RNA–Protein interactions for RNA: ENST00000580920.1

MIR4258-201, Transcript of microRNA 4258, humanhuman

BASIC

Gene MIR4258, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR4258-201ENST00000580920 NUTM2BA6NNL0 878 aaPredicted RBP12.75□□□□□ -0.37
MIR4258-201ENST00000580920 NUTM2EB1AL46 878 aaPredicted RBP12.75□□□□□ -0.37
MIR4258-201ENST00000580920 NUTM2AQ8IVF1 878 aaPredicted RBP12.75□□□□□ -0.37
MIR4258-201ENST00000580920 ASXL1Q8IXJ9 1541 aa12.74□□□□□ -0.37
MIR4258-201ENST00000580920 CROCC2H7BZ55 1655 aa12.73□□□□□ -0.37
MIR4258-201ENST00000580920 NHSL1Q5SYE7 1610 aa12.73□□□□□ -0.37
MIR4258-201ENST00000580920 ZFYVE9O95405 1425 aa12.73□□□□□ -0.37
MIR4258-201ENST00000580920 TSPY4P0CV99 314 aa12.72□□□□□ -0.37
MIR4258-201ENST00000580920 TSPY10P0CW01 314 aa12.72□□□□□ -0.37
MIR4258-201ENST00000580920 RSPH4AQ5TD94 716 aa12.72□□□□□ -0.37
MIR4258-201ENST00000580920 STAG3Q9UJ98 1225 aa12.72□□□□□ -0.37
MIR4258-201ENST00000580920 LMTK2Q8IWU2 1503 aa12.72□□□□□ -0.37
MIR4258-201ENST00000580920 ERBINQ96RT1 1412 aa12.71□□□□□ -0.37
MIR4258-201ENST00000580920 ATAD2Q6PL18 1390 aa12.71□□□□□ -0.37
MIR4258-201ENST00000580920 KIF15Q9NS87 1388 aa12.71□□□□□ -0.37
MIR4258-201ENST00000580920 IDI1Q13907 227 aa12.71□□□□□ -0.37
MIR4258-201ENST00000580920 NUTM2DQ5VT03 806 aaPredicted RBP12.71□□□□□ -0.37
MIR4258-201ENST00000580920 MYO5BQ9ULV0 1848 aa12.71□□□□□ -0.38
MIR4258-201ENST00000580920 NOS1P29475 1434 aa12.71□□□□□ -0.38
MIR4258-201ENST00000580920 GCC2Q8IWJ2 1684 aa12.7□□□□□ -0.38
MIR4258-201ENST00000580920 PLEKHG1Q9ULL1 1385 aa12.7□□□□□ -0.38
MIR4258-201ENST00000580920 BRINP3Q76B58 766 aa12.69□□□□□ -0.38
MIR4258-201ENST00000580920 C8orf37Q96NL8 207 aa12.69□□□□□ -0.38
MIR4258-201ENST00000580920 SETD5Q9C0A6 1442 aa12.69□□□□□ -0.38
MIR4258-201ENST00000580920 NCOA3Q9Y6Q9 1424 aa12.68□□□□□ -0.38
MIR4258-201ENST00000580920 PNPLA6Q8IY17 1366 aa12.68□□□□□ -0.38
MIR4258-201ENST00000580920 LRP5O75197 1615 aa12.67□□□□□ -0.38
MIR4258-201ENST00000580920 RBM6P78332 1123 aaKnown RBP12.67□□□□□ -0.38
MIR4258-201ENST00000580920 C14orf37Q86TY3 774 aa12.67□□□□□ -0.38
MIR4258-201ENST00000580920 ZRANB1Q9UGI0 708 aa12.67□□□□□ -0.38
MIR4258-201ENST00000580920 ADAMTS13Q76LX8 1427 aa12.67□□□□□ -0.38
MIR4258-201ENST00000580920 RIMS2Q9UQ26 1411 aa12.66□□□□□ -0.38
MIR4258-201ENST00000580920 BCANQ96GW7 911 aa12.66□□□□□ -0.38
MIR4258-201ENST00000580920 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.66□□□□□ -0.38
MIR4258-201ENST00000580920 MST1RQ04912 1400 aa12.65□□□□□ -0.38
MIR4258-201ENST00000580920 QTRT2Q9H974 415 aaKnown RBP12.65□□□□□ -0.38
MIR4258-201ENST00000580920 TMEM131LA2VDJ0 1609 aa12.65□□□□□ -0.38
MIR4258-201ENST00000580920 TRPM2O94759 1503 aa12.64□□□□□ -0.39
MIR4258-201ENST00000580920 CADPS2Q86UW7 1296 aa12.64□□□□□ -0.39
MIR4258-201ENST00000580920 XRN1Q8IZH2 1706 aaKnown RBP12.64□□□□□ -0.39
MIR4258-201ENST00000580920 DCCP43146 1447 aa12.63□□□□□ -0.39
MIR4258-201ENST00000580920 PTPRUQ92729 1446 aa12.63□□□□□ -0.39
MIR4258-201ENST00000580920 DDX17Q92841 729 aaKnown RBP12.63□□□□□ -0.39
MIR4258-201ENST00000580920 MYOM3Q5VTT5 1437 aa12.62□□□□□ -0.39
MIR4258-201ENST00000580920 KANK1Q14678 1352 aa12.62□□□□□ -0.39
MIR4258-201ENST00000580920 ATF3P18847 181 aa12.62□□□□□ -0.39
MIR4258-201ENST00000580920 ABCC5O15440 1437 aa12.61□□□□□ -0.39
MIR4258-201ENST00000580920 UNC13BO14795 1591 aa12.6□□□□□ -0.39
MIR4258-201ENST00000580920 NALCNQ8IZF0 1738 aa12.6□□□□□ -0.39
MIR4258-201ENST00000580920 PPP1R15AO75807 674 aaPredicted RBP12.6□□□□□ -0.39
MIR4258-201ENST00000580920 C19orf44Q9H6X5 657 aa12.6□□□□□ -0.39
MIR4258-201ENST00000580920 RRP7BPQ9NSQ0 103 aa12.6□□□□□ -0.39
MIR4258-201ENST00000580920 ATRNO75882 1429 aa12.6□□□□□ -0.39
MIR4258-201ENST00000580920 ADAMTS2O95450 1211 aa12.59□□□□□ -0.39
MIR4258-201ENST00000580920 NRXN3Q9Y4C0 1643 aa12.59□□□□□ -0.39
MIR4258-201ENST00000580920 DAPK1P53355 1430 aa12.57□□□□□ -0.4
MIR4258-201ENST00000580920 NGLY1Q96IV0 654 aa12.57□□□□□ -0.4
MIR4258-201ENST00000580920 TBX22Q9Y458 520 aa12.57□□□□□ -0.4
MIR4258-201ENST00000580920 LAMC1P11047 1609 aa12.57□□□□□ -0.4
MIR4258-201ENST00000580920 RPRD2Q5VT52 1461 aaKnown RBP12.57□□□□□ -0.4
MIR4258-201ENST00000580920 PIK3R4Q99570 1358 aa12.56□□□□□ -0.4
MIR4258-201ENST00000580920 PTPN23Q9H3S7 1636 aa12.56□□□□□ -0.4
MIR4258-201ENST00000580920 SLC52A1Q9NWF4 448 aa12.55□□□□□ -0.4
MIR4258-201ENST00000580920 USP21Q9UK80 565 aa12.55□□□□□ -0.4
MIR4258-201ENST00000580920 COL22A1Q8NFW1 1626 aaPredicted RBP12.55□□□□□ -0.4
MIR4258-201ENST00000580920 ADGRL3Q9HAR2 1447 aa12.54□□□□□ -0.4
MIR4258-201ENST00000580920 LRRC59Q96AG4 307 aaKnown RBP12.54□□□□□ -0.4
MIR4258-201ENST00000580920 FOXD1Q16676 465 aa12.53□□□□□ -0.4
MIR4258-201ENST00000580920 TRPC5Q9UL62 973 aaPredicted RBP12.53□□□□□ -0.4
MIR4258-201ENST00000580920 BLMP54132 1417 aaPredicted RBP12.53□□□□□ -0.4
MIR4258-201ENST00000580920 MYOM2P54296 1465 aa12.53□□□□□ -0.4
MIR4258-201ENST00000580920 BCL9LQ86UU0 1499 aa12.53□□□□□ -0.4
MIR4258-201ENST00000580920 GLI3P10071 1580 aa12.52□□□□□ -0.4
MIR4258-201ENST00000580920 AMOTL2Q9Y2J4 779 aa12.52□□□□□ -0.41
MIR4258-201ENST00000580920 PTCH1Q13635 1447 aa12.52□□□□□ -0.41
MIR4258-201ENST00000580920 KANK4Q5T7N3 995 aaPredicted RBP12.51□□□□□ -0.41
MIR4258-201ENST00000580920 DEFB132Q7Z7B7 95 aa12.51□□□□□ -0.41
MIR4258-201ENST00000580920 C1orf167Q5SNV9 1468 aa12.51□□□□□ -0.41
MIR4258-201ENST00000580920 E9PCH4 1651 aa12.5□□□□□ -0.41
MIR4258-201ENST00000580920 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.49□□□□□ -0.41
MIR4258-201ENST00000580920 MARF1Q9Y4F3 1742 aaKnown RBP12.49□□□□□ -0.41
MIR4258-201ENST00000580920 FNBP4Q8N3X1 1017 aaPredicted RBP12.49□□□□□ -0.41
MIR4258-201ENST00000580920 SPHKAPQ2M3C7 1700 aa12.48□□□□□ -0.41
MIR4258-201ENST00000580920 VPS8Q8N3P4 1428 aa12.48□□□□□ -0.41
MIR4258-201ENST00000580920 ANKRD30AQ9BXX3 1397 aa12.48□□□□□ -0.41
MIR4258-201ENST00000580920 CHGAP10645 457 aaKnown RBP12.48□□□□□ -0.41
MIR4258-201ENST00000580920 CCDC125Q86Z20 511 aa12.48□□□□□ -0.41
MIR4258-201ENST00000580920 BRWD3Q6RI45 1802 aa12.48□□□□□ -0.41
MIR4258-201ENST00000580920 ADGRL2O95490 1459 aa12.47□□□□□ -0.41
MIR4258-201ENST00000580920 RALGAPBQ86X10 1494 aa12.47□□□□□ -0.41
MIR4258-201ENST00000580920 METP08581 1390 aa12.47□□□□□ -0.41
MIR4258-201ENST00000580920 PSDA5PKW4 1024 aaPredicted RBP12.47□□□□□ -0.41
MIR4258-201ENST00000580920 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.47□□□□□ -0.41
MIR4258-201ENST00000580920 CHIC2Q9UKJ5 165 aa12.47□□□□□ -0.41
MIR4258-201ENST00000580920 IQGAP3Q86VI3 1631 aa12.47□□□□□ -0.41
MIR4258-201ENST00000580920 SOS2Q07890 1332 aaPredicted RBP12.45□□□□□ -0.42
MIR4258-201ENST00000580920 PXDNQ92626 1479 aa12.43□□□□□ -0.42
MIR4258-201ENST00000580920 HRCP23327 699 aa12.43□□□□□ -0.42
MIR4258-201ENST00000580920 HDGFP51858 240 aaKnown RBP12.43□□□□□ -0.42
MIR4258-201ENST00000580920 GJD4Q96KN9 370 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms