RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 IDI1Q13907 227 aa14.79□□□□□ -0.04
TOP3A-211ENST00000581536 UBR1Q8IWV7 1749 aa14.79□□□□□ -0.04
TOP3A-211ENST00000581536 LTBP4Q8N2S1 1624 aa14.79□□□□□ -0.04
TOP3A-211ENST00000581536 NEURL4Q96JN8 1562 aa14.77□□□□□ -0.04
TOP3A-211ENST00000581536 LMTK2Q8IWU2 1503 aa14.77□□□□□ -0.04
TOP3A-211ENST00000581536 RRBP1Q9P2E9 1410 aaKnown RBP14.77□□□□□ -0.04
TOP3A-211ENST00000581536 LTKP29376 864 aa14.76□□□□□ -0.05
TOP3A-211ENST00000581536 PIK3C2BO00750 1634 aa14.76□□□□□ -0.05
TOP3A-211ENST00000581536 SYNMO15061 1565 aa14.74□□□□□ -0.05
TOP3A-211ENST00000581536 MYO5BQ9ULV0 1848 aa14.74□□□□□ -0.05
TOP3A-211ENST00000581536 UNC13BO14795 1591 aa14.73□□□□□ -0.05
TOP3A-211ENST00000581536 EFCAB6Q5THR3 1501 aa14.73□□□□□ -0.05
TOP3A-211ENST00000581536 TXNDC2Q86VQ3 553 aa14.73□□□□□ -0.05
TOP3A-211ENST00000581536 REM2Q8IYK8 340 aaPredicted RBP14.73□□□□□ -0.05
TOP3A-211ENST00000581536 PROM2Q8N271 834 aa14.73□□□□□ -0.05
TOP3A-211ENST00000581536 STAG3Q9UJ98 1225 aa14.73□□□□□ -0.05
TOP3A-211ENST00000581536 NUP155O75694 1391 aa14.73□□□□□ -0.05
TOP3A-211ENST00000581536 E9PCH4 1651 aa14.72□□□□□ -0.05
TOP3A-211ENST00000581536 TET3O43151 1660 aa14.72□□□□□ -0.05
TOP3A-211ENST00000581536 NOS1P29475 1434 aa14.72□□□□□ -0.05
TOP3A-211ENST00000581536 GCC2Q8IWJ2 1684 aa14.71□□□□□ -0.05
TOP3A-211ENST00000581536 NPHP4O75161 1426 aaPredicted RBP14.71□□□□□ -0.05
TOP3A-211ENST00000581536 MED14O60244 1454 aa14.7□□□□□ -0.06
TOP3A-211ENST00000581536 IQGAP1P46940 1657 aa14.7□□□□□ -0.06
TOP3A-211ENST00000581536 STRCP1A6NGW2 1772 aa14.7□□□□□ -0.06
TOP3A-211ENST00000581536 IQGAP3Q86VI3 1631 aa14.69□□□□□ -0.06
TOP3A-211ENST00000581536 NAIPQ13075 1403 aa14.68□□□□□ -0.06
TOP3A-211ENST00000581536 SLC52A1Q9NWF4 448 aa14.68□□□□□ -0.06
TOP3A-211ENST00000581536 ARHGAP23Q9P227 1491 aa14.68□□□□□ -0.06
TOP3A-211ENST00000581536 SLIT1O75093 1534 aa14.67□□□□□ -0.06
TOP3A-211ENST00000581536 EID1Q9Y6B2 187 aa14.67□□□□□ -0.06
TOP3A-211ENST00000581536 RPRD2Q5VT52 1461 aaKnown RBP14.66□□□□□ -0.06
TOP3A-211ENST00000581536 SCAF11Q99590 1463 aaKnown RBP14.66□□□□□ -0.06
TOP3A-211ENST00000581536 TMEM2Q9UHN6 1383 aa14.66□□□□□ -0.06
TOP3A-211ENST00000581536 CHGAP10645 457 aaKnown RBP14.66□□□□□ -0.06
TOP3A-211ENST00000581536 KDM5AP29375 1690 aaKnown RBP14.65□□□□□ -0.06
TOP3A-211ENST00000581536 NUTM2DQ5VT03 806 aaPredicted RBP14.64□□□□□ -0.07
TOP3A-211ENST00000581536 TRIM52Q96A61 297 aa14.64□□□□□ -0.07
TOP3A-211ENST00000581536 UBAP1LF5GYI3 381 aa14.63□□□□□ -0.07
TOP3A-211ENST00000581536 SLC26A8Q96RN1 970 aa14.63□□□□□ -0.07
TOP3A-211ENST00000581536 TMEM131LA2VDJ0 1609 aa14.63□□□□□ -0.07
TOP3A-211ENST00000581536 ADGRB3O60242 1522 aa14.62□□□□□ -0.07
TOP3A-211ENST00000581536 SPDYE1Q8NFV5 336 aaPredicted RBP14.62□□□□□ -0.07
TOP3A-211ENST00000581536 BCANQ96GW7 911 aa14.6□□□□□ -0.07
TOP3A-211ENST00000581536 IQSEC2Q5JU85 1478 aa14.6□□□□□ -0.07
TOP3A-211ENST00000581536 HFM1A2PYH4 1435 aa14.59□□□□□ -0.07
TOP3A-211ENST00000581536 SPHKAPQ2M3C7 1700 aa14.59□□□□□ -0.07
TOP3A-211ENST00000581536 CPS1P31327 1500 aa14.58□□□□□ -0.08
TOP3A-211ENST00000581536 XIRP1Q702N8 1843 aaKnown RBP14.58□□□□□ -0.08
TOP3A-211ENST00000581536 RIMS2Q9UQ26 1411 aa14.58□□□□□ -0.08
TOP3A-211ENST00000581536 PIP4K2BP78356 416 aa14.57□□□□□ -0.08
TOP3A-211ENST00000581536 RBM33Q96EV2 1170 aaKnown RBP14.57□□□□□ -0.08
TOP3A-211ENST00000581536 ZFYVE9O95405 1425 aa14.57□□□□□ -0.08
TOP3A-211ENST00000581536 LRRC7Q96NW7 1537 aa14.56□□□□□ -0.08
TOP3A-211ENST00000581536 HDGFP51858 240 aaKnown RBP14.55□□□□□ -0.08
TOP3A-211ENST00000581536 PITPNM1O00562 1244 aa14.54□□□□□ -0.08
TOP3A-211ENST00000581536 PPP1R15AO75807 674 aaPredicted RBP14.54□□□□□ -0.08
TOP3A-211ENST00000581536 TOM1O60784 492 aa14.53□□□□□ -0.08
TOP3A-211ENST00000581536 KCNA6P17658 529 aa14.53□□□□□ -0.08
TOP3A-211ENST00000581536 ZNF326Q5BKZ1 582 aaKnown RBP14.53□□□□□ -0.08
TOP3A-211ENST00000581536 CHD2O14647 1828 aaKnown RBP14.52□□□□□ -0.08
TOP3A-211ENST00000581536 KIF1BO60333 1816 aa14.52□□□□□ -0.08
TOP3A-211ENST00000581536 CLTCL1P53675 1640 aa14.52□□□□□ -0.08
TOP3A-211ENST00000581536 ALKQ9UM73 1620 aa14.52□□□□□ -0.08
TOP3A-211ENST00000581536 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.52□□□□□ -0.09
TOP3A-211ENST00000581536 PLEKHG1Q9ULL1 1385 aa14.51□□□□□ -0.09
TOP3A-211ENST00000581536 PROSER2Q86WR7 435 aaPredicted RBP14.51□□□□□ -0.09
TOP3A-211ENST00000581536 MPHOSPH9Q99550 1183 aa14.51□□□□□ -0.09
TOP3A-211ENST00000581536 CLEC11AQ9Y240 323 aa14.51□□□□□ -0.09
TOP3A-211ENST00000581536 TBX22Q9Y458 520 aa14.5□□□□□ -0.09
TOP3A-211ENST00000581536 HSPA1LP34931 641 aa14.48□□□□□ -0.09
TOP3A-211ENST00000581536 FBXO3Q9UK99 471 aa14.48□□□□□ -0.09
TOP3A-211ENST00000581536 ADAMTS13Q76LX8 1427 aa14.48□□□□□ -0.09
TOP3A-211ENST00000581536 SETD5Q9C0A6 1442 aa14.48□□□□□ -0.09
TOP3A-211ENST00000581536 TRPM2O94759 1503 aa14.47□□□□□ -0.09
TOP3A-211ENST00000581536 TMEM94Q12767 1356 aa14.47□□□□□ -0.09
TOP3A-211ENST00000581536 CHRDL2Q6WN34 429 aa14.46□□□□□ -0.09
TOP3A-211ENST00000581536 RAB3GAP2Q9H2M9 1393 aa14.44□□□□□ -0.1
TOP3A-211ENST00000581536 NRXN3Q9Y4C0 1643 aa14.44□□□□□ -0.1
TOP3A-211ENST00000581536 PTPRUQ92729 1446 aa14.43□□□□□ -0.1
TOP3A-211ENST00000581536 NEXMIFQ5QGS0 1516 aa14.43□□□□□ -0.1
TOP3A-211ENST00000581536 RGL3Q3MIN7 710 aa14.43□□□□□ -0.1
TOP3A-211ENST00000581536 AMOTL2Q9Y2J4 779 aa14.43□□□□□ -0.1
TOP3A-211ENST00000581536 NWD1Q149M9 1564 aa14.43□□□□□ -0.1
TOP3A-211ENST00000581536 PRR29P0C7W0 189 aa14.41□□□□□ -0.1
TOP3A-211ENST00000581536 METP08581 1390 aa14.41□□□□□ -0.1
TOP3A-211ENST00000581536 PPLO60437 1756 aa14.39□□□□□ -0.11
TOP3A-211ENST00000581536 SETBP1Q9Y6X0 1596 aa14.39□□□□□ -0.11
TOP3A-211ENST00000581536 DISP3Q9P2K9 1392 aa14.38□□□□□ -0.11
TOP3A-211ENST00000581536 VGFO15240 615 aaPredicted RBP14.38□□□□□ -0.11
TOP3A-211ENST00000581536 DIP2AQ14689 1571 aa14.38□□□□□ -0.11
TOP3A-211ENST00000581536 NKTRP30414 1462 aaKnown RBP14.38□□□□□ -0.11
TOP3A-211ENST00000581536 C14orf37Q86TY3 774 aa14.37□□□□□ -0.11
TOP3A-211ENST00000581536 SLAIN2Q9P270 581 aa14.37□□□□□ -0.11
TOP3A-211ENST00000581536 RPGRIP1LQ68CZ1 1315 aa14.37□□□□□ -0.11
TOP3A-211ENST00000581536 PIK3R4Q99570 1358 aa14.36□□□□□ -0.11
TOP3A-211ENST00000581536 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.36□□□□□ -0.11
TOP3A-211ENST00000581536 ADGRF5Q8IZF2 1346 aa14.36□□□□□ -0.11
TOP3A-211ENST00000581536 CCDC144AA2RUR9 1427 aa14.35□□□□□ -0.11
TOP3A-211ENST00000581536 SETD1AO15047 1707 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms