RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 ARHGAP31Q2M1Z3 1444 aa12.12□□□□□ -0.47
CCDC47-205ENST00000582331 SLC26A8Q96RN1 970 aa12.12□□□□□ -0.47
CCDC47-205ENST00000582331 LRRC9Q6ZRR7 1453 aa12.11□□□□□ -0.47
CCDC47-205ENST00000582331 DUOX2Q9NRD8 1548 aa12.11□□□□□ -0.47
CCDC47-205ENST00000582331 JCADQ9P266 1359 aa12.1□□□□□ -0.47
CCDC47-205ENST00000582331 SLAIN2Q9P270 581 aa12.1□□□□□ -0.47
CCDC47-205ENST00000582331 PIK3C2BO00750 1634 aa12.1□□□□□ -0.47
CCDC47-205ENST00000582331 SETD1AO15047 1707 aaKnown RBP12.09□□□□□ -0.47
CCDC47-205ENST00000582331 MSH6P52701 1360 aa12.09□□□□□ -0.47
CCDC47-205ENST00000582331 IDI1Q13907 227 aa12.09□□□□□ -0.47
CCDC47-205ENST00000582331 MAP3K1Q13233 1512 aa12.09□□□□□ -0.47
CCDC47-205ENST00000582331 PRDM15P57071 1507 aaPredicted RBP12.08□□□□□ -0.48
CCDC47-205ENST00000582331 UPF1Q92900 1129 aaKnown RBP eCLIP12.08□□□□□ -0.48
CCDC47-205ENST00000582331 BCANQ96GW7 911 aa12.08□□□□□ -0.48
CCDC47-205ENST00000582331 KANK1Q14678 1352 aa12.07□□□□□ -0.48
CCDC47-205ENST00000582331 EFCAB6Q5THR3 1501 aa12.07□□□□□ -0.48
CCDC47-205ENST00000582331 TET3O43151 1660 aa12.07□□□□□ -0.48
CCDC47-205ENST00000582331 MYOM3Q5VTT5 1437 aa12.07□□□□□ -0.48
CCDC47-205ENST00000582331 RRP7BPQ9NSQ0 103 aa12.07□□□□□ -0.48
CCDC47-205ENST00000582331 KIF15Q9NS87 1388 aa12.06□□□□□ -0.48
CCDC47-205ENST00000582331 PHLPP1O60346 1717 aa12.06□□□□□ -0.48
CCDC47-205ENST00000582331 MEX3CQ5U5Q3 659 aaKnown RBP12.06□□□□□ -0.48
CCDC47-205ENST00000582331 ZNF772Q68DY9 489 aaPredicted RBP12.06□□□□□ -0.48
CCDC47-205ENST00000582331 NKTRP30414 1462 aaKnown RBP12.06□□□□□ -0.48
CCDC47-205ENST00000582331 ERBINQ96RT1 1412 aa12.05□□□□□ -0.48
CCDC47-205ENST00000582331 TRIM52Q96A61 297 aa12.05□□□□□ -0.48
CCDC47-205ENST00000582331 KDM5AP29375 1690 aaKnown RBP12.05□□□□□ -0.48
CCDC47-205ENST00000582331 SPATA31A6Q5VVP1 1343 aa12.05□□□□□ -0.48
CCDC47-205ENST00000582331 ZBTB12Q9Y330 459 aaPredicted RBP12.04□□□□□ -0.48
CCDC47-205ENST00000582331 RBM42Q9BTD8 480 aaKnown RBP12.03□□□□□ -0.48
CCDC47-205ENST00000582331 NWD1Q149M9 1564 aa12.03□□□□□ -0.48
CCDC47-205ENST00000582331 KANK4Q5T7N3 995 aaPredicted RBP12.02□□□□□ -0.49
CCDC47-205ENST00000582331 SLC52A1Q9NWF4 448 aa12.02□□□□□ -0.49
CCDC47-205ENST00000582331 FGD6Q6ZV73 1430 aa12.02□□□□□ -0.49
CCDC47-205ENST00000582331 RXRBP28702 533 aa12.01□□□□□ -0.49
CCDC47-205ENST00000582331 HDGFP51858 240 aaKnown RBP12.01□□□□□ -0.49
CCDC47-205ENST00000582331 C14orf37Q86TY3 774 aa12.01□□□□□ -0.49
CCDC47-205ENST00000582331 ABCC5O15440 1437 aa12.01□□□□□ -0.49
CCDC47-205ENST00000582331 LRP6O75581 1613 aa12□□□□□ -0.49
CCDC47-205ENST00000582331 COL16A1Q07092 1604 aaPredicted RBP12□□□□□ -0.49
CCDC47-205ENST00000582331 NOS1P29475 1434 aa12□□□□□ -0.49
CCDC47-205ENST00000582331 ADGRB3O60242 1522 aa12□□□□□ -0.49
CCDC47-205ENST00000582331 LMTK2Q8IWU2 1503 aa12□□□□□ -0.49
CCDC47-205ENST00000582331 PPP1R15AO75807 674 aaPredicted RBP11.99□□□□□ -0.49
CCDC47-205ENST00000582331 CADPS2Q86UW7 1296 aa11.99□□□□□ -0.49
CCDC47-205ENST00000582331 NCOA3Q9Y6Q9 1424 aa11.99□□□□□ -0.49
CCDC47-205ENST00000582331 VPS8Q8N3P4 1428 aa11.98□□□□□ -0.49
CCDC47-205ENST00000582331 PLEKHG1Q9ULL1 1385 aa11.98□□□□□ -0.49
CCDC47-205ENST00000582331 ATF3P18847 181 aa11.98□□□□□ -0.49
CCDC47-205ENST00000582331 TBX22Q9Y458 520 aa11.98□□□□□ -0.49
CCDC47-205ENST00000582331 CHD2O14647 1828 aaKnown RBP11.97□□□□□ -0.49
CCDC47-205ENST00000582331 C19orf44Q9H6X5 657 aa11.97□□□□□ -0.49
CCDC47-205ENST00000582331 DAPK1P53355 1430 aa11.96□□□□□ -0.49
CCDC47-205ENST00000582331 ANKRD30AQ9BXX3 1397 aa11.96□□□□□ -0.49
CCDC47-205ENST00000582331 NUTM2BA6NNL0 878 aaPredicted RBP11.96□□□□□ -0.49
CCDC47-205ENST00000582331 NUTM2EB1AL46 878 aaPredicted RBP11.96□□□□□ -0.49
CCDC47-205ENST00000582331 NUTM2AQ8IVF1 878 aaPredicted RBP11.96□□□□□ -0.49
CCDC47-205ENST00000582331 CHIC2Q9UKJ5 165 aa11.96□□□□□ -0.49
CCDC47-205ENST00000582331 CROCC2H7BZ55 1655 aa11.96□□□□□ -0.5
CCDC47-205ENST00000582331 ZFYVE9O95405 1425 aa11.95□□□□□ -0.5
CCDC47-205ENST00000582331 RIMS2Q9UQ26 1411 aa11.95□□□□□ -0.5
CCDC47-205ENST00000582331 SHPRHQ149N8 1683 aa11.95□□□□□ -0.5
CCDC47-205ENST00000582331 AHDC1Q5TGY3 1603 aaPredicted RBP11.95□□□□□ -0.5
CCDC47-205ENST00000582331 CDK12Q9NYV4 1490 aaPredicted RBP11.95□□□□□ -0.5
CCDC47-205ENST00000582331 PTPN23Q9H3S7 1636 aa11.94□□□□□ -0.5
CCDC47-205ENST00000582331 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.94□□□□□ -0.5
CCDC47-205ENST00000582331 AFF2P51816 1311 aa11.93□□□□□ -0.5
CCDC47-205ENST00000582331 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.92□□□□□ -0.5
CCDC47-205ENST00000582331 RPRD2Q5VT52 1461 aaKnown RBP11.92□□□□□ -0.5
CCDC47-205ENST00000582331 CHGAP10645 457 aaKnown RBP11.92□□□□□ -0.5
CCDC47-205ENST00000582331 BRINP3Q76B58 766 aa11.92□□□□□ -0.5
CCDC47-205ENST00000582331 PIK3R4Q99570 1358 aa11.92□□□□□ -0.5
CCDC47-205ENST00000582331 RBM6P78332 1123 aaKnown RBP11.9□□□□□ -0.5
CCDC47-205ENST00000582331 NUTM2DQ5VT03 806 aaPredicted RBP11.9□□□□□ -0.5
CCDC47-205ENST00000582331 QTRT2Q9H974 415 aaKnown RBP11.9□□□□□ -0.5
CCDC47-205ENST00000582331 AMOTL2Q9Y2J4 779 aa11.9□□□□□ -0.5
CCDC47-205ENST00000582331 MYO5BQ9ULV0 1848 aa11.9□□□□□ -0.5
CCDC47-205ENST00000582331 TMEM131LA2VDJ0 1609 aa11.89□□□□□ -0.51
CCDC47-205ENST00000582331 DIP2AQ14689 1571 aa11.89□□□□□ -0.51
CCDC47-205ENST00000582331 ADAMTS13Q76LX8 1427 aa11.89□□□□□ -0.51
CCDC47-205ENST00000582331 LRRC59Q96AG4 307 aaKnown RBP11.89□□□□□ -0.51
CCDC47-205ENST00000582331 C8orf37Q96NL8 207 aa11.89□□□□□ -0.51
CCDC47-205ENST00000582331 GCC2Q8IWJ2 1684 aa11.89□□□□□ -0.51
CCDC47-205ENST00000582331 SETD5Q9C0A6 1442 aa11.88□□□□□ -0.51
CCDC47-205ENST00000582331 SRCAPQ6ZRS2 3230 aa11.87□□□□□ -0.51
CCDC47-205ENST00000582331 RGS12O14924 1447 aa11.86□□□□□ -0.51
CCDC47-205ENST00000582331 LOC105371045A0A1W2PR82 267 aa11.86□□□□□ -0.51
CCDC47-205ENST00000582331 NGLY1Q96IV0 654 aa11.86□□□□□ -0.51
CCDC47-205ENST00000582331 ASXL1Q8IXJ9 1541 aa11.86□□□□□ -0.51
CCDC47-205ENST00000582331 DCCP43146 1447 aa11.86□□□□□ -0.51
CCDC47-205ENST00000582331 ANKRD50Q9ULJ7 1429 aa11.86□□□□□ -0.51
CCDC47-205ENST00000582331 ADGRL2O95490 1459 aa11.85□□□□□ -0.51
CCDC47-205ENST00000582331 TRPM2O94759 1503 aa11.85□□□□□ -0.51
CCDC47-205ENST00000582331 PTPRUQ92729 1446 aa11.85□□□□□ -0.51
CCDC47-205ENST00000582331 ATAD2Q6PL18 1390 aa11.83□□□□□ -0.52
CCDC47-205ENST00000582331 ADAMTS2O95450 1211 aa11.83□□□□□ -0.52
CCDC47-205ENST00000582331 ZRANB1Q9UGI0 708 aa11.83□□□□□ -0.52
CCDC47-205ENST00000582331 MST1RQ04912 1400 aa11.83□□□□□ -0.52
CCDC47-205ENST00000582331 NHSL1Q5SYE7 1610 aa11.82□□□□□ -0.52
CCDC47-205ENST00000582331 PNPLA6Q8IY17 1366 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms