RNA–Protein interactions for RNA: ENST00000578887.1

RBFOX3-201, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 2,694 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-201ENST00000578887 KDM5DQ9BY66 1539 aa18.28■□□□□ 0.52
RBFOX3-201ENST00000578887 BLMP54132 1417 aaPredicted RBP18.27■□□□□ 0.52
RBFOX3-201ENST00000578887 PLEKHH1Q9ULM0 1364 aa18.27■□□□□ 0.52
RBFOX3-201ENST00000578887 C8orf34Q49A92 452 aa18.27■□□□□ 0.52
RBFOX3-201ENST00000578887 RGS3P49796 1198 aa18.26■□□□□ 0.51
RBFOX3-201ENST00000578887 PLEKHH2Q8IVE3 1493 aa18.26■□□□□ 0.51
RBFOX3-201ENST00000578887 RIMBP3CA6NJZ7 1639 aa18.26■□□□□ 0.51
RBFOX3-201ENST00000578887 RIMBP3BA6NNM3 1639 aa18.26■□□□□ 0.51
RBFOX3-201ENST00000578887 RIMBP3Q9UFD9 1639 aa18.26■□□□□ 0.51
RBFOX3-201ENST00000578887 ABCC1P33527 1531 aa18.26■□□□□ 0.51
RBFOX3-201ENST00000578887 HAP1P54257 671 aaPredicted RBP18.25■□□□□ 0.51
RBFOX3-201ENST00000578887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.25■□□□□ 0.51
RBFOX3-201ENST00000578887 RSPH4AQ5TD94 716 aa18.25■□□□□ 0.51
RBFOX3-201ENST00000578887 CYB5RLQ6IPT4 315 aa18.25■□□□□ 0.51
RBFOX3-201ENST00000578887 DDRGK1Q96HY6 314 aa18.25■□□□□ 0.51
RBFOX3-201ENST00000578887 FRAT2O75474 233 aaPredicted RBP18.24■□□□□ 0.51
RBFOX3-201ENST00000578887 DUSP27Q5VZP5 1158 aa18.24■□□□□ 0.51
RBFOX3-201ENST00000578887 TRPM1Q7Z4N2 1603 aa18.23■□□□□ 0.51
RBFOX3-201ENST00000578887 ARAP3Q8WWN8 1544 aa18.23■□□□□ 0.51
RBFOX3-201ENST00000578887 MAST1Q9Y2H9 1570 aa18.22■□□□□ 0.51
RBFOX3-201ENST00000578887 TRAPPC8Q9Y2L5 1435 aa18.22■□□□□ 0.51
RBFOX3-201ENST00000578887 COL17A1Q9UMD9 1497 aaPredicted RBP18.22■□□□□ 0.51
RBFOX3-201ENST00000578887 PLA2R1Q13018 1463 aa18.21■□□□□ 0.51
RBFOX3-201ENST00000578887 FANCAO15360 1455 aa18.21■□□□□ 0.51
RBFOX3-201ENST00000578887 ZMYM4Q5VZL5 1548 aa18.2■□□□□ 0.5
RBFOX3-201ENST00000578887 SPINK5Q9NQ38 1064 aaPredicted RBP18.2■□□□□ 0.5
RBFOX3-201ENST00000578887 A2MP01023 1474 aa18.2■□□□□ 0.5
RBFOX3-201ENST00000578887 CCDC144AA2RUR9 1427 aa18.2■□□□□ 0.5
RBFOX3-201ENST00000578887 FAM135AQ9P2D6 1515 aa18.19■□□□□ 0.5
RBFOX3-201ENST00000578887 FAM161AQ3B820 660 aa18.19■□□□□ 0.5
RBFOX3-201ENST00000578887 CENPQQ7L2Z9 268 aaPredicted RBP18.18■□□□□ 0.5
RBFOX3-201ENST00000578887 CCDC146Q8IYE0 955 aa18.18■□□□□ 0.5
RBFOX3-201ENST00000578887 ERBINQ96RT1 1412 aa18.18■□□□□ 0.5
RBFOX3-201ENST00000578887 AFAP1Q8N556 730 aa18.17■□□□□ 0.5
RBFOX3-201ENST00000578887 PLXNC1O60486 1568 aa18.17■□□□□ 0.5
RBFOX3-201ENST00000578887 PPP2R1AP30153 589 aa18.16■□□□□ 0.5
RBFOX3-201ENST00000578887 MAGI2Q86UL8 1455 aa18.15■□□□□ 0.5
RBFOX3-201ENST00000578887 GPRASP1Q5JY77 1395 aa18.15■□□□□ 0.5
RBFOX3-201ENST00000578887 BCAR3O75815 825 aa18.15■□□□□ 0.5
RBFOX3-201ENST00000578887 DMRT2Q9Y5R5 561 aa18.14■□□□□ 0.49
RBFOX3-201ENST00000578887 ZNF521Q96K83 1311 aa18.14■□□□□ 0.49
RBFOX3-201ENST00000578887 ADGRL1O94910 1474 aa18.14■□□□□ 0.49
RBFOX3-201ENST00000578887 TMF1P82094 1093 aa18.13■□□□□ 0.49
RBFOX3-201ENST00000578887 SEC24BO95487 1268 aa18.13■□□□□ 0.49
RBFOX3-201ENST00000578887 CD109Q6YHK3 1445 aa18.12■□□□□ 0.49
RBFOX3-201ENST00000578887 IGHDP01880 384 aa18.12■□□□□ 0.49
RBFOX3-201ENST00000578887 SCAPERQ9BY12 1400 aa18.12■□□□□ 0.49
RBFOX3-201ENST00000578887 GOLGA2Q08379 1002 aa18.12■□□□□ 0.49
RBFOX3-201ENST00000578887 WDR43Q15061 677 aaKnown RBP eCLIP18.12■□□□□ 0.49
RBFOX3-201ENST00000578887 SPAG9O60271 1321 aaKnown RBP18.12■□□□□ 0.49
RBFOX3-201ENST00000578887 PRDM15P57071 1507 aaPredicted RBP18.12■□□□□ 0.49
RBFOX3-201ENST00000578887 ZFYVE16Q7Z3T8 1539 aa18.1■□□□□ 0.49
RBFOX3-201ENST00000578887 USP19O94966 1318 aa18.1■□□□□ 0.49
RBFOX3-201ENST00000578887 DUOX2Q9NRD8 1548 aa18.1■□□□□ 0.49
RBFOX3-201ENST00000578887 SLFN5Q08AF3 891 aa18.09■□□□□ 0.49
RBFOX3-201ENST00000578887 APAF1O14727 1248 aa18.08■□□□□ 0.49
RBFOX3-201ENST00000578887 KNSTRNQ9Y448 316 aa18.08■□□□□ 0.49
RBFOX3-201ENST00000578887 INSRP06213 1382 aa18.08■□□□□ 0.48
RBFOX3-201ENST00000578887 POGKQ9P215 609 aa18.07■□□□□ 0.48
RBFOX3-201ENST00000578887 UNC13BO14795 1591 aa18.07■□□□□ 0.48
RBFOX3-201ENST00000578887 TMEM132AQ24JP5 1023 aa18.06■□□□□ 0.48
RBFOX3-201ENST00000578887 INO80Q9ULG1 1556 aaPredicted RBP18.06■□□□□ 0.48
RBFOX3-201ENST00000578887 ATP7AQ04656 1500 aa18.06■□□□□ 0.48
RBFOX3-201ENST00000578887 RTEL1-TNFRSF6BF6WH68 1400 aa18.05■□□□□ 0.48
RBFOX3-201ENST00000578887 SLKQ9H2G2 1235 aaPredicted RBP18.04■□□□□ 0.48
RBFOX3-201ENST00000578887 CFAP74Q9C0B2 1584 aa18.03■□□□□ 0.48
RBFOX3-201ENST00000578887 TRMT2AQ8IZ69 625 aaKnown RBP18.03■□□□□ 0.48
RBFOX3-201ENST00000578887 PANK1Q8TE04 598 aa18.03■□□□□ 0.48
RBFOX3-201ENST00000578887 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.01■□□□□ 0.47
RBFOX3-201ENST00000578887 COG6Q9Y2V7 657 aa18.01■□□□□ 0.47
RBFOX3-201ENST00000578887 MAP3K4Q9Y6R4 1608 aa18.01■□□□□ 0.47
RBFOX3-201ENST00000578887 KIDINS220Q9ULH0 1771 aa18.01■□□□□ 0.47
RBFOX3-201ENST00000578887 IQGAP3Q86VI3 1631 aa18■□□□□ 0.47
RBFOX3-201ENST00000578887 TNNQ9UQP3 1299 aa17.99■□□□□ 0.47
RBFOX3-201ENST00000578887 ZNF518AQ6AHZ1 1483 aa17.99■□□□□ 0.47
RBFOX3-201ENST00000578887 POGZQ7Z3K3 1410 aa17.98■□□□□ 0.47
RBFOX3-201ENST00000578887 LAMC1P11047 1609 aa17.97■□□□□ 0.47
RBFOX3-201ENST00000578887 EIF3AQ14152 1382 aaKnown RBP17.96■□□□□ 0.47
RBFOX3-201ENST00000578887 DIP2BQ9P265 1576 aa17.96■□□□□ 0.47
RBFOX3-201ENST00000578887 NKTRP30414 1462 aaKnown RBP17.96■□□□□ 0.47
RBFOX3-201ENST00000578887 GLI2P10070 1586 aa17.96■□□□□ 0.47
RBFOX3-201ENST00000578887 FAM69CQ0P6D2 419 aa17.95■□□□□ 0.46
RBFOX3-201ENST00000578887 NEO1Q92859 1461 aa17.95■□□□□ 0.46
RBFOX3-201ENST00000578887 RAPGEF3O95398 923 aa17.95■□□□□ 0.46
RBFOX3-201ENST00000578887 NEUROD2Q15784 382 aa17.95■□□□□ 0.46
RBFOX3-201ENST00000578887 TSPOAP1O95153 1857 aa17.94■□□□□ 0.46
RBFOX3-201ENST00000578887 SPRYD3Q8NCJ5 442 aa17.94■□□□□ 0.46
RBFOX3-201ENST00000578887 RRP7AQ9Y3A4 280 aaKnown RBP17.93■□□□□ 0.46
RBFOX3-201ENST00000578887 DEPDC5O75140 1603 aa17.92■□□□□ 0.46
RBFOX3-201ENST00000578887 KIF3BO15066 747 aa17.92■□□□□ 0.46
RBFOX3-201ENST00000578887 CLUAP1Q96AJ1 413 aa17.92■□□□□ 0.46
RBFOX3-201ENST00000578887 BCL2L13Q9BXK5 485 aa17.92■□□□□ 0.46
RBFOX3-201ENST00000578887 RRAGDQ9NQL2 400 aaPredicted RBP17.92■□□□□ 0.46
RBFOX3-201ENST00000578887 NLRP1Q9C000 1473 aa17.92■□□□□ 0.46
RBFOX3-201ENST00000578887 HECW2Q9P2P5 1572 aa17.91■□□□□ 0.46
RBFOX3-201ENST00000578887 ASXL1Q8IXJ9 1541 aa17.91■□□□□ 0.46
RBFOX3-201ENST00000578887 RLBP1P12271 317 aa17.91■□□□□ 0.46
RBFOX3-201ENST00000578887 CARD14Q9BXL6 1004 aa17.91■□□□□ 0.46
RBFOX3-201ENST00000578887 RNF17Q9BXT8 1623 aaKnown RBP17.91■□□□□ 0.46
RBFOX3-201ENST00000578887 EIF2AK4Q9P2K8 1649 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms