RNA–Protein interactions for RNA: ENST00000580813.1

VNN3-214, Transcript of vanin 3, humanhuman

TSL 5

Gene VNN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-214ENST00000580813 PRR14Q9BWN1 585 aa13.01□□□□□ -0.33
VNN3-214ENST00000580813 OATP04181 439 aa12.99□□□□□ -0.33
VNN3-214ENST00000580813 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.98□□□□□ -0.33
VNN3-214ENST00000580813 PPP1R18Q6NYC8 613 aa12.98□□□□□ -0.33
VNN3-214ENST00000580813 NKX2-3Q8TAU0 364 aa12.98□□□□□ -0.33
VNN3-214ENST00000580813 PCDHB3Q9Y5E6 796 aa12.98□□□□□ -0.33
VNN3-214ENST00000580813 GNPATO15228 680 aa12.97□□□□□ -0.33
VNN3-214ENST00000580813 PXYLP1Q8TE99 480 aa12.97□□□□□ -0.33
VNN3-214ENST00000580813 FECHP22830 423 aa12.96□□□□□ -0.33
VNN3-214ENST00000580813 VSIG10Q8N0Z9 540 aa12.95□□□□□ -0.34
VNN3-214ENST00000580813 KMT5BQ4FZB7 885 aa12.94□□□□□ -0.34
VNN3-214ENST00000580813 METTL3Q86U44 580 aaKnown RBP12.94□□□□□ -0.34
VNN3-214ENST00000580813 ZPR1O75312 459 aa12.93□□□□□ -0.34
VNN3-214ENST00000580813 CFHP08603 1231 aa12.93□□□□□ -0.34
VNN3-214ENST00000580813 BLOC1S3Q6QNY0 202 aa12.93□□□□□ -0.34
VNN3-214ENST00000580813 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.93□□□□□ -0.34
VNN3-214ENST00000580813 GPR37O15354 613 aa12.92□□□□□ -0.34
VNN3-214ENST00000580813 SLC10A3P09131 477 aa12.91□□□□□ -0.34
VNN3-214ENST00000580813 GPIHBP1Q8IV16 184 aa12.91□□□□□ -0.34
VNN3-214ENST00000580813 PRKD2Q9BZL6 878 aa12.91□□□□□ -0.34
VNN3-214ENST00000580813 ACTN4O43707 911 aaKnown RBP12.9□□□□□ -0.34
VNN3-214ENST00000580813 GGCXP38435 758 aa12.9□□□□□ -0.34
VNN3-214ENST00000580813 RSPH4AQ5TD94 716 aa12.87□□□□□ -0.35
VNN3-214ENST00000580813 TULP1O00294 542 aaPredicted RBP12.85□□□□□ -0.35
VNN3-214ENST00000580813 NLRP7Q8WX94 980 aa12.85□□□□□ -0.35
VNN3-214ENST00000580813 TLL1O43897 1013 aa12.84□□□□□ -0.35
VNN3-214ENST00000580813 RDH13Q8NBN7 331 aa12.83□□□□□ -0.36
VNN3-214ENST00000580813 DAXXQ9UER7 740 aaPredicted RBP12.83□□□□□ -0.36
VNN3-214ENST00000580813 Q6ZNB5 142 aa12.82□□□□□ -0.36
VNN3-214ENST00000580813 TMUB1Q9BVT8 246 aa12.82□□□□□ -0.36
VNN3-214ENST00000580813 V9GY48 417 aaPredicted RBP12.81□□□□□ -0.36
VNN3-214ENST00000580813 DDX11L8A8MPP1 907 aa12.8□□□□□ -0.36
VNN3-214ENST00000580813 NR1I2O75469 434 aa12.8□□□□□ -0.36
VNN3-214ENST00000580813 GFRA3O60609 400 aa12.79□□□□□ -0.36
VNN3-214ENST00000580813 PUS10Q3MIT2 529 aaKnown RBP12.79□□□□□ -0.36
VNN3-214ENST00000580813 PHOX2BQ99453 314 aa12.79□□□□□ -0.36
VNN3-214ENST00000580813 RNF223E7ERA6 249 aa12.77□□□□□ -0.37
VNN3-214ENST00000580813 LAPTM4AQ15012 233 aa12.77□□□□□ -0.37
VNN3-214ENST00000580813 S1PR4O95977 384 aa12.76□□□□□ -0.37
VNN3-214ENST00000580813 SCUBE3Q8IX30 993 aa12.75□□□□□ -0.37
VNN3-214ENST00000580813 ADH1BP00325 375 aa12.74□□□□□ -0.37
VNN3-214ENST00000580813 SULF1Q8IWU6 871 aa12.74□□□□□ -0.37
VNN3-214ENST00000580813 PPEF1O14829 653 aaPredicted RBP12.73□□□□□ -0.37
VNN3-214ENST00000580813 FUT2Q10981 343 aa12.72□□□□□ -0.37
VNN3-214ENST00000580813 MAP2K5Q13163 448 aa12.71□□□□□ -0.37
VNN3-214ENST00000580813 SLC19A1P41440 591 aa12.7□□□□□ -0.38
VNN3-214ENST00000580813 SLC6A16Q9GZN6 736 aa12.7□□□□□ -0.38
VNN3-214ENST00000580813 GCGRP47871 477 aa12.69□□□□□ -0.38
VNN3-214ENST00000580813 ANKLE1Q8NAG6 615 aa12.69□□□□□ -0.38
VNN3-214ENST00000580813 SPSB2Q99619 263 aa12.69□□□□□ -0.38
VNN3-214ENST00000580813 NRG2O14511 850 aaPredicted RBP12.68□□□□□ -0.38
VNN3-214ENST00000580813 ATP6V1AP38606 617 aa12.68□□□□□ -0.38
VNN3-214ENST00000580813 MORN1Q5T089 497 aa12.68□□□□□ -0.38
VNN3-214ENST00000580813 PDZRN3Q9UPQ7 1066 aa12.68□□□□□ -0.38
VNN3-214ENST00000580813 IRF6O14896 467 aa12.67□□□□□ -0.38
VNN3-214ENST00000580813 EMID1Q96A84 441 aaPredicted RBP12.65□□□□□ -0.38
VNN3-214ENST00000580813 MINK1Q8N4C8 1332 aaPredicted RBP12.64□□□□□ -0.39
VNN3-214ENST00000580813 SLC27A5Q9Y2P5 690 aa12.64□□□□□ -0.39
VNN3-214ENST00000580813 MDM2Q00987 491 aaPredicted RBP12.63□□□□□ -0.39
VNN3-214ENST00000580813 SPRYD7Q5W111 196 aa12.62□□□□□ -0.39
VNN3-214ENST00000580813 TRAF7Q6Q0C0 670 aa12.62□□□□□ -0.39
VNN3-214ENST00000580813 LIAT1Q6ZQX7 453 aa12.62□□□□□ -0.39
VNN3-214ENST00000580813 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.62□□□□□ -0.39
VNN3-214ENST00000580813 FMNL1O95466 1100 aaPredicted RBP12.61□□□□□ -0.39
VNN3-214ENST00000580813 GRIPAP1Q4V328 841 aa12.61□□□□□ -0.39
VNN3-214ENST00000580813 CCDC102AQ96A19 550 aa12.61□□□□□ -0.39
VNN3-214ENST00000580813 THAP11Q96EK4 314 aa12.6□□□□□ -0.39
VNN3-214ENST00000580813 CD46P15529 392 aa12.59□□□□□ -0.39
VNN3-214ENST00000580813 PLA2G2CQ5R387 149 aa12.59□□□□□ -0.39
VNN3-214ENST00000580813 ZNF598Q86UK7 904 aaKnown RBP12.59□□□□□ -0.39
VNN3-214ENST00000580813 LCE2BO14633 110 aa12.58□□□□□ -0.4
VNN3-214ENST00000580813 LMOD2Q6P5Q4 547 aa12.58□□□□□ -0.4
VNN3-214ENST00000580813 ZNF697Q5TEC3 545 aa12.57□□□□□ -0.4
VNN3-214ENST00000580813 TRIM67Q6ZTA4 783 aa12.56□□□□□ -0.4
VNN3-214ENST00000580813 BRICD5Q6PL45 260 aa12.55□□□□□ -0.4
VNN3-214ENST00000580813 RNF19BQ6ZMZ0 732 aa12.55□□□□□ -0.4
VNN3-214ENST00000580813 FAM160A2Q8N612 972 aaPredicted RBP12.55□□□□□ -0.4
VNN3-214ENST00000580813 KRI1Q8N9T8 703 aaKnown RBP12.55□□□□□ -0.4
VNN3-214ENST00000580813 KDM4AO75164 1064 aa12.54□□□□□ -0.4
VNN3-214ENST00000580813 FCF1Q9Y324 198 aaKnown RBP12.54□□□□□ -0.4
VNN3-214ENST00000580813 SALL2Q9Y467 1007 aaPredicted RBP12.54□□□□□ -0.4
VNN3-214ENST00000580813 GPCPD1Q9NPB8 672 aa12.53□□□□□ -0.4
VNN3-214ENST00000580813 PRDM9Q9NQV7 894 aa12.53□□□□□ -0.4
VNN3-214ENST00000580813 CLCN1P35523 988 aa12.52□□□□□ -0.41
VNN3-214ENST00000580813 TNFRSF10AO00220 468 aa12.51□□□□□ -0.41
VNN3-214ENST00000580813 Q3C1V9 767 aa12.51□□□□□ -0.41
VNN3-214ENST00000580813 PRR20EP86478 221 aa12.49□□□□□ -0.41
VNN3-214ENST00000580813 PRR20CP86479 221 aa12.49□□□□□ -0.41
VNN3-214ENST00000580813 PRR20DP86480 221 aa12.49□□□□□ -0.41
VNN3-214ENST00000580813 PRR20BP86481 221 aa12.49□□□□□ -0.41
VNN3-214ENST00000580813 PRR20AP86496 221 aa12.49□□□□□ -0.41
VNN3-214ENST00000580813 MSS51Q4VC12 460 aa12.48□□□□□ -0.41
VNN3-214ENST00000580813 PKDCCQ504Y2 493 aa12.48□□□□□ -0.41
VNN3-214ENST00000580813 HLA-CQ95604 372 aa12.48□□□□□ -0.41
VNN3-214ENST00000580813 FAM217BQ9NTX9 383 aaPredicted RBP12.48□□□□□ -0.41
VNN3-214ENST00000580813 GDF9O60383 454 aa12.47□□□□□ -0.41
VNN3-214ENST00000580813 USP46P62068 366 aa12.47□□□□□ -0.41
VNN3-214ENST00000580813 FOXC1Q12948 553 aa12.47□□□□□ -0.41
VNN3-214ENST00000580813 RPIAP49247 311 aa12.46□□□□□ -0.41
VNN3-214ENST00000580813 CD2BP2O95400 341 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms