RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 CEP162Q5TB80 1403 aa18.2■□□□□ 0.5
GGA3-206ENST00000578773 NUTM2DQ5VT03 806 aaPredicted RBP18.19■□□□□ 0.5
GGA3-206ENST00000578773 NHSL1Q5SYE7 1610 aa18.16■□□□□ 0.5
GGA3-206ENST00000578773 ADGRB3O60242 1522 aa18.16■□□□□ 0.5
GGA3-206ENST00000578773 ARHGAP31Q2M1Z3 1444 aa18.15■□□□□ 0.5
GGA3-206ENST00000578773 ZRANB1Q9UGI0 708 aa18.14■□□□□ 0.49
GGA3-206ENST00000578773 QTRT2Q9H974 415 aaKnown RBP18.13■□□□□ 0.49
GGA3-206ENST00000578773 GCC2Q8IWJ2 1684 aa18.12■□□□□ 0.49
GGA3-206ENST00000578773 IDI1Q13907 227 aa18.12■□□□□ 0.49
GGA3-206ENST00000578773 RBM6P78332 1123 aaKnown RBP18.11■□□□□ 0.49
GGA3-206ENST00000578773 C8orf37Q96NL8 207 aa18.11■□□□□ 0.49
GGA3-206ENST00000578773 STAG3Q9UJ98 1225 aa18.11■□□□□ 0.49
GGA3-206ENST00000578773 ASXL1Q8IXJ9 1541 aa18.1■□□□□ 0.49
GGA3-206ENST00000578773 ATAD2Q6PL18 1390 aa18.1■□□□□ 0.49
GGA3-206ENST00000578773 LRP5O75197 1615 aa18.09■□□□□ 0.49
GGA3-206ENST00000578773 BRINP3Q76B58 766 aa18.09■□□□□ 0.49
GGA3-206ENST00000578773 DUOX2Q9NRD8 1548 aa18.08■□□□□ 0.49
GGA3-206ENST00000578773 TSPY4P0CV99 314 aa18.08■□□□□ 0.48
GGA3-206ENST00000578773 TSPY10P0CW01 314 aa18.08■□□□□ 0.48
GGA3-206ENST00000578773 BCANQ96GW7 911 aa18.07■□□□□ 0.48
GGA3-206ENST00000578773 ZFYVE9O95405 1425 aa18.06■□□□□ 0.48
GGA3-206ENST00000578773 CROCC2H7BZ55 1655 aa18.06■□□□□ 0.48
GGA3-206ENST00000578773 RSPH4AQ5TD94 716 aa18.06■□□□□ 0.48
GGA3-206ENST00000578773 DDX17Q92841 729 aaKnown RBP18.06■□□□□ 0.48
GGA3-206ENST00000578773 SETD5Q9C0A6 1442 aa18.06■□□□□ 0.48
GGA3-206ENST00000578773 C14orf37Q86TY3 774 aa18.05■□□□□ 0.48
GGA3-206ENST00000578773 PNPLA6Q8IY17 1366 aa18.04■□□□□ 0.48
GGA3-206ENST00000578773 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.03■□□□□ 0.48
GGA3-206ENST00000578773 PLEKHG1Q9ULL1 1385 aa18.02■□□□□ 0.47
GGA3-206ENST00000578773 NOS1P29475 1434 aa18.01■□□□□ 0.47
GGA3-206ENST00000578773 BRWD3Q6RI45 1802 aa18.01■□□□□ 0.47
GGA3-206ENST00000578773 TMEM131LA2VDJ0 1609 aa18.01■□□□□ 0.47
GGA3-206ENST00000578773 NCOA3Q9Y6Q9 1424 aa18■□□□□ 0.47
GGA3-206ENST00000578773 ADAMTS2O95450 1211 aa18■□□□□ 0.47
GGA3-206ENST00000578773 ADAMTS13Q76LX8 1427 aa17.99■□□□□ 0.47
GGA3-206ENST00000578773 ATF3P18847 181 aa17.99■□□□□ 0.47
GGA3-206ENST00000578773 CADPS2Q86UW7 1296 aa17.99■□□□□ 0.47
GGA3-206ENST00000578773 MST1RQ04912 1400 aa17.98■□□□□ 0.47
GGA3-206ENST00000578773 PTPRUQ92729 1446 aa17.98■□□□□ 0.47
GGA3-206ENST00000578773 RIMS2Q9UQ26 1411 aa17.98■□□□□ 0.47
GGA3-206ENST00000578773 LMTK2Q8IWU2 1503 aa17.98■□□□□ 0.47
GGA3-206ENST00000578773 C19orf44Q9H6X5 657 aa17.98■□□□□ 0.47
GGA3-206ENST00000578773 KIF15Q9NS87 1388 aa17.97■□□□□ 0.47
GGA3-206ENST00000578773 ERBINQ96RT1 1412 aa17.96■□□□□ 0.47
GGA3-206ENST00000578773 NALCNQ8IZF0 1738 aa17.95■□□□□ 0.46
GGA3-206ENST00000578773 XRN1Q8IZH2 1706 aaKnown RBP17.95■□□□□ 0.46
GGA3-206ENST00000578773 MARF1Q9Y4F3 1742 aaKnown RBP17.95■□□□□ 0.46
GGA3-206ENST00000578773 NGLY1Q96IV0 654 aa17.95■□□□□ 0.46
GGA3-206ENST00000578773 ATRNO75882 1429 aa17.95■□□□□ 0.46
GGA3-206ENST00000578773 TRPM2O94759 1503 aa17.93■□□□□ 0.46
GGA3-206ENST00000578773 DEFB132Q7Z7B7 95 aa17.92■□□□□ 0.46
GGA3-206ENST00000578773 RRP7BPQ9NSQ0 103 aa17.92■□□□□ 0.46
GGA3-206ENST00000578773 USP21Q9UK80 565 aa17.92■□□□□ 0.46
GGA3-206ENST00000578773 NRXN3Q9Y4C0 1643 aa17.91■□□□□ 0.46
GGA3-206ENST00000578773 TBX22Q9Y458 520 aa17.91■□□□□ 0.46
GGA3-206ENST00000578773 UNC13BO14795 1591 aa17.91■□□□□ 0.46
GGA3-206ENST00000578773 PPP1R15AO75807 674 aaPredicted RBP17.9■□□□□ 0.46
GGA3-206ENST00000578773 LRRC59Q96AG4 307 aaKnown RBP17.9■□□□□ 0.46
GGA3-206ENST00000578773 LAMC1P11047 1609 aa17.9■□□□□ 0.46
GGA3-206ENST00000578773 DCCP43146 1447 aa17.89■□□□□ 0.45
GGA3-206ENST00000578773 FOXD1Q16676 465 aa17.88■□□□□ 0.45
GGA3-206ENST00000578773 TRPC5Q9UL62 973 aaPredicted RBP17.88■□□□□ 0.45
GGA3-206ENST00000578773 KANK1Q14678 1352 aa17.88■□□□□ 0.45
GGA3-206ENST00000578773 GLI3P10071 1580 aa17.87■□□□□ 0.45
GGA3-206ENST00000578773 COL22A1Q8NFW1 1626 aaPredicted RBP17.87■□□□□ 0.45
GGA3-206ENST00000578773 ABCC5O15440 1437 aa17.87■□□□□ 0.45
GGA3-206ENST00000578773 PSDA5PKW4 1024 aaPredicted RBP17.86■□□□□ 0.45
GGA3-206ENST00000578773 BCL9LQ86UU0 1499 aa17.85■□□□□ 0.45
GGA3-206ENST00000578773 AMOTL2Q9Y2J4 779 aa17.85■□□□□ 0.45
GGA3-206ENST00000578773 BLMP54132 1417 aaPredicted RBP17.84■□□□□ 0.45
GGA3-206ENST00000578773 MYOM3Q5VTT5 1437 aa17.84■□□□□ 0.45
GGA3-206ENST00000578773 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.84■□□□□ 0.45
GGA3-206ENST00000578773 CCDC125Q86Z20 511 aa17.83■□□□□ 0.44
GGA3-206ENST00000578773 FNBP4Q8N3X1 1017 aaPredicted RBP17.83■□□□□ 0.44
GGA3-206ENST00000578773 SLC52A1Q9NWF4 448 aa17.82■□□□□ 0.44
GGA3-206ENST00000578773 PIK3R4Q99570 1358 aa17.81■□□□□ 0.44
GGA3-206ENST00000578773 PTCH1Q13635 1447 aa17.81■□□□□ 0.44
GGA3-206ENST00000578773 PTPN23Q9H3S7 1636 aa17.8■□□□□ 0.44
GGA3-206ENST00000578773 SPHKAPQ2M3C7 1700 aa17.8■□□□□ 0.44
GGA3-206ENST00000578773 E9PCH4 1651 aa17.8■□□□□ 0.44
GGA3-206ENST00000578773 HRCP23327 699 aa17.79■□□□□ 0.44
GGA3-206ENST00000578773 MYOM2P54296 1465 aa17.78■□□□□ 0.44
GGA3-206ENST00000578773 CHGAP10645 457 aaKnown RBP17.78■□□□□ 0.44
GGA3-206ENST00000578773 DAPK1P53355 1430 aa17.78■□□□□ 0.44
GGA3-206ENST00000578773 ADGRL3Q9HAR2 1447 aa17.78■□□□□ 0.44
GGA3-206ENST00000578773 C1orf167Q5SNV9 1468 aa17.77■□□□□ 0.44
GGA3-206ENST00000578773 KANK4Q5T7N3 995 aaPredicted RBP17.77■□□□□ 0.44
GGA3-206ENST00000578773 RPRD2Q5VT52 1461 aaKnown RBP17.75■□□□□ 0.43
GGA3-206ENST00000578773 RALGAPBQ86X10 1494 aa17.75■□□□□ 0.43
GGA3-206ENST00000578773 CHIC2Q9UKJ5 165 aa17.75■□□□□ 0.43
GGA3-206ENST00000578773 SOS2Q07890 1332 aaPredicted RBP17.74■□□□□ 0.43
GGA3-206ENST00000578773 GJD4Q96KN9 370 aaPredicted RBP17.74■□□□□ 0.43
GGA3-206ENST00000578773 ORAI2Q96SN7 254 aa17.73■□□□□ 0.43
GGA3-206ENST00000578773 METP08581 1390 aa17.73■□□□□ 0.43
GGA3-206ENST00000578773 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.72■□□□□ 0.43
GGA3-206ENST00000578773 YY1P25490 414 aa17.71■□□□□ 0.43
GGA3-206ENST00000578773 HDGFP51858 240 aaKnown RBP17.7■□□□□ 0.42
GGA3-206ENST00000578773 PLCH1Q4KWH8 1693 aa17.68■□□□□ 0.42
GGA3-206ENST00000578773 IQGAP3Q86VI3 1631 aa17.68■□□□□ 0.42
GGA3-206ENST00000578773 TNS1Q9HBL0 1735 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms