RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 EIF2AK4Q9P2K8 1649 aaKnown RBP10.1□□□□□ -0.79
TVP23B-210ENST00000582288 XIRP1Q702N8 1843 aaKnown RBP10.1□□□□□ -0.79
TVP23B-210ENST00000582288 CAMSAP2Q08AD1 1489 aa10.09□□□□□ -0.79
TVP23B-210ENST00000582288 NCOA2Q15596 1464 aa10.09□□□□□ -0.79
TVP23B-210ENST00000582288 LRRC9Q6ZRR7 1453 aa10.09□□□□□ -0.79
TVP23B-210ENST00000582288 CLCN6P51797 869 aa10.08□□□□□ -0.8
TVP23B-210ENST00000582288 TXNDC2Q86VQ3 553 aa10.08□□□□□ -0.8
TVP23B-210ENST00000582288 EID1Q9Y6B2 187 aa10.08□□□□□ -0.8
TVP23B-210ENST00000582288 ARHGAP31Q2M1Z3 1444 aa10.07□□□□□ -0.8
TVP23B-210ENST00000582288 MAST1Q9Y2H9 1570 aa10.07□□□□□ -0.8
TVP23B-210ENST00000582288 LTKP29376 864 aa10.07□□□□□ -0.8
TVP23B-210ENST00000582288 KDM5AP29375 1690 aaKnown RBP10.06□□□□□ -0.8
TVP23B-210ENST00000582288 POTEIP0CG38 1075 aa10.06□□□□□ -0.8
TVP23B-210ENST00000582288 ROBO1Q9Y6N7 1651 aa10.06□□□□□ -0.8
TVP23B-210ENST00000582288 TMEM94Q12767 1356 aa10.05□□□□□ -0.8
TVP23B-210ENST00000582288 MROH1Q8NDA8 1641 aa10.05□□□□□ -0.8
TVP23B-210ENST00000582288 KCNA6P17658 529 aa10.05□□□□□ -0.8
TVP23B-210ENST00000582288 JCADQ9P266 1359 aa10.04□□□□□ -0.8
TVP23B-210ENST00000582288 TMEM2Q9UHN6 1383 aa10.04□□□□□ -0.8
TVP23B-210ENST00000582288 MAP3K1Q13233 1512 aa10.04□□□□□ -0.8
TVP23B-210ENST00000582288 NKTRP30414 1462 aaKnown RBP10.04□□□□□ -0.8
TVP23B-210ENST00000582288 PRDM15P57071 1507 aaPredicted RBP10.03□□□□□ -0.8
TVP23B-210ENST00000582288 TET3O43151 1660 aa10.02□□□□□ -0.8
TVP23B-210ENST00000582288 UPF1Q92900 1129 aaKnown RBP eCLIP10.02□□□□□ -0.81
TVP23B-210ENST00000582288 SPATA31A6Q5VVP1 1343 aa10.02□□□□□ -0.81
TVP23B-210ENST00000582288 NWD1Q149M9 1564 aa10.01□□□□□ -0.81
TVP23B-210ENST00000582288 FGD6Q6ZV73 1430 aa10.01□□□□□ -0.81
TVP23B-210ENST00000582288 ZNF772Q68DY9 489 aaPredicted RBP10.01□□□□□ -0.81
TVP23B-210ENST00000582288 SLAIN2Q9P270 581 aa10.01□□□□□ -0.81
TVP23B-210ENST00000582288 SETD1AO15047 1707 aaKnown RBP10.01□□□□□ -0.81
TVP23B-210ENST00000582288 DUOX2Q9NRD8 1548 aa10.01□□□□□ -0.81
TVP23B-210ENST00000582288 MSH6P52701 1360 aa10.01□□□□□ -0.81
TVP23B-210ENST00000582288 NCOA3Q9Y6Q9 1424 aa10□□□□□ -0.81
TVP23B-210ENST00000582288 CEP152O94986 1710 aa10□□□□□ -0.81
TVP23B-210ENST00000582288 PROSER2Q86WR7 435 aaPredicted RBP10□□□□□ -0.81
TVP23B-210ENST00000582288 DCBLD2Q96PD2 775 aa10□□□□□ -0.81
TVP23B-210ENST00000582288 EFCAB6Q5THR3 1501 aa10□□□□□ -0.81
TVP23B-210ENST00000582288 PIK3C2BO00750 1634 aa10□□□□□ -0.81
TVP23B-210ENST00000582288 PHLPP1O60346 1717 aa9.99□□□□□ -0.81
TVP23B-210ENST00000582288 CDK12Q9NYV4 1490 aaPredicted RBP9.99□□□□□ -0.81
TVP23B-210ENST00000582288 CHADLQ6NUI6 762 aa9.99□□□□□ -0.81
TVP23B-210ENST00000582288 ERBINQ96RT1 1412 aa9.99□□□□□ -0.81
TVP23B-210ENST00000582288 COL16A1Q07092 1604 aaPredicted RBP9.98□□□□□ -0.81
TVP23B-210ENST00000582288 POTEMA6NI47 508 aa9.98□□□□□ -0.81
TVP23B-210ENST00000582288 STAG3Q9UJ98 1225 aa9.97□□□□□ -0.81
TVP23B-210ENST00000582288 LMTK2Q8IWU2 1503 aa9.97□□□□□ -0.81
TVP23B-210ENST00000582288 CD44P16070 742 aaKnown RBP9.96□□□□□ -0.82
TVP23B-210ENST00000582288 IDI1Q13907 227 aa9.96□□□□□ -0.82
TVP23B-210ENST00000582288 FOXD4L1Q9NU39 408 aa9.96□□□□□ -0.82
TVP23B-210ENST00000582288 MYOM3Q5VTT5 1437 aa9.96□□□□□ -0.82
TVP23B-210ENST00000582288 SRCAPQ6ZRS2 3230 aa9.95□□□□□ -0.82
TVP23B-210ENST00000582288 SLC26A8Q96RN1 970 aa9.95□□□□□ -0.82
TVP23B-210ENST00000582288 SLC52A1Q9NWF4 448 aa9.95□□□□□ -0.82
TVP23B-210ENST00000582288 KANK1Q14678 1352 aa9.95□□□□□ -0.82
TVP23B-210ENST00000582288 LRP6O75581 1613 aa9.95□□□□□ -0.82
TVP23B-210ENST00000582288 SHPRHQ149N8 1683 aa9.95□□□□□ -0.82
TVP23B-210ENST00000582288 AHDC1Q5TGY3 1603 aaPredicted RBP9.94□□□□□ -0.82
TVP23B-210ENST00000582288 ADGRB3O60242 1522 aa9.94□□□□□ -0.82
TVP23B-210ENST00000582288 RXRBP28702 533 aa9.94□□□□□ -0.82
TVP23B-210ENST00000582288 PCDH10Q9P2E7 1040 aa9.94□□□□□ -0.82
TVP23B-210ENST00000582288 CFAP65Q6ZU64 1925 aaKnown RBP9.94□□□□□ -0.82
TVP23B-210ENST00000582288 NOS1P29475 1434 aa9.93□□□□□ -0.82
TVP23B-210ENST00000582288 KIF15Q9NS87 1388 aa9.93□□□□□ -0.82
TVP23B-210ENST00000582288 HDGFP51858 240 aaKnown RBP9.93□□□□□ -0.82
TVP23B-210ENST00000582288 MEX3CQ5U5Q3 659 aaKnown RBP9.93□□□□□ -0.82
TVP23B-210ENST00000582288 PLEKHG1Q9ULL1 1385 aa9.92□□□□□ -0.82
TVP23B-210ENST00000582288 CHD2O14647 1828 aaKnown RBP9.92□□□□□ -0.82
TVP23B-210ENST00000582288 PRR29P0C7W0 189 aa9.92□□□□□ -0.82
TVP23B-210ENST00000582288 POTEGQ6S5H5 508 aa9.92□□□□□ -0.82
TVP23B-210ENST00000582288 CADPS2Q86UW7 1296 aa9.92□□□□□ -0.82
TVP23B-210ENST00000582288 TRIM52Q96A61 297 aa9.92□□□□□ -0.82
TVP23B-210ENST00000582288 RBM33Q96EV2 1170 aaKnown RBP9.92□□□□□ -0.82
TVP23B-210ENST00000582288 ZNF692Q9BU19 519 aaPredicted RBP9.91□□□□□ -0.82
TVP23B-210ENST00000582288 TBX22Q9Y458 520 aa9.91□□□□□ -0.82
TVP23B-210ENST00000582288 RPRD2Q5VT52 1461 aaKnown RBP9.91□□□□□ -0.82
TVP23B-210ENST00000582288 ZFYVE9O95405 1425 aa9.9□□□□□ -0.82
TVP23B-210ENST00000582288 PIK3R4Q99570 1358 aa9.9□□□□□ -0.82
TVP23B-210ENST00000582288 C19orf44Q9H6X5 657 aa9.9□□□□□ -0.82
TVP23B-210ENST00000582288 CROCC2H7BZ55 1655 aa9.9□□□□□ -0.83
TVP23B-210ENST00000582288 DIP2AQ14689 1571 aa9.89□□□□□ -0.83
TVP23B-210ENST00000582288 ABCC5O15440 1437 aa9.89□□□□□ -0.83
TVP23B-210ENST00000582288 ATF3P18847 181 aa9.88□□□□□ -0.83
TVP23B-210ENST00000582288 BCANQ96GW7 911 aa9.88□□□□□ -0.83
TVP23B-210ENST00000582288 RRP7BPQ9NSQ0 103 aa9.88□□□□□ -0.83
TVP23B-210ENST00000582288 SSUH2Q9Y2M2 353 aa9.88□□□□□ -0.83
TVP23B-210ENST00000582288 SETD5Q9C0A6 1442 aa9.88□□□□□ -0.83
TVP23B-210ENST00000582288 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.87□□□□□ -0.83
TVP23B-210ENST00000582288 DCCP43146 1447 aa9.87□□□□□ -0.83
TVP23B-210ENST00000582288 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.87□□□□□ -0.83
TVP23B-210ENST00000582288 RBM6P78332 1123 aaKnown RBP9.86□□□□□ -0.83
TVP23B-210ENST00000582288 OTUD5Q96G74 571 aa9.86□□□□□ -0.83
TVP23B-210ENST00000582288 ANKRD30AQ9BXX3 1397 aa9.86□□□□□ -0.83
TVP23B-210ENST00000582288 AFF2P51816 1311 aa9.85□□□□□ -0.83
TVP23B-210ENST00000582288 DAPK1P53355 1430 aa9.85□□□□□ -0.83
TVP23B-210ENST00000582288 VPS8Q8N3P4 1428 aa9.85□□□□□ -0.83
TVP23B-210ENST00000582288 RIMS2Q9UQ26 1411 aa9.85□□□□□ -0.83
TVP23B-210ENST00000582288 BRINP3Q76B58 766 aa9.85□□□□□ -0.83
TVP23B-210ENST00000582288 C14orf37Q86TY3 774 aa9.85□□□□□ -0.83
TVP23B-210ENST00000582288 TMEM131LA2VDJ0 1609 aa9.85□□□□□ -0.83
TVP23B-210ENST00000582288 RGS12O14924 1447 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms