RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 MADDQ8WXG6 1647 aa8.67□□□□□ -1.02
RNU4ATAC-201ENST00000580972 NRXN1Q9ULB1 1477 aa8.67□□□□□ -1.02
RNU4ATAC-201ENST00000580972 PREX1Q8TCU6 1659 aa8.66□□□□□ -1.02
RNU4ATAC-201ENST00000580972 NEXMIFQ5QGS0 1516 aa8.66□□□□□ -1.02
RNU4ATAC-201ENST00000580972 PIK3C2GO75747 1445 aa8.66□□□□□ -1.02
RNU4ATAC-201ENST00000580972 RIMS2Q9UQ26 1411 aa8.66□□□□□ -1.02
RNU4ATAC-201ENST00000580972 KIF7Q2M1P5 1343 aa8.66□□□□□ -1.02
RNU4ATAC-201ENST00000580972 RPGRIP1LQ68CZ1 1315 aa8.66□□□□□ -1.02
RNU4ATAC-201ENST00000580972 MIER1Q8N108 512 aa8.66□□□□□ -1.02
RNU4ATAC-201ENST00000580972 POLR3GLQ9BT43 218 aa8.66□□□□□ -1.02
RNU4ATAC-201ENST00000580972 CCDC7Q96M83 1385 aa8.65□□□□□ -1.02
RNU4ATAC-201ENST00000580972 C14orf93Q9H972 538 aaKnown RBP8.65□□□□□ -1.02
RNU4ATAC-201ENST00000580972 NEURL4Q96JN8 1562 aa8.65□□□□□ -1.03
RNU4ATAC-201ENST00000580972 TESK2Q96S53 571 aa8.64□□□□□ -1.03
RNU4ATAC-201ENST00000580972 TMEM131LA2VDJ0 1609 aa8.64□□□□□ -1.03
RNU4ATAC-201ENST00000580972 TRPM1Q7Z4N2 1603 aa8.64□□□□□ -1.03
RNU4ATAC-201ENST00000580972 ZFYVE9O95405 1425 aa8.63□□□□□ -1.03
RNU4ATAC-201ENST00000580972 DISP3Q9P2K9 1392 aa8.63□□□□□ -1.03
RNU4ATAC-201ENST00000580972 LTKP29376 864 aa8.63□□□□□ -1.03
RNU4ATAC-201ENST00000580972 STK26Q9P289 416 aa8.63□□□□□ -1.03
RNU4ATAC-201ENST00000580972 TRAK1Q9UPV9 953 aa8.63□□□□□ -1.03
RNU4ATAC-201ENST00000580972 TMEM2Q9UHN6 1383 aa8.62□□□□□ -1.03
RNU4ATAC-201ENST00000580972 VGFO15240 615 aaPredicted RBP8.62□□□□□ -1.03
RNU4ATAC-201ENST00000580972 ASXL1Q8IXJ9 1541 aa8.62□□□□□ -1.03
RNU4ATAC-201ENST00000580972 PTPRMP28827 1452 aa8.62□□□□□ -1.03
RNU4ATAC-201ENST00000580972 SCAF11Q99590 1463 aaKnown RBP8.62□□□□□ -1.03
RNU4ATAC-201ENST00000580972 STAC3Q96MF2 364 aa8.61□□□□□ -1.03
RNU4ATAC-201ENST00000580972 ADGRB1O14514 1584 aa8.61□□□□□ -1.03
RNU4ATAC-201ENST00000580972 SAFB2Q14151 953 aaKnown RBP eCLIP8.6□□□□□ -1.03
RNU4ATAC-201ENST00000580972 METP08581 1390 aa8.6□□□□□ -1.03
RNU4ATAC-201ENST00000580972 RIMS1Q86UR5 1692 aaKnown RBP8.59□□□□□ -1.03
RNU4ATAC-201ENST00000580972 NLRP1Q9C000 1473 aa8.59□□□□□ -1.03
RNU4ATAC-201ENST00000580972 KDM4FA0A1W2PPD8 638 aa8.59□□□□□ -1.03
RNU4ATAC-201ENST00000580972 CNGB1Q14028 1251 aaPredicted RBP8.59□□□□□ -1.03
RNU4ATAC-201ENST00000580972 TXNDC2Q86VQ3 553 aa8.59□□□□□ -1.03
RNU4ATAC-201ENST00000580972 ADAMTSL3P82987 1691 aa8.59□□□□□ -1.03
RNU4ATAC-201ENST00000580972 BCANQ96GW7 911 aa8.58□□□□□ -1.04
RNU4ATAC-201ENST00000580972 C3P01024 1663 aa8.58□□□□□ -1.04
RNU4ATAC-201ENST00000580972 PLEKHH1Q9ULM0 1364 aa8.58□□□□□ -1.04
RNU4ATAC-201ENST00000580972 ADAMTS13Q76LX8 1427 aa8.57□□□□□ -1.04
RNU4ATAC-201ENST00000580972 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.57□□□□□ -1.04
RNU4ATAC-201ENST00000580972 SLC26A8Q96RN1 970 aa8.57□□□□□ -1.04
RNU4ATAC-201ENST00000580972 FER1L4A9Z1Z3 1794 aa8.57□□□□□ -1.04
RNU4ATAC-201ENST00000580972 IFT172Q9UG01 1749 aa8.57□□□□□ -1.04
RNU4ATAC-201ENST00000580972 CENPJQ9HC77 1338 aaPredicted RBP8.56□□□□□ -1.04
RNU4ATAC-201ENST00000580972 CFAP65Q6ZU64 1925 aaKnown RBP8.56□□□□□ -1.04
RNU4ATAC-201ENST00000580972 YTHDC2Q9H6S0 1430 aaKnown RBP8.56□□□□□ -1.04
RNU4ATAC-201ENST00000580972 WAPLQ7Z5K2 1190 aa8.56□□□□□ -1.04
RNU4ATAC-201ENST00000580972 PRAM1Q96QH2 718 aa8.56□□□□□ -1.04
RNU4ATAC-201ENST00000580972 ARHGAP23Q9P227 1491 aa8.56□□□□□ -1.04
RNU4ATAC-201ENST00000580972 PPLO60437 1756 aa8.56□□□□□ -1.04
RNU4ATAC-201ENST00000580972 LAMC1P11047 1609 aa8.55□□□□□ -1.04
RNU4ATAC-201ENST00000580972 ALKQ9UM73 1620 aa8.55□□□□□ -1.04
RNU4ATAC-201ENST00000580972 KIF1BO60333 1816 aa8.55□□□□□ -1.04
RNU4ATAC-201ENST00000580972 TMF1P82094 1093 aa8.55□□□□□ -1.04
RNU4ATAC-201ENST00000580972 THEMISQ8N1K5 641 aaPredicted RBP8.55□□□□□ -1.04
RNU4ATAC-201ENST00000580972 LRPPRCP42704 1394 aaKnown RBP8.55□□□□□ -1.04
RNU4ATAC-201ENST00000580972 EIF3AQ14152 1382 aaKnown RBP8.55□□□□□ -1.04
RNU4ATAC-201ENST00000580972 PLEKHG1Q9ULL1 1385 aa8.55□□□□□ -1.04
RNU4ATAC-201ENST00000580972 MINK1Q8N4C8 1332 aaPredicted RBP8.54□□□□□ -1.04
RNU4ATAC-201ENST00000580972 PTPRUQ92729 1446 aa8.54□□□□□ -1.04
RNU4ATAC-201ENST00000580972 MYO3AQ8NEV4 1616 aa8.54□□□□□ -1.04
RNU4ATAC-201ENST00000580972 NCKAP5LQ9HCH0 1330 aa8.54□□□□□ -1.04
RNU4ATAC-201ENST00000580972 CEP170BQ9Y4F5 1589 aaPredicted RBP8.53□□□□□ -1.04
RNU4ATAC-201ENST00000580972 SETBP1Q9Y6X0 1596 aa8.53□□□□□ -1.04
RNU4ATAC-201ENST00000580972 ROBO2Q9HCK4 1378 aa8.53□□□□□ -1.04
RNU4ATAC-201ENST00000580972 HSPA2P54652 639 aa8.53□□□□□ -1.04
RNU4ATAC-201ENST00000580972 EID1Q9Y6B2 187 aa8.53□□□□□ -1.04
RNU4ATAC-201ENST00000580972 NRXN3Q9Y4C0 1643 aa8.53□□□□□ -1.04
RNU4ATAC-201ENST00000580972 SLIT1O75093 1534 aa8.53□□□□□ -1.04
RNU4ATAC-201ENST00000580972 IQGAP1P46940 1657 aa8.53□□□□□ -1.04
RNU4ATAC-201ENST00000580972 UBR1Q8IWV7 1749 aa8.52□□□□□ -1.05
RNU4ATAC-201ENST00000580972 CCDC184Q52MB2 194 aa8.52□□□□□ -1.05
RNU4ATAC-201ENST00000580972 PANK3Q9H999 370 aa8.52□□□□□ -1.05
RNU4ATAC-201ENST00000580972 CABP2Q9NPB3 220 aa8.52□□□□□ -1.05
RNU4ATAC-201ENST00000580972 POGKQ9P215 609 aa8.52□□□□□ -1.05
RNU4ATAC-201ENST00000580972 MYO5BQ9ULV0 1848 aa8.52□□□□□ -1.05
RNU4ATAC-201ENST00000580972 MED14O60244 1454 aa8.51□□□□□ -1.05
RNU4ATAC-201ENST00000580972 TULP4Q9NRJ4 1543 aa8.51□□□□□ -1.05
RNU4ATAC-201ENST00000580972 HDGFP51858 240 aaKnown RBP8.51□□□□□ -1.05
RNU4ATAC-201ENST00000580972 ABCC11Q96J66 1382 aa8.5□□□□□ -1.05
RNU4ATAC-201ENST00000580972 ANP32CO43423 234 aa8.5□□□□□ -1.05
RNU4ATAC-201ENST00000580972 ANKLE2Q86XL3 938 aa8.5□□□□□ -1.05
RNU4ATAC-201ENST00000580972 RBM33Q96EV2 1170 aaKnown RBP8.5□□□□□ -1.05
RNU4ATAC-201ENST00000580972 YTHDC1Q96MU7 727 aaKnown RBP8.5□□□□□ -1.05
RNU4ATAC-201ENST00000580972 KIAA1210Q9ULL0 1709 aa8.5□□□□□ -1.05
RNU4ATAC-201ENST00000580972 SLC12A5Q9H2X9 1139 aa8.49□□□□□ -1.05
RNU4ATAC-201ENST00000580972 AMOTL2Q9Y2J4 779 aa8.49□□□□□ -1.05
RNU4ATAC-201ENST00000580972 TBX22Q9Y458 520 aa8.49□□□□□ -1.05
RNU4ATAC-201ENST00000580972 SBNO2Q9Y2G9 1366 aa8.48□□□□□ -1.05
RNU4ATAC-201ENST00000580972 PER1O15534 1290 aaPredicted RBP8.48□□□□□ -1.05
RNU4ATAC-201ENST00000580972 KCNA6P17658 529 aa8.48□□□□□ -1.05
RNU4ATAC-201ENST00000580972 TMC1Q8TDI8 760 aa8.48□□□□□ -1.05
RNU4ATAC-201ENST00000580972 CARD14Q9BXL6 1004 aa8.48□□□□□ -1.05
RNU4ATAC-201ENST00000580972 PRKRIP1Q9H875 184 aaPredicted RBP8.48□□□□□ -1.05
RNU4ATAC-201ENST00000580972 NPHP4O75161 1426 aaPredicted RBP8.47□□□□□ -1.05
RNU4ATAC-201ENST00000580972 SRPK2P78362 688 aaKnown RBP8.47□□□□□ -1.05
RNU4ATAC-201ENST00000580972 CC2D1BQ5T0F9 858 aaKnown RBP8.47□□□□□ -1.05
RNU4ATAC-201ENST00000580972 CDK19Q9BWU1 502 aa8.47□□□□□ -1.05
RNU4ATAC-201ENST00000580972 EVC2Q86UK5 1308 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms