RNA–Protein interactions for RNA: ENST00000578402.5

LIMD2-205, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-205ENST00000578402 FBXO31Q5XUX0 539 aaPredicted RBP32.15■■■□□ 2.74
LIMD2-205ENST00000578402 POLR1AO95602 1720 aaPredicted RBP32.13■■■□□ 2.73
LIMD2-205ENST00000578402 NEXMIFQ5QGS0 1516 aa32.11■■■□□ 2.73
LIMD2-205ENST00000578402 NBPF1Q3BBV0 1214 aa32.1■■■□□ 2.73
LIMD2-205ENST00000578402 ZFYVE9O95405 1425 aa32.07■■■□□ 2.72
LIMD2-205ENST00000578402 ADGRF5Q8IZF2 1346 aa32.06■■■□□ 2.72
LIMD2-205ENST00000578402 FER1L4A9Z1Z3 1794 aa32.06■■■□□ 2.72
LIMD2-205ENST00000578402 WASHC2AQ641Q2 1341 aa32.05■■■□□ 2.72
LIMD2-205ENST00000578402 PIK3C2GO75747 1445 aa32.05■■■□□ 2.72
LIMD2-205ENST00000578402 CCDC7Q96M83 1385 aa32.03■■■□□ 2.72
LIMD2-205ENST00000578402 MYO5BQ9ULV0 1848 aa32.03■■■□□ 2.72
LIMD2-205ENST00000578402 IQGAP1P46940 1657 aa32.03■■■□□ 2.72
LIMD2-205ENST00000578402 DDX10Q13206 875 aaKnown RBP32.03■■■□□ 2.72
LIMD2-205ENST00000578402 VGFO15240 615 aaPredicted RBP32.01■■■□□ 2.72
LIMD2-205ENST00000578402 SETBP1Q9Y6X0 1596 aa32.01■■■□□ 2.71
LIMD2-205ENST00000578402 TNRQ92752 1358 aa32■■■□□ 2.71
LIMD2-205ENST00000578402 KDM5AP29375 1690 aaKnown RBP32■■■□□ 2.71
LIMD2-205ENST00000578402 SCAF11Q99590 1463 aaKnown RBP31.99■■■□□ 2.71
LIMD2-205ENST00000578402 ST20-MTHFSA0A0A6YYL1 179 aa31.98■■■□□ 2.71
LIMD2-205ENST00000578402 A2ML1A8K2U0 1454 aa31.97■■■□□ 2.71
LIMD2-205ENST00000578402 C3P01024 1663 aa31.97■■■□□ 2.71
LIMD2-205ENST00000578402 C11orf95C9JLR9 678 aaPredicted RBP31.96■■■□□ 2.71
LIMD2-205ENST00000578402 KIF7Q2M1P5 1343 aa31.95■■■□□ 2.7
LIMD2-205ENST00000578402 STAG3Q9UJ98 1225 aa31.94■■■□□ 2.7
LIMD2-205ENST00000578402 CFAP70Q5T0N1 1121 aa31.93■■■□□ 2.7
LIMD2-205ENST00000578402 MIER1Q8N108 512 aa31.93■■■□□ 2.7
LIMD2-205ENST00000578402 C14orf93Q9H972 538 aaKnown RBP31.93■■■□□ 2.7
LIMD2-205ENST00000578402 NLRP1Q9C000 1473 aa31.92■■■□□ 2.7
LIMD2-205ENST00000578402 EIF3AQ14152 1382 aaKnown RBP31.91■■■□□ 2.7
LIMD2-205ENST00000578402 ADGRB1O14514 1584 aa31.88■■■□□ 2.69
LIMD2-205ENST00000578402 ADAMTSL3P82987 1691 aa31.85■■■□□ 2.69
LIMD2-205ENST00000578402 ILDR1Q86SU0 546 aaPredicted RBP31.85■■■□□ 2.69
LIMD2-205ENST00000578402 TESK2Q96S53 571 aa31.85■■■□□ 2.69
LIMD2-205ENST00000578402 UBR1Q8IWV7 1749 aa31.84■■■□□ 2.69
LIMD2-205ENST00000578402 RIMS2Q9UQ26 1411 aa31.84■■■□□ 2.69
LIMD2-205ENST00000578402 MYO3AQ8NEV4 1616 aa31.81■■■□□ 2.68
LIMD2-205ENST00000578402 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.8■■■□□ 2.68
LIMD2-205ENST00000578402 RIMS1Q86UR5 1692 aaKnown RBP31.79■■■□□ 2.68
LIMD2-205ENST00000578402 SLC24A1O60721 1099 aa31.79■■■□□ 2.68
LIMD2-205ENST00000578402 CEBPAP49715 358 aaPredicted RBP31.79■■■□□ 2.68
LIMD2-205ENST00000578402 NUTM2DQ5VT03 806 aaPredicted RBP31.77■■■□□ 2.68
LIMD2-205ENST00000578402 HDGFP51858 240 aaKnown RBP31.76■■■□□ 2.68
LIMD2-205ENST00000578402 TMF1P82094 1093 aa31.75■■■□□ 2.67
LIMD2-205ENST00000578402 TMEM2Q9UHN6 1383 aa31.73■■■□□ 2.67
LIMD2-205ENST00000578402 SBNO2Q9Y2G9 1366 aa31.73■■■□□ 2.67
LIMD2-205ENST00000578402 ALKQ9UM73 1620 aa31.72■■■□□ 2.67
LIMD2-205ENST00000578402 ANP32CO43423 234 aa31.71■■■□□ 2.67
LIMD2-205ENST00000578402 ASXL1Q8IXJ9 1541 aa31.71■■■□□ 2.67
LIMD2-205ENST00000578402 DISP3Q9P2K9 1392 aa31.7■■■□□ 2.67
LIMD2-205ENST00000578402 CDCA8Q53HL2 280 aa31.67■■■□□ 2.66
LIMD2-205ENST00000578402 SLIT1O75093 1534 aa31.66■■■□□ 2.66
LIMD2-205ENST00000578402 TMEM132EQ6IEE7 984 aa31.65■■■□□ 2.66
LIMD2-205ENST00000578402 SETD1AO15047 1707 aaKnown RBP31.65■■■□□ 2.66
LIMD2-205ENST00000578402 ARHGEF28Q8N1W1 1705 aaKnown RBP31.65■■■□□ 2.66
LIMD2-205ENST00000578402 POLR3GLQ9BT43 218 aa31.65■■■□□ 2.66
LIMD2-205ENST00000578402 CENPJQ9HC77 1338 aaPredicted RBP31.64■■■□□ 2.66
LIMD2-205ENST00000578402 ARHGAP23Q9P227 1491 aa31.64■■■□□ 2.66
LIMD2-205ENST00000578402 NRXN3Q9Y4C0 1643 aa31.64■■■□□ 2.66
LIMD2-205ENST00000578402 TRAK1Q9UPV9 953 aa31.61■■■□□ 2.65
LIMD2-205ENST00000578402 QRICH2Q9H0J4 1663 aa31.61■■■□□ 2.65
LIMD2-205ENST00000578402 CEP170BQ9Y4F5 1589 aaPredicted RBP31.6■■■□□ 2.65
LIMD2-205ENST00000578402 YTHDC2Q9H6S0 1430 aaKnown RBP31.6■■■□□ 2.65
LIMD2-205ENST00000578402 PTPRMP28827 1452 aa31.6■■■□□ 2.65
LIMD2-205ENST00000578402 ZNF142P52746 1687 aaPredicted RBP31.58■■■□□ 2.65
LIMD2-205ENST00000578402 CCER2I3L3R5 266 aa31.58■■■□□ 2.65
LIMD2-205ENST00000578402 THEMISQ8N1K5 641 aaPredicted RBP31.58■■■□□ 2.65
LIMD2-205ENST00000578402 PLEKHG1Q9ULL1 1385 aa31.57■■■□□ 2.64
LIMD2-205ENST00000578402 PLPPR3Q6T4P5 718 aa31.55■■■□□ 2.64
LIMD2-205ENST00000578402 DLC1Q96QB1 1528 aa31.55■■■□□ 2.64
LIMD2-205ENST00000578402 SETD1BQ9UPS6 1966 aaKnown RBP31.54■■■□□ 2.64
LIMD2-205ENST00000578402 EID1Q9Y6B2 187 aa31.53■■■□□ 2.64
LIMD2-205ENST00000578402 LRPPRCP42704 1394 aaKnown RBP31.52■■■□□ 2.64
LIMD2-205ENST00000578402 TXNDC2Q86VQ3 553 aa31.49■■■□□ 2.63
LIMD2-205ENST00000578402 ABCC11Q96J66 1382 aa31.48■■■□□ 2.63
LIMD2-205ENST00000578402 LTKP29376 864 aa31.48■■■□□ 2.63
LIMD2-205ENST00000578402 PRKRIP1Q9H875 184 aaPredicted RBP31.48■■■□□ 2.63
LIMD2-205ENST00000578402 ADAMTS13Q76LX8 1427 aa31.47■■■□□ 2.63
LIMD2-205ENST00000578402 KNDC1Q76NI1 1749 aa31.47■■■□□ 2.63
LIMD2-205ENST00000578402 MYOM1P52179 1685 aa31.46■■■□□ 2.63
LIMD2-205ENST00000578402 PUS7Q96PZ0 661 aaKnown RBP31.46■■■□□ 2.63
LIMD2-205ENST00000578402 MED14O60244 1454 aa31.45■■■□□ 2.63
LIMD2-205ENST00000578402 STK26Q9P289 416 aa31.44■■■□□ 2.62
LIMD2-205ENST00000578402 TECPR2O15040 1411 aa31.43■■■□□ 2.62
LIMD2-205ENST00000578402 DIP2AQ14689 1571 aa31.43■■■□□ 2.62
LIMD2-205ENST00000578402 METP08581 1390 aa31.43■■■□□ 2.62
LIMD2-205ENST00000578402 SENP3Q9H4L4 574 aaPredicted RBP31.43■■■□□ 2.62
LIMD2-205ENST00000578402 KTN1Q86UP2 1357 aaKnown RBP31.42■■■□□ 2.62
LIMD2-205ENST00000578402 SIRT1Q96EB6 747 aa31.4■■■□□ 2.62
LIMD2-205ENST00000578402 EVC2Q86UK5 1308 aa31.4■■■□□ 2.62
LIMD2-205ENST00000578402 TULP4Q9NRJ4 1543 aa31.4■■■□□ 2.62
LIMD2-205ENST00000578402 PER1O15534 1290 aaPredicted RBP31.39■■■□□ 2.61
LIMD2-205ENST00000578402 BCANQ96GW7 911 aa31.39■■■□□ 2.61
LIMD2-205ENST00000578402 PRAM1Q96QH2 718 aa31.39■■■□□ 2.61
LIMD2-205ENST00000578402 CPS1P31327 1500 aa31.39■■■□□ 2.61
LIMD2-205ENST00000578402 PANK3Q9H999 370 aa31.38■■■□□ 2.61
LIMD2-205ENST00000578402 FAM135BQ49AJ0 1406 aa31.37■■■□□ 2.61
LIMD2-205ENST00000578402 POGKQ9P215 609 aa31.37■■■□□ 2.61
LIMD2-205ENST00000578402 TBX22Q9Y458 520 aa31.34■■■□□ 2.61
LIMD2-205ENST00000578402 RALBP1Q15311 655 aa31.29■■■□□ 2.6
LIMD2-205ENST00000578402 ANKLE2Q86XL3 938 aa31.29■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms