RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 EFCAB6Q5THR3 1501 aa23.48■■□□□ 1.35
ERBB2-205ENST00000578199 AMER1Q5JTC6 1135 aaPredicted RBP23.47■■□□□ 1.35
ERBB2-205ENST00000578199 CCDC136Q96JN2 1154 aa23.46■■□□□ 1.35
ERBB2-205ENST00000578199 RAPGEF3O95398 923 aa23.45■■□□□ 1.34
ERBB2-205ENST00000578199 PPP2R1AP30153 589 aa23.45■■□□□ 1.34
ERBB2-205ENST00000578199 CDCA8Q53HL2 280 aa23.45■■□□□ 1.34
ERBB2-205ENST00000578199 ADAMTS8Q9UP79 889 aa23.45■■□□□ 1.34
ERBB2-205ENST00000578199 KIF1BO60333 1816 aa23.45■■□□□ 1.34
ERBB2-205ENST00000578199 MROH2AA6NES4 1674 aa23.45■■□□□ 1.34
ERBB2-205ENST00000578199 MAP3K4Q9Y6R4 1608 aa23.44■■□□□ 1.34
ERBB2-205ENST00000578199 ABCA6Q8N139 1617 aa23.43■■□□□ 1.34
ERBB2-205ENST00000578199 RCAN3Q9UKA8 241 aa23.43■■□□□ 1.34
ERBB2-205ENST00000578199 POGZQ7Z3K3 1410 aa23.43■■□□□ 1.34
ERBB2-205ENST00000578199 EIF3AQ14152 1382 aaKnown RBP23.42■■□□□ 1.34
ERBB2-205ENST00000578199 RRP1P56182 461 aaKnown RBP23.41■■□□□ 1.34
ERBB2-205ENST00000578199 FRMPD1Q5SYB0 1578 aa23.4■■□□□ 1.34
ERBB2-205ENST00000578199 MSH5O43196 834 aa23.39■■□□□ 1.34
ERBB2-205ENST00000578199 ANP32EQ9BTT0 268 aa23.39■■□□□ 1.34
ERBB2-205ENST00000578199 NOS1P29475 1434 aa23.39■■□□□ 1.34
ERBB2-205ENST00000578199 BLMP54132 1417 aaPredicted RBP23.39■■□□□ 1.34
ERBB2-205ENST00000578199 SYNMO15061 1565 aa23.39■■□□□ 1.33
ERBB2-205ENST00000578199 NPATQ14207 1427 aa23.39■■□□□ 1.33
ERBB2-205ENST00000578199 MYOM1P52179 1685 aa23.39■■□□□ 1.33
ERBB2-205ENST00000578199 MYOM2P54296 1465 aa23.39■■□□□ 1.33
ERBB2-205ENST00000578199 KIAA1210Q9ULL0 1709 aa23.39■■□□□ 1.33
ERBB2-205ENST00000578199 PDE3BQ13370 1112 aa23.38■■□□□ 1.33
ERBB2-205ENST00000578199 EXOC6Q8TAG9 804 aa23.37■■□□□ 1.33
ERBB2-205ENST00000578199 LMTK2Q8IWU2 1503 aa23.37■■□□□ 1.33
ERBB2-205ENST00000578199 NEURL4Q96JN8 1562 aa23.37■■□□□ 1.33
ERBB2-205ENST00000578199 NUTM2DQ5VT03 806 aaPredicted RBP23.36■■□□□ 1.33
ERBB2-205ENST00000578199 IFT172Q9UG01 1749 aa23.36■■□□□ 1.33
ERBB2-205ENST00000578199 MLH3Q9UHC1 1453 aa23.36■■□□□ 1.33
ERBB2-205ENST00000578199 TRAK1Q9UPV9 953 aa23.36■■□□□ 1.33
ERBB2-205ENST00000578199 ERVK-7P63135 1459 aa23.36■■□□□ 1.33
ERBB2-205ENST00000578199 ASXL1Q8IXJ9 1541 aa23.35■■□□□ 1.33
ERBB2-205ENST00000578199 WDR43Q15061 677 aaKnown RBP eCLIP23.34■■□□□ 1.331e-5■■■■□ 24.6
ERBB2-205ENST00000578199 TMEM132EQ6IEE7 984 aa23.34■■□□□ 1.33
ERBB2-205ENST00000578199 HECW2Q9P2P5 1572 aa23.34■■□□□ 1.33
ERBB2-205ENST00000578199 PLIN1O60240 522 aa23.34■■□□□ 1.33
ERBB2-205ENST00000578199 CARD14Q9BXL6 1004 aa23.34■■□□□ 1.33
ERBB2-205ENST00000578199 KDM5AP29375 1690 aaKnown RBP23.34■■□□□ 1.33
ERBB2-205ENST00000578199 SENP3Q9H4L4 574 aaPredicted RBP23.33■■□□□ 1.33
ERBB2-205ENST00000578199 CFAP74Q9C0B2 1584 aa23.32■■□□□ 1.32
ERBB2-205ENST00000578199 ADGRB3O60242 1522 aa23.31■■□□□ 1.32
ERBB2-205ENST00000578199 NRXN1Q9ULB1 1477 aa23.3■■□□□ 1.32
ERBB2-205ENST00000578199 FANCIQ9NVI1 1328 aa23.3■■□□□ 1.32
ERBB2-205ENST00000578199 BCL11AQ9H165 835 aa23.29■■□□□ 1.32
ERBB2-205ENST00000578199 CCDC146Q8IYE0 955 aa23.29■■□□□ 1.32
ERBB2-205ENST00000578199 INSRP06213 1382 aa23.28■■□□□ 1.32
ERBB2-205ENST00000578199 PLEKHH1Q9ULM0 1364 aa23.28■■□□□ 1.32
ERBB2-205ENST00000578199 CENPJQ9HC77 1338 aaPredicted RBP23.27■■□□□ 1.32
ERBB2-205ENST00000578199 ZMYM4Q5VZL5 1548 aa23.27■■□□□ 1.32
ERBB2-205ENST00000578199 C14orf93Q9H972 538 aaKnown RBP23.27■■□□□ 1.32
ERBB2-205ENST00000578199 ABCC3O15438 1527 aa23.27■■□□□ 1.32
ERBB2-205ENST00000578199 PIK3C2GO75747 1445 aa23.25■■□□□ 1.31
ERBB2-205ENST00000578199 PPLO60437 1756 aa23.24■■□□□ 1.31
ERBB2-205ENST00000578199 SIGLEC1Q9BZZ2 1709 aa23.24■■□□□ 1.31
ERBB2-205ENST00000578199 CYB5RLQ6IPT4 315 aa23.23■■□□□ 1.31
ERBB2-205ENST00000578199 SLC12A5Q9H2X9 1139 aa23.23■■□□□ 1.31
ERBB2-205ENST00000578199 NPC1L1Q9UHC9 1359 aa23.23■■□□□ 1.31
ERBB2-205ENST00000578199 SLC24A1O60721 1099 aa23.22■■□□□ 1.31
ERBB2-205ENST00000578199 NEO1Q92859 1461 aa23.21■■□□□ 1.31
ERBB2-205ENST00000578199 TNNT2P45379 298 aaPredicted RBP23.2■■□□□ 1.3
ERBB2-205ENST00000578199 CAMSAP1Q5T5Y3 1602 aa23.2■■□□□ 1.3
ERBB2-205ENST00000578199 YEATS2Q9ULM3 1422 aa23.2■■□□□ 1.3
ERBB2-205ENST00000578199 DIP2CQ9Y2E4 1556 aa23.19■■□□□ 1.3
ERBB2-205ENST00000578199 MYO3AQ8NEV4 1616 aa23.19■■□□□ 1.3
ERBB2-205ENST00000578199 DUSP27Q5VZP5 1158 aa23.19■■□□□ 1.3
ERBB2-205ENST00000578199 IDI1Q13907 227 aa23.18■■□□□ 1.3
ERBB2-205ENST00000578199 C20orf194Q5TEA3 1177 aa23.18■■□□□ 1.3
ERBB2-205ENST00000578199 ADGRB1O14514 1584 aa23.18■■□□□ 1.3
ERBB2-205ENST00000578199 SETBP1Q9Y6X0 1596 aa23.18■■□□□ 1.3
ERBB2-205ENST00000578199 APAF1O14727 1248 aa23.18■■□□□ 1.3
ERBB2-205ENST00000578199 CRBNQ96SW2 442 aa23.18■■□□□ 1.3
ERBB2-205ENST00000578199 SBNO2Q9Y2G9 1366 aa23.17■■□□□ 1.3
ERBB2-205ENST00000578199 ZNF521Q96K83 1311 aa23.17■■□□□ 1.3
ERBB2-205ENST00000578199 RPGRIP1LQ68CZ1 1315 aa23.16■■□□□ 1.3
ERBB2-205ENST00000578199 GOLGA2Q08379 1002 aa23.16■■□□□ 1.3
ERBB2-205ENST00000578199 SAFB2Q14151 953 aaKnown RBP eCLIP23.16■■□□□ 1.3
ERBB2-205ENST00000578199 QRICH2Q9H0J4 1663 aa23.15■■□□□ 1.3
ERBB2-205ENST00000578199 SPINK5Q9NQ38 1064 aaPredicted RBP23.15■■□□□ 1.3
ERBB2-205ENST00000578199 NSD3Q9BZ95 1437 aa23.15■■□□□ 1.3
ERBB2-205ENST00000578199 RICTORQ6R327 1708 aa23.13■■□□□ 1.29
ERBB2-205ENST00000578199 VGFO15240 615 aaPredicted RBP23.13■■□□□ 1.29
ERBB2-205ENST00000578199 MORC1Q86VD1 984 aa23.11■■□□□ 1.29
ERBB2-205ENST00000578199 STK26Q9P289 416 aa23.11■■□□□ 1.29
ERBB2-205ENST00000578199 SLFN5Q08AF3 891 aa23.1■■□□□ 1.29
ERBB2-205ENST00000578199 SKAP1Q86WV1 359 aa23.1■■□□□ 1.29
ERBB2-205ENST00000578199 ZC3H13Q5T200 1668 aaKnown RBP23.1■■□□□ 1.29
ERBB2-205ENST00000578199 PIK3C2BO00750 1634 aa23.09■■□□□ 1.29
ERBB2-205ENST00000578199 NEXMIFQ5QGS0 1516 aa23.09■■□□□ 1.29
ERBB2-205ENST00000578199 DMRT2Q9Y5R5 561 aa23.09■■□□□ 1.29
ERBB2-205ENST00000578199 FBXO31Q5XUX0 539 aaPredicted RBP23.08■■□□□ 1.29
ERBB2-205ENST00000578199 CABP2Q9NPB3 220 aa23.08■■□□□ 1.29
ERBB2-205ENST00000578199 GLI2P10070 1586 aa23.08■■□□□ 1.29
ERBB2-205ENST00000578199 ERICH6Q7L0X2 663 aa23.08■■□□□ 1.28
ERBB2-205ENST00000578199 FAM69CQ0P6D2 419 aa23.07■■□□□ 1.28
ERBB2-205ENST00000578199 MYO5BQ9ULV0 1848 aa23.04■■□□□ 1.28
ERBB2-205ENST00000578199 ARHGAP31Q2M1Z3 1444 aa23.04■■□□□ 1.28
ERBB2-205ENST00000578199 EVC2Q86UK5 1308 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms