCHD1-212ENST00000585229 DCAF11Q8TEB1 546 aa14.12□□□□□ -0.15
SMCHD1-212ENST00000585229 PIK3C2GO75747 1445 aa14.11□□□□□ -0.15
SMCHD1-212ENST00000585229 GPRASP1Q5JY77 1395 aa14.1□□□□□ -0.15
SMCHD1-212ENST00000585229 KDM4FA0A1W2PPD8 638 aa14.1□□□□□ -0.15
SMCHD1-212ENST00000585229 CHGAP10645 457 aaKnown RBP14.1□□□□□ -0.15
SMCHD1-212ENST00000585229 RIMS2Q9UQ26 1411 aa14.09□□□□□ -0.15
SMCHD1-212ENST00000585229 TMEM2Q9UHN6 1383 aa14.09□□□□□ -0.15
SMCHD1-212ENST00000585229 SETBP1Q9Y6X0 1596 aa14.08□□□□□ -0.16
SMCHD1-212ENST00000585229 SETD1AO15047 1707 aaKnown RBP14.07□□□□□ -0.16
SMCHD1-212ENST00000585229 C19orf67A6NJJ6 358 aa14.07□□□□□ -0.16
SMCHD1-212ENST00000585229 ZNF326Q5BKZ1 582 aaKnown RBP14.07□□□□□ -0.16
SMCHD1-212ENST00000585229 KDM2AQ9Y2K7 1162 aa14.07□□□□□ -0.16
SMCHD1-212ENST00000585229 ADGRF5Q8IZF2 1346 aa14.07□□□□□ -0.16
SMCHD1-212ENST00000585229 NRXN3Q9Y4C0 1643 aa14.07□□□□□ -0.16
SMCHD1-212ENST00000585229 VGFO15240 615 aaPredicted RBP14.06□□□□□ -0.16
SMCHD1-212ENST00000585229 IQGAP1P46940 1657 aa14.05□□□□□ -0.16
SMCHD1-212ENST00000585229 ADGRB1O14514 1584 aa14.05□□□□□ -0.16
SMCHD1-212ENST00000585229 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms