RNA–Protein interactions for RNA: ENST00000580574.1

CCDC144CP-203, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 3

Gene CCDC144CP, Length 896 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-203ENST00000580574 TONSLQ96HA7 1378 aa18.78■□□□□ 0.6
CCDC144CP-203ENST00000580574 ERVK-7P63135 1459 aa18.77■□□□□ 0.6
CCDC144CP-203ENST00000580574 MADDQ8WXG6 1647 aa18.77■□□□□ 0.6
CCDC144CP-203ENST00000580574 RBM42Q9BTD8 480 aaKnown RBP18.76■□□□□ 0.59
CCDC144CP-203ENST00000580574 PPP1R15AO75807 674 aaPredicted RBP18.75■□□□□ 0.59
CCDC144CP-203ENST00000580574 L3MBTL2Q969R5 705 aa18.75■□□□□ 0.59
CCDC144CP-203ENST00000580574 FBXO31Q5XUX0 539 aaPredicted RBP18.73■□□□□ 0.59
CCDC144CP-203ENST00000580574 IFT172Q9UG01 1749 aa18.73■□□□□ 0.59
CCDC144CP-203ENST00000580574 RIMS1Q86UR5 1692 aaKnown RBP18.73■□□□□ 0.59
CCDC144CP-203ENST00000580574 ADGRB3O60242 1522 aa18.72■□□□□ 0.59
CCDC144CP-203ENST00000580574 MYO5BQ9ULV0 1848 aa18.72■□□□□ 0.59
CCDC144CP-203ENST00000580574 ESF1Q9H501 851 aaKnown RBP18.7■□□□□ 0.58
CCDC144CP-203ENST00000580574 TMEM131LA2VDJ0 1609 aa18.69■□□□□ 0.58
CCDC144CP-203ENST00000580574 SLC52A1Q9NWF4 448 aa18.68■□□□□ 0.58
CCDC144CP-203ENST00000580574 PPLO60437 1756 aa18.67■□□□□ 0.58
CCDC144CP-203ENST00000580574 UHRF1BP1Q6BDS2 1440 aa18.66■□□□□ 0.58
CCDC144CP-203ENST00000580574 IDI1Q13907 227 aa18.66■□□□□ 0.58
CCDC144CP-203ENST00000580574 KDM5AP29375 1690 aaKnown RBP18.66■□□□□ 0.58
CCDC144CP-203ENST00000580574 CEBPAP49715 358 aaPredicted RBP18.63■□□□□ 0.57
CCDC144CP-203ENST00000580574 NBPF8Q3BBV2 869 aa18.63■□□□□ 0.57
CCDC144CP-203ENST00000580574 RGL3Q3MIN7 710 aa18.63■□□□□ 0.57
CCDC144CP-203ENST00000580574 ATXN8OSP0DMR3 200 aa18.62■□□□□ 0.57
CCDC144CP-203ENST00000580574 TNRQ92752 1358 aa18.62■□□□□ 0.57
CCDC144CP-203ENST00000580574 UBR1Q8IWV7 1749 aa18.61■□□□□ 0.57
CCDC144CP-203ENST00000580574 TRPM1Q7Z4N2 1603 aa18.6■□□□□ 0.57
CCDC144CP-203ENST00000580574 NEXMIFQ5QGS0 1516 aa18.6■□□□□ 0.57
CCDC144CP-203ENST00000580574 DCAF11Q8TEB1 546 aa18.6■□□□□ 0.57
CCDC144CP-203ENST00000580574 MYOM2P54296 1465 aa18.59■□□□□ 0.57
CCDC144CP-203ENST00000580574 PRAG1Q86YV5 1406 aa18.59■□□□□ 0.57
CCDC144CP-203ENST00000580574 A2ML1A8K2U0 1454 aa18.58■□□□□ 0.57
CCDC144CP-203ENST00000580574 STAC3Q96MF2 364 aa18.58■□□□□ 0.56
CCDC144CP-203ENST00000580574 ZBTB12Q9Y330 459 aaPredicted RBP18.58■□□□□ 0.56
CCDC144CP-203ENST00000580574 MYO3AQ8NEV4 1616 aa18.58■□□□□ 0.56
CCDC144CP-203ENST00000580574 SETD1BQ9UPS6 1966 aaKnown RBP18.58■□□□□ 0.56
CCDC144CP-203ENST00000580574 NLRP1Q9C000 1473 aa18.58■□□□□ 0.56
CCDC144CP-203ENST00000580574 NRXN1Q9ULB1 1477 aa18.58■□□□□ 0.56
CCDC144CP-203ENST00000580574 RPGRIP1LQ68CZ1 1315 aa18.56■□□□□ 0.56
CCDC144CP-203ENST00000580574 KIAA1210Q9ULL0 1709 aa18.56■□□□□ 0.56
CCDC144CP-203ENST00000580574 PTPRMP28827 1452 aa18.56■□□□□ 0.56
CCDC144CP-203ENST00000580574 RALGAPBQ86X10 1494 aa18.55■□□□□ 0.56
CCDC144CP-203ENST00000580574 KDM2AQ9Y2K7 1162 aa18.55■□□□□ 0.56
CCDC144CP-203ENST00000580574 CHGAP10645 457 aaKnown RBP18.54■□□□□ 0.56
CCDC144CP-203ENST00000580574 ZNF142P52746 1687 aaPredicted RBP18.54■□□□□ 0.56
CCDC144CP-203ENST00000580574 ZFYVE9O95405 1425 aa18.53■□□□□ 0.56
CCDC144CP-203ENST00000580574 LAMC1P11047 1609 aa18.51■□□□□ 0.55
CCDC144CP-203ENST00000580574 ADGRF5Q8IZF2 1346 aa18.5■□□□□ 0.55
CCDC144CP-203ENST00000580574 ZNF326Q5BKZ1 582 aaKnown RBP18.5■□□□□ 0.55
CCDC144CP-203ENST00000580574 CEP170BQ9Y4F5 1589 aaPredicted RBP18.5■□□□□ 0.55
CCDC144CP-203ENST00000580574 KDM4FA0A1W2PPD8 638 aa18.49■□□□□ 0.55
CCDC144CP-203ENST00000580574 PIK3C2GO75747 1445 aa18.49■□□□□ 0.55
CCDC144CP-203ENST00000580574 GPRASP1Q5JY77 1395 aa18.48■□□□□ 0.55
CCDC144CP-203ENST00000580574 SLIT1O75093 1534 aa18.47■□□□□ 0.55
CCDC144CP-203ENST00000580574 RIMS2Q9UQ26 1411 aa18.47■□□□□ 0.55
CCDC144CP-203ENST00000580574 ARHGAP23Q9P227 1491 aa18.46■□□□□ 0.55
CCDC144CP-203ENST00000580574 VGFO15240 615 aaPredicted RBP18.45■□□□□ 0.54
CCDC144CP-203ENST00000580574 TMEM2Q9UHN6 1383 aa18.44■□□□□ 0.54
CCDC144CP-203ENST00000580574 SETD1AO15047 1707 aaKnown RBP18.44■□□□□ 0.54
CCDC144CP-203ENST00000580574 STAG3Q9UJ98 1225 aa18.44■□□□□ 0.54
CCDC144CP-203ENST00000580574 IQGAP1P46940 1657 aa18.44■□□□□ 0.54
CCDC144CP-203ENST00000580574 SETBP1Q9Y6X0 1596 aa18.43■□□□□ 0.54
CCDC144CP-203ENST00000580574 NRXN3Q9Y4C0 1643 aa18.43■□□□□ 0.54
CCDC144CP-203ENST00000580574 NBPF1Q3BBV0 1214 aa18.43■□□□□ 0.54
CCDC144CP-203ENST00000580574 C14orf93Q9H972 538 aaKnown RBP18.42■□□□□ 0.54
CCDC144CP-203ENST00000580574 ADGRB1O14514 1584 aa18.41■□□□□ 0.54
CCDC144CP-203ENST00000580574 CFAP70Q5T0N1 1121 aa18.4■□□□□ 0.54
CCDC144CP-203ENST00000580574 NUTM2DQ5VT03 806 aaPredicted RBP18.4■□□□□ 0.54
CCDC144CP-203ENST00000580574 ROCK2O75116 1388 aaKnown RBP18.4■□□□□ 0.54
CCDC144CP-203ENST00000580574 ZNF316A6NFI3 1004 aaPredicted RBP18.39■□□□□ 0.53
CCDC144CP-203ENST00000580574 AKT1S1Q96B36 256 aa18.39■□□□□ 0.53
CCDC144CP-203ENST00000580574 ALKQ9UM73 1620 aa18.38■□□□□ 0.53
CCDC144CP-203ENST00000580574 CHRDL2Q6WN34 429 aa18.38■□□□□ 0.53
CCDC144CP-203ENST00000580574 THEMISQ8N1K5 641 aaPredicted RBP18.38■□□□□ 0.53
CCDC144CP-203ENST00000580574 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.38■□□□□ 0.53
CCDC144CP-203ENST00000580574 ASXL1Q8IXJ9 1541 aa18.38■□□□□ 0.53
CCDC144CP-203ENST00000580574 CARD11Q9BXL7 1154 aa18.37■□□□□ 0.53
CCDC144CP-203ENST00000580574 HSPA5P11021 654 aaKnown RBP18.36■□□□□ 0.53
CCDC144CP-203ENST00000580574 LTKP29376 864 aa18.36■□□□□ 0.53
CCDC144CP-203ENST00000580574 EIF4G2P78344 907 aaKnown RBP eCLIP18.36■□□□□ 0.53
CCDC144CP-203ENST00000580574 USP47Q96K76 1375 aa18.36■□□□□ 0.53
CCDC144CP-203ENST00000580574 POLR1AO95602 1720 aaPredicted RBP18.35■□□□□ 0.53
CCDC144CP-203ENST00000580574 HDGFP51858 240 aaKnown RBP18.35■□□□□ 0.53
CCDC144CP-203ENST00000580574 PLEKHG1Q9ULL1 1385 aa18.33■□□□□ 0.53
CCDC144CP-203ENST00000580574 MED14O60244 1454 aa18.33■□□□□ 0.52
CCDC144CP-203ENST00000580574 SCAF11Q99590 1463 aaKnown RBP18.33■□□□□ 0.52
CCDC144CP-203ENST00000580574 HIRIP3Q9BW71 556 aaPredicted RBP18.32■□□□□ 0.52
CCDC144CP-203ENST00000580574 ADAMTS13Q76LX8 1427 aa18.32■□□□□ 0.52
CCDC144CP-203ENST00000580574 TXNDC2Q86VQ3 553 aa18.31■□□□□ 0.52
CCDC144CP-203ENST00000580574 ARHGEF28Q8N1W1 1705 aaKnown RBP18.31■□□□□ 0.52
CCDC144CP-203ENST00000580574 TMEM132EQ6IEE7 984 aa18.28■□□□□ 0.52
CCDC144CP-203ENST00000580574 EID1Q9Y6B2 187 aa18.28■□□□□ 0.52
CCDC144CP-203ENST00000580574 KNDC1Q76NI1 1749 aa18.27■□□□□ 0.52
CCDC144CP-203ENST00000580574 DIP2AQ14689 1571 aa18.27■□□□□ 0.52
CCDC144CP-203ENST00000580574 ST20-MTHFSA0A0A6YYL1 179 aa18.26■□□□□ 0.51
CCDC144CP-203ENST00000580574 LMTK3Q96Q04 1460 aa18.26■□□□□ 0.51
CCDC144CP-203ENST00000580574 YTHDC2Q9H6S0 1430 aaKnown RBP18.25■□□□□ 0.51
CCDC144CP-203ENST00000580574 C11orf95C9JLR9 678 aaPredicted RBP18.24■□□□□ 0.51
CCDC144CP-203ENST00000580574 ANKLE2Q86XL3 938 aa18.24■□□□□ 0.51
CCDC144CP-203ENST00000580574 REM2Q8IYK8 340 aaPredicted RBP18.24■□□□□ 0.51
CCDC144CP-203ENST00000580574 TESK2Q96S53 571 aa18.24■□□□□ 0.51
CCDC144CP-203ENST00000580574 METP08581 1390 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms