RNA–Protein interactions for RNA: ENST00000583821.1

MSI2-218, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-218ENST00000583821 PIP4K2BP78356 416 aa12.68□□□□□ -0.38
MSI2-218ENST00000583821 CHIC2Q9UKJ5 165 aa12.68□□□□□ -0.38
MSI2-218ENST00000583821 ARHGAP31Q2M1Z3 1444 aa12.68□□□□□ -0.38
MSI2-218ENST00000583821 MED1Q15648 1581 aaPredicted RBP12.68□□□□□ -0.38
MSI2-218ENST00000583821 EFCAB6Q5THR3 1501 aa12.67□□□□□ -0.38
MSI2-218ENST00000583821 LRRC7Q96NW7 1537 aa12.67□□□□□ -0.38
MSI2-218ENST00000583821 ARHGAP23Q9P227 1491 aa12.67□□□□□ -0.38
MSI2-218ENST00000583821 LMTK2Q8IWU2 1503 aa12.67□□□□□ -0.38
MSI2-218ENST00000583821 HSPA1LP34931 641 aa12.66□□□□□ -0.38
MSI2-218ENST00000583821 KDM5AP29375 1690 aaKnown RBP12.66□□□□□ -0.38
MSI2-218ENST00000583821 ADGRL2O95490 1459 aa12.65□□□□□ -0.38
MSI2-218ENST00000583821 GCC2Q8IWJ2 1684 aa12.64□□□□□ -0.39
MSI2-218ENST00000583821 LTKP29376 864 aa12.64□□□□□ -0.39
MSI2-218ENST00000583821 RBM42Q9BTD8 480 aaKnown RBP12.64□□□□□ -0.39
MSI2-218ENST00000583821 ANKRD30AQ9BXX3 1397 aa12.64□□□□□ -0.39
MSI2-218ENST00000583821 ADGRB3O60242 1522 aa12.63□□□□□ -0.39
MSI2-218ENST00000583821 KANK1Q14678 1352 aa12.63□□□□□ -0.39
MSI2-218ENST00000583821 TET3O43151 1660 aa12.62□□□□□ -0.39
MSI2-218ENST00000583821 SOCS7O14512 581 aa12.62□□□□□ -0.39
MSI2-218ENST00000583821 ZNF692Q9BU19 519 aaPredicted RBP12.62□□□□□ -0.39
MSI2-218ENST00000583821 UNC13BO14795 1591 aa12.61□□□□□ -0.39
MSI2-218ENST00000583821 TOM1O60784 492 aa12.61□□□□□ -0.39
MSI2-218ENST00000583821 SPDYE2BA6NHP3 402 aa12.6□□□□□ -0.39
MSI2-218ENST00000583821 SPDYE6P0CI01 402 aa12.6□□□□□ -0.39
MSI2-218ENST00000583821 FAM50AQ14320 339 aaKnown RBP12.6□□□□□ -0.39
MSI2-218ENST00000583821 SPDYE2Q495Y8 402 aa12.6□□□□□ -0.39
MSI2-218ENST00000583821 NOS1P29475 1434 aa12.6□□□□□ -0.39
MSI2-218ENST00000583821 TMEM2Q9UHN6 1383 aa12.59□□□□□ -0.39
MSI2-218ENST00000583821 E9PCH4 1651 aa12.59□□□□□ -0.39
MSI2-218ENST00000583821 TXNDC2Q86VQ3 553 aa12.59□□□□□ -0.39
MSI2-218ENST00000583821 ANKRD50Q9ULJ7 1429 aa12.57□□□□□ -0.4
MSI2-218ENST00000583821 SPDYE4A6NLX3 237 aa12.57□□□□□ -0.4
MSI2-218ENST00000583821 TMEM131LA2VDJ0 1609 aa12.57□□□□□ -0.4
MSI2-218ENST00000583821 NWD1Q149M9 1564 aa12.56□□□□□ -0.4
MSI2-218ENST00000583821 IQGAP3Q86VI3 1631 aa12.56□□□□□ -0.4
MSI2-218ENST00000583821 IDI1Q13907 227 aa12.56□□□□□ -0.4
MSI2-218ENST00000583821 STAG3Q9UJ98 1225 aa12.55□□□□□ -0.4
MSI2-218ENST00000583821 EID1Q9Y6B2 187 aa12.55□□□□□ -0.4
MSI2-218ENST00000583821 CHD2O14647 1828 aaKnown RBP12.55□□□□□ -0.4
MSI2-218ENST00000583821 ROBO1Q9Y6N7 1651 aa12.54□□□□□ -0.4
MSI2-218ENST00000583821 RPRD2Q5VT52 1461 aaKnown RBP12.54□□□□□ -0.4
MSI2-218ENST00000583821 SSUH2Q9Y2M2 353 aa12.54□□□□□ -0.4
MSI2-218ENST00000583821 AKT1S1Q96B36 256 aa12.53□□□□□ -0.4
MSI2-218ENST00000583821 ZFYVE9O95405 1425 aa12.53□□□□□ -0.4
MSI2-218ENST00000583821 FKBP8Q14318 412 aa12.52□□□□□ -0.41
MSI2-218ENST00000583821 SLC26A8Q96RN1 970 aa12.52□□□□□ -0.41
MSI2-218ENST00000583821 TMEM94Q12767 1356 aa12.52□□□□□ -0.41
MSI2-218ENST00000583821 REM2Q8IYK8 340 aaPredicted RBP12.51□□□□□ -0.41
MSI2-218ENST00000583821 RBM33Q96EV2 1170 aaKnown RBP12.51□□□□□ -0.41
MSI2-218ENST00000583821 PPARGC1BQ86YN6 1023 aaKnown RBP12.5□□□□□ -0.41
MSI2-218ENST00000583821 RIMS2Q9UQ26 1411 aa12.5□□□□□ -0.41
MSI2-218ENST00000583821 NKTRP30414 1462 aaKnown RBP12.5□□□□□ -0.41
MSI2-218ENST00000583821 SPHKAPQ2M3C7 1700 aa12.5□□□□□ -0.41
MSI2-218ENST00000583821 PHLPP1O60346 1717 aa12.48□□□□□ -0.41
MSI2-218ENST00000583821 ROCK1Q13464 1354 aa12.47□□□□□ -0.41
MSI2-218ENST00000583821 PLEKHG1Q9ULL1 1385 aa12.47□□□□□ -0.41
MSI2-218ENST00000583821 ITGAEP38570 1179 aa12.47□□□□□ -0.41
MSI2-218ENST00000583821 SLC52A1Q9NWF4 448 aa12.47□□□□□ -0.41
MSI2-218ENST00000583821 KCNA6P17658 529 aa12.46□□□□□ -0.41
MSI2-218ENST00000583821 PROSER2Q86WR7 435 aaPredicted RBP12.46□□□□□ -0.41
MSI2-218ENST00000583821 BCANQ96GW7 911 aa12.46□□□□□ -0.41
MSI2-218ENST00000583821 NRXN3Q9Y4C0 1643 aa12.45□□□□□ -0.42
MSI2-218ENST00000583821 DIP2AQ14689 1571 aa12.44□□□□□ -0.42
MSI2-218ENST00000583821 PPP1R15AO75807 674 aaPredicted RBP12.44□□□□□ -0.42
MSI2-218ENST00000583821 CHGAP10645 457 aaKnown RBP12.44□□□□□ -0.42
MSI2-218ENST00000583821 NUTM2DQ5VT03 806 aaPredicted RBP12.44□□□□□ -0.42
MSI2-218ENST00000583821 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.44□□□□□ -0.42
MSI2-218ENST00000583821 FAM135BQ49AJ0 1406 aa12.44□□□□□ -0.42
MSI2-218ENST00000583821 CLTCL1P53675 1640 aa12.43□□□□□ -0.42
MSI2-218ENST00000583821 ADAMTS13Q76LX8 1427 aa12.43□□□□□ -0.42
MSI2-218ENST00000583821 NUP155O75694 1391 aa12.43□□□□□ -0.42
MSI2-218ENST00000583821 COL16A1Q07092 1604 aaPredicted RBP12.42□□□□□ -0.42
MSI2-218ENST00000583821 XRN1Q8IZH2 1706 aaKnown RBP12.42□□□□□ -0.42
MSI2-218ENST00000583821 SETD1AO15047 1707 aaKnown RBP12.41□□□□□ -0.42
MSI2-218ENST00000583821 TRPM2O94759 1503 aa12.41□□□□□ -0.42
MSI2-218ENST00000583821 MSH6P52701 1360 aa12.41□□□□□ -0.42
MSI2-218ENST00000583821 KIF1BO60333 1816 aa12.4□□□□□ -0.42
MSI2-218ENST00000583821 PITPNM1O00562 1244 aa12.4□□□□□ -0.42
MSI2-218ENST00000583821 RGS17Q9UGC6 210 aaPredicted RBP12.4□□□□□ -0.42
MSI2-218ENST00000583821 PTPRUQ92729 1446 aa12.38□□□□□ -0.43
MSI2-218ENST00000583821 SETBP1Q9Y6X0 1596 aa12.38□□□□□ -0.43
MSI2-218ENST00000583821 NALCNQ8IZF0 1738 aa12.37□□□□□ -0.43
MSI2-218ENST00000583821 NEXMIFQ5QGS0 1516 aa12.37□□□□□ -0.43
MSI2-218ENST00000583821 SHPRHQ149N8 1683 aa12.36□□□□□ -0.43
MSI2-218ENST00000583821 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.36□□□□□ -0.43
MSI2-218ENST00000583821 TBX22Q9Y458 520 aa12.36□□□□□ -0.43
MSI2-218ENST00000583821 AHDC1Q5TGY3 1603 aaPredicted RBP12.36□□□□□ -0.43
MSI2-218ENST00000583821 RRBP1Q9P2E9 1410 aaKnown RBP12.36□□□□□ -0.43
MSI2-218ENST00000583821 SLAIN2Q9P270 581 aa12.35□□□□□ -0.43
MSI2-218ENST00000583821 CLEC11AQ9Y240 323 aa12.35□□□□□ -0.43
MSI2-218ENST00000583821 LRP6O75581 1613 aa12.34□□□□□ -0.43
MSI2-218ENST00000583821 HDGFP51858 240 aaKnown RBP12.34□□□□□ -0.43
MSI2-218ENST00000583821 C14orf37Q86TY3 774 aa12.34□□□□□ -0.43
MSI2-218ENST00000583821 NAIPQ13075 1403 aa12.34□□□□□ -0.43
MSI2-218ENST00000583821 NHSL1Q5SYE7 1610 aa12.33□□□□□ -0.43
MSI2-218ENST00000583821 PIK3R4Q99570 1358 aa12.33□□□□□ -0.44
MSI2-218ENST00000583821 POTEAQ6S8J7 498 aa12.33□□□□□ -0.44
MSI2-218ENST00000583821 NCOA3Q9Y6Q9 1424 aa12.32□□□□□ -0.44
MSI2-218ENST00000583821 PPLO60437 1756 aa12.32□□□□□ -0.44
MSI2-218ENST00000583821 ZNF326Q5BKZ1 582 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms