RNA–Protein interactions for RNA: ENST00000580248.5

TMCO1-207, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 2 BASIC

Gene TMCO1, Length 1,735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-207ENST00000580248 RIMS1Q86UR5 1692 aaKnown RBP24.19■■□□□ 1.46
TMCO1-207ENST00000580248 CEBPAP49715 358 aaPredicted RBP24.19■■□□□ 1.46
TMCO1-207ENST00000580248 PRKRIP1Q9H875 184 aaPredicted RBP24.18■■□□□ 1.46
TMCO1-207ENST00000580248 IDI1Q13907 227 aa24.17■■□□□ 1.46
TMCO1-207ENST00000580248 GPRASP1Q5JY77 1395 aa24.17■■□□□ 1.46
TMCO1-207ENST00000580248 NEURL4Q96JN8 1562 aa24.16■■□□□ 1.46
TMCO1-207ENST00000580248 STAC3Q96MF2 364 aa24.15■■□□□ 1.46
TMCO1-207ENST00000580248 KIF1BO60333 1816 aa24.15■■□□□ 1.46
TMCO1-207ENST00000580248 RGL3Q3MIN7 710 aa24.15■■□□□ 1.46
TMCO1-207ENST00000580248 TNRQ92752 1358 aa24.15■■□□□ 1.46
TMCO1-207ENST00000580248 PLPPR3Q6T4P5 718 aa24.11■■□□□ 1.45
TMCO1-207ENST00000580248 CHGAP10645 457 aaKnown RBP24.1■■□□□ 1.45
TMCO1-207ENST00000580248 ADGRB3O60242 1522 aa24.1■■□□□ 1.45
TMCO1-207ENST00000580248 ST20-MTHFSA0A0A6YYL1 179 aa24.08■■□□□ 1.45
TMCO1-207ENST00000580248 PTPRMP28827 1452 aa24.07■■□□□ 1.44
TMCO1-207ENST00000580248 TMEM131LA2VDJ0 1609 aa24.06■■□□□ 1.44
TMCO1-207ENST00000580248 NLRP1Q9C000 1473 aa24.05■■□□□ 1.44
TMCO1-207ENST00000580248 STAG3Q9UJ98 1225 aa24.04■■□□□ 1.44
TMCO1-207ENST00000580248 RPGRIP1LQ68CZ1 1315 aa24.03■■□□□ 1.44
TMCO1-207ENST00000580248 KDM4FA0A1W2PPD8 638 aa24.02■■□□□ 1.44
TMCO1-207ENST00000580248 SUPT16HQ9Y5B9 1047 aaKnown RBP24.01■■□□□ 1.43
TMCO1-207ENST00000580248 KTN1Q86UP2 1357 aaKnown RBP24.01■■□□□ 1.43
TMCO1-207ENST00000580248 A2ML1A8K2U0 1454 aa24■■□□□ 1.43
TMCO1-207ENST00000580248 PELP1Q8IZL8 1130 aaKnown RBP23.99■■□□□ 1.43
TMCO1-207ENST00000580248 MRS2Q9HD23 443 aa23.99■■□□□ 1.43
TMCO1-207ENST00000580248 MYO5BQ9ULV0 1848 aa23.99■■□□□ 1.43
TMCO1-207ENST00000580248 KDM5AP29375 1690 aaKnown RBP23.99■■□□□ 1.43
TMCO1-207ENST00000580248 NBPF1Q3BBV0 1214 aa23.98■■□□□ 1.43
TMCO1-207ENST00000580248 POLR3GLQ9BT43 218 aa23.98■■□□□ 1.43
TMCO1-207ENST00000580248 IFT172Q9UG01 1749 aa23.97■■□□□ 1.43
TMCO1-207ENST00000580248 HNRNPUQ00839 825 aaKnown RBP eCLIP23.97■■□□□ 1.43
TMCO1-207ENST00000580248 MYO3AQ8NEV4 1616 aa23.97■■□□□ 1.43
TMCO1-207ENST00000580248 UBR1Q8IWV7 1749 aa23.96■■□□□ 1.43
TMCO1-207ENST00000580248 KIAA1210Q9ULL0 1709 aa23.96■■□□□ 1.43
TMCO1-207ENST00000580248 PPLO60437 1756 aa23.96■■□□□ 1.43
TMCO1-207ENST00000580248 MYOM2P54296 1465 aa23.95■■□□□ 1.42
TMCO1-207ENST00000580248 SETD1BQ9UPS6 1966 aaKnown RBP23.95■■□□□ 1.42
TMCO1-207ENST00000580248 NEXMIFQ5QGS0 1516 aa23.95■■□□□ 1.42
TMCO1-207ENST00000580248 CCDC184Q52MB2 194 aa23.93■■□□□ 1.42
TMCO1-207ENST00000580248 VGFO15240 615 aaPredicted RBP23.93■■□□□ 1.42
TMCO1-207ENST00000580248 IQGAP1P46940 1657 aa23.92■■□□□ 1.42
TMCO1-207ENST00000580248 ADGRF5Q8IZF2 1346 aa23.91■■□□□ 1.42
TMCO1-207ENST00000580248 ZFYVE9O95405 1425 aa23.91■■□□□ 1.42
TMCO1-207ENST00000580248 CEP170BQ9Y4F5 1589 aaPredicted RBP23.9■■□□□ 1.42
TMCO1-207ENST00000580248 THEMISQ8N1K5 641 aaPredicted RBP23.9■■□□□ 1.42
TMCO1-207ENST00000580248 TESK2Q96S53 571 aa23.9■■□□□ 1.42
TMCO1-207ENST00000580248 NRXN1Q9ULB1 1477 aa23.9■■□□□ 1.42
TMCO1-207ENST00000580248 RIMS2Q9UQ26 1411 aa23.89■■□□□ 1.42
TMCO1-207ENST00000580248 RALBP1Q15311 655 aa23.89■■□□□ 1.41
TMCO1-207ENST00000580248 TMEM2Q9UHN6 1383 aa23.89■■□□□ 1.41
TMCO1-207ENST00000580248 NEFLP07196 543 aa23.88■■□□□ 1.41
TMCO1-207ENST00000580248 TMF1P82094 1093 aa23.88■■□□□ 1.41
TMCO1-207ENST00000580248 NUTM2DQ5VT03 806 aaPredicted RBP23.88■■□□□ 1.41
TMCO1-207ENST00000580248 HDGFP51858 240 aaKnown RBP23.87■■□□□ 1.41
TMCO1-207ENST00000580248 ZNF142P52746 1687 aaPredicted RBP23.87■■□□□ 1.41
TMCO1-207ENST00000580248 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.87■■□□□ 1.41
TMCO1-207ENST00000580248 FAM9BQ8IZU0 186 aa23.86■■□□□ 1.41
TMCO1-207ENST00000580248 SCAF11Q99590 1463 aaKnown RBP23.86■■□□□ 1.41
TMCO1-207ENST00000580248 ZBED9Q6R2W3 1325 aa23.85■■□□□ 1.41
TMCO1-207ENST00000580248 PIK3C2GO75747 1445 aa23.84■■□□□ 1.41
TMCO1-207ENST00000580248 SLIT1O75093 1534 aa23.83■■□□□ 1.41
TMCO1-207ENST00000580248 ARHGAP23Q9P227 1491 aa23.82■■□□□ 1.4
TMCO1-207ENST00000580248 SLC24A1O60721 1099 aa23.81■■□□□ 1.4
TMCO1-207ENST00000580248 MYBBP1AQ9BQG0 1328 aaKnown RBP23.81■■□□□ 1.4
TMCO1-207ENST00000580248 BRD4O60885 1362 aaPredicted RBP23.81■■□□□ 1.4
TMCO1-207ENST00000580248 EIF3AQ14152 1382 aaKnown RBP23.81■■□□□ 1.4
TMCO1-207ENST00000580248 DISP3Q9P2K9 1392 aa23.81■■□□□ 1.4
TMCO1-207ENST00000580248 CDCA8Q53HL2 280 aa23.8■■□□□ 1.4
TMCO1-207ENST00000580248 CFAP70Q5T0N1 1121 aa23.79■■□□□ 1.4
TMCO1-207ENST00000580248 C14orf93Q9H972 538 aaKnown RBP23.79■■□□□ 1.4
TMCO1-207ENST00000580248 EID1Q9Y6B2 187 aa23.79■■□□□ 1.4
TMCO1-207ENST00000580248 FKBP8Q14318 412 aa23.79■■□□□ 1.4
TMCO1-207ENST00000580248 TXNDC2Q86VQ3 553 aa23.79■■□□□ 1.4
TMCO1-207ENST00000580248 LTKP29376 864 aa23.78■■□□□ 1.4
TMCO1-207ENST00000580248 PER1O15534 1290 aaPredicted RBP23.76■■□□□ 1.39
TMCO1-207ENST00000580248 TMC1Q8TDI8 760 aa23.76■■□□□ 1.39
TMCO1-207ENST00000580248 PARD3Q8TEW0 1356 aa23.76■■□□□ 1.39
TMCO1-207ENST00000580248 PNISRQ8TF01 805 aaKnown RBP23.74■■□□□ 1.39
TMCO1-207ENST00000580248 PLEKHG1Q9ULL1 1385 aa23.73■■□□□ 1.39
TMCO1-207ENST00000580248 ANKLE2Q86XL3 938 aa23.72■■□□□ 1.39
TMCO1-207ENST00000580248 SENP3Q9H4L4 574 aaPredicted RBP23.72■■□□□ 1.39
TMCO1-207ENST00000580248 SETBP1Q9Y6X0 1596 aa23.72■■□□□ 1.39
TMCO1-207ENST00000580248 NLRP13Q86W25 1043 aa23.7■■□□□ 1.39
TMCO1-207ENST00000580248 ALKQ9UM73 1620 aa23.7■■□□□ 1.38
TMCO1-207ENST00000580248 LRPPRCP42704 1394 aaKnown RBP23.7■■□□□ 1.38
TMCO1-207ENST00000580248 NRXN3Q9Y4C0 1643 aa23.68■■□□□ 1.38
TMCO1-207ENST00000580248 BCANQ96GW7 911 aa23.68■■□□□ 1.38
TMCO1-207ENST00000580248 PANK3Q9H999 370 aa23.68■■□□□ 1.38
TMCO1-207ENST00000580248 ADGRB1O14514 1584 aa23.68■■□□□ 1.38
TMCO1-207ENST00000580248 ERICH6BQ5W0A0 696 aa23.67■■□□□ 1.38
TMCO1-207ENST00000580248 CNGB1Q14028 1251 aaPredicted RBP23.66■■□□□ 1.38
TMCO1-207ENST00000580248 TMEM132EQ6IEE7 984 aa23.66■■□□□ 1.38
TMCO1-207ENST00000580248 LMTK3Q96Q04 1460 aa23.66■■□□□ 1.38
TMCO1-207ENST00000580248 INSRP06213 1382 aa23.65■■□□□ 1.38
TMCO1-207ENST00000580248 ADAMTS13Q76LX8 1427 aa23.64■■□□□ 1.38
TMCO1-207ENST00000580248 SBNO2Q9Y2G9 1366 aa23.63■■□□□ 1.37
TMCO1-207ENST00000580248 SETD1AO15047 1707 aaKnown RBP23.63■■□□□ 1.37
TMCO1-207ENST00000580248 ASXL1Q8IXJ9 1541 aa23.62■■□□□ 1.37
TMCO1-207ENST00000580248 SMG6Q86US8 1419 aaKnown RBP23.62■■□□□ 1.37
TMCO1-207ENST00000580248 MED14O60244 1454 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms