RNA–Protein interactions for RNA: ENST00000577940.6

DDX42-204, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 1,427 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-204ENST00000577940 POLR1AO95602 1720 aaPredicted RBP12.59□□□□□ -0.39
DDX42-204ENST00000577940 PROSER2Q86WR7 435 aaPredicted RBP12.59□□□□□ -0.39
DDX42-204ENST00000577940 IQGAP1P46940 1657 aa12.59□□□□□ -0.39
DDX42-204ENST00000577940 PPP4R3CPQ6ZMV5 832 aa12.58□□□□□ -0.4
DDX42-204ENST00000577940 UBR1Q8IWV7 1749 aa12.57□□□□□ -0.4
DDX42-204ENST00000577940 TBX22Q9Y458 520 aa12.57□□□□□ -0.4
DDX42-204ENST00000577940 ILDR2Q71H61 639 aa12.56□□□□□ -0.4
DDX42-204ENST00000577940 TMEM94Q12767 1356 aa12.55□□□□□ -0.4
DDX42-204ENST00000577940 PLEKHG1Q9ULL1 1385 aa12.55□□□□□ -0.4
DDX42-204ENST00000577940 RIMS2Q9UQ26 1411 aa12.55□□□□□ -0.4
DDX42-204ENST00000577940 PIK3C2BO00750 1634 aa12.55□□□□□ -0.4
DDX42-204ENST00000577940 SYNMO15061 1565 aa12.55□□□□□ -0.4
DDX42-204ENST00000577940 ADGRB3O60242 1522 aa12.54□□□□□ -0.4
DDX42-204ENST00000577940 SOCS7O14512 581 aa12.54□□□□□ -0.4
DDX42-204ENST00000577940 RRBP1Q9P2E9 1410 aaKnown RBP12.54□□□□□ -0.4
DDX42-204ENST00000577940 RNF216Q9NWF9 866 aaPredicted RBP12.53□□□□□ -0.4
DDX42-204ENST00000577940 KDM5AP29375 1690 aaKnown RBP12.52□□□□□ -0.4
DDX42-204ENST00000577940 ZFYVE9O95405 1425 aa12.52□□□□□ -0.41
DDX42-204ENST00000577940 TET3O43151 1660 aa12.51□□□□□ -0.41
DDX42-204ENST00000577940 ZNF326Q5BKZ1 582 aaKnown RBP12.51□□□□□ -0.41
DDX42-204ENST00000577940 NUTM2DQ5VT03 806 aaPredicted RBP12.51□□□□□ -0.41
DDX42-204ENST00000577940 TRIM52Q96A61 297 aa12.51□□□□□ -0.41
DDX42-204ENST00000577940 FAM135BQ49AJ0 1406 aa12.5□□□□□ -0.41
DDX42-204ENST00000577940 CFAP65Q6ZU64 1925 aaKnown RBP12.5□□□□□ -0.41
DDX42-204ENST00000577940 MSH6P52701 1360 aa12.5□□□□□ -0.41
DDX42-204ENST00000577940 UNC13BO14795 1591 aa12.5□□□□□ -0.41
DDX42-204ENST00000577940 TRIM26Q12899 539 aaPredicted RBP12.5□□□□□ -0.41
DDX42-204ENST00000577940 C14orf37Q86TY3 774 aa12.5□□□□□ -0.41
DDX42-204ENST00000577940 RBM33Q96EV2 1170 aaKnown RBP12.5□□□□□ -0.41
DDX42-204ENST00000577940 CNKSR2Q8WXI2 1034 aa12.49□□□□□ -0.41
DDX42-204ENST00000577940 SLAIN2Q9P270 581 aa12.49□□□□□ -0.41
DDX42-204ENST00000577940 PIK3R4Q99570 1358 aa12.49□□□□□ -0.41
DDX42-204ENST00000577940 NKTRP30414 1462 aaKnown RBP12.48□□□□□ -0.41
DDX42-204ENST00000577940 NAIPQ13075 1403 aa12.47□□□□□ -0.41
DDX42-204ENST00000577940 C19orf44Q9H6X5 657 aa12.47□□□□□ -0.41
DDX42-204ENST00000577940 NCOA3Q9Y6Q9 1424 aa12.47□□□□□ -0.41
DDX42-204ENST00000577940 SLC4A1APQ9BWU0 796 aaKnown RBP12.46□□□□□ -0.41
DDX42-204ENST00000577940 AMOTL2Q9Y2J4 779 aa12.46□□□□□ -0.41
DDX42-204ENST00000577940 IQGAP3Q86VI3 1631 aa12.46□□□□□ -0.41
DDX42-204ENST00000577940 ATF3P18847 181 aa12.45□□□□□ -0.42
DDX42-204ENST00000577940 CADPS2Q86UW7 1296 aa12.45□□□□□ -0.42
DDX42-204ENST00000577940 ALKQ9UM73 1620 aa12.45□□□□□ -0.42
DDX42-204ENST00000577940 TMEM131LA2VDJ0 1609 aa12.45□□□□□ -0.42
DDX42-204ENST00000577940 ACIN1Q9UKV3 1341 aaKnown RBP12.44□□□□□ -0.42
DDX42-204ENST00000577940 HFM1A2PYH4 1435 aa12.44□□□□□ -0.42
DDX42-204ENST00000577940 ADAMTS13Q76LX8 1427 aa12.44□□□□□ -0.42
DDX42-204ENST00000577940 VGFO15240 615 aaPredicted RBP12.44□□□□□ -0.42
DDX42-204ENST00000577940 GCC2Q8IWJ2 1684 aa12.44□□□□□ -0.42
DDX42-204ENST00000577940 STRCP1A6NGW2 1772 aa12.44□□□□□ -0.42
DDX42-204ENST00000577940 RPGRIP1LQ68CZ1 1315 aa12.42□□□□□ -0.42
DDX42-204ENST00000577940 E9PCH4 1651 aa12.42□□□□□ -0.42
DDX42-204ENST00000577940 NWD1Q149M9 1564 aa12.4□□□□□ -0.42
DDX42-204ENST00000577940 PCGF6Q9BYE7 350 aa12.39□□□□□ -0.43
DDX42-204ENST00000577940 DIP2AQ14689 1571 aa12.39□□□□□ -0.43
DDX42-204ENST00000577940 MED1Q15648 1581 aaPredicted RBP12.39□□□□□ -0.43
DDX42-204ENST00000577940 TRPM2O94759 1503 aa12.37□□□□□ -0.43
DDX42-204ENST00000577940 MPHOSPH9Q99550 1183 aa12.37□□□□□ -0.43
DDX42-204ENST00000577940 METP08581 1390 aa12.36□□□□□ -0.43
DDX42-204ENST00000577940 JCADQ9P266 1359 aa12.36□□□□□ -0.43
DDX42-204ENST00000577940 PTPRUQ92729 1446 aa12.36□□□□□ -0.43
DDX42-204ENST00000577940 BRINP3Q76B58 766 aa12.34□□□□□ -0.43
DDX42-204ENST00000577940 DCCP43146 1447 aa12.34□□□□□ -0.43
DDX42-204ENST00000577940 SETBP1Q9Y6X0 1596 aa12.34□□□□□ -0.43
DDX42-204ENST00000577940 RGS17Q9UGC6 210 aaPredicted RBP12.33□□□□□ -0.44
DDX42-204ENST00000577940 SPATA31A6Q5VVP1 1343 aa12.33□□□□□ -0.44
DDX42-204ENST00000577940 CCDC144AA2RUR9 1427 aa12.32□□□□□ -0.44
DDX42-204ENST00000577940 RGL3Q3MIN7 710 aa12.32□□□□□ -0.44
DDX42-204ENST00000577940 POTEHQ6S545 545 aa12.31□□□□□ -0.44
DDX42-204ENST00000577940 MEX3CQ5U5Q3 659 aaKnown RBP12.3□□□□□ -0.44
DDX42-204ENST00000577940 LRRC59Q96AG4 307 aaKnown RBP12.3□□□□□ -0.44
DDX42-204ENST00000577940 CHD2O14647 1828 aaKnown RBP12.3□□□□□ -0.44
DDX42-204ENST00000577940 ROBO1Q9Y6N7 1651 aa12.3□□□□□ -0.44
DDX42-204ENST00000577940 ANKRD30BQ9BXX2 1392 aa12.3□□□□□ -0.44
DDX42-204ENST00000577940 XIRP1Q702N8 1843 aaKnown RBP12.3□□□□□ -0.44
DDX42-204ENST00000577940 SPHKAPQ2M3C7 1700 aa12.29□□□□□ -0.44
DDX42-204ENST00000577940 NEXMIFQ5QGS0 1516 aa12.29□□□□□ -0.44
DDX42-204ENST00000577940 SETD5Q9C0A6 1442 aa12.29□□□□□ -0.44
DDX42-204ENST00000577940 CLTCL1P53675 1640 aa12.29□□□□□ -0.44
DDX42-204ENST00000577940 ADGRL3Q9HAR2 1447 aa12.28□□□□□ -0.44
DDX42-204ENST00000577940 ZNF772Q68DY9 489 aaPredicted RBP12.28□□□□□ -0.44
DDX42-204ENST00000577940 POTEAQ6S8J7 498 aa12.28□□□□□ -0.44
DDX42-204ENST00000577940 MYO5BQ9ULV0 1848 aa12.27□□□□□ -0.45
DDX42-204ENST00000577940 ADGRF5Q8IZF2 1346 aa12.27□□□□□ -0.45
DDX42-204ENST00000577940 MST1RQ04912 1400 aa12.26□□□□□ -0.45
DDX42-204ENST00000577940 PTCH1Q13635 1447 aa12.26□□□□□ -0.45
DDX42-204ENST00000577940 ROBO2Q9HCK4 1378 aa12.26□□□□□ -0.45
DDX42-204ENST00000577940 NUTM2BA6NNL0 878 aaPredicted RBP12.25□□□□□ -0.45
DDX42-204ENST00000577940 NUTM2EB1AL46 878 aaPredicted RBP12.25□□□□□ -0.45
DDX42-204ENST00000577940 HRCP23327 699 aa12.25□□□□□ -0.45
DDX42-204ENST00000577940 NUTM2AQ8IVF1 878 aaPredicted RBP12.25□□□□□ -0.45
DDX42-204ENST00000577940 STK26Q9P289 416 aa12.25□□□□□ -0.45
DDX42-204ENST00000577940 NRXN3Q9Y4C0 1643 aa12.24□□□□□ -0.45
DDX42-204ENST00000577940 SPATA31E1Q6ZUB1 1445 aa12.24□□□□□ -0.45
DDX42-204ENST00000577940 PRAG1Q86YV5 1406 aa12.23□□□□□ -0.45
DDX42-204ENST00000577940 SIRT1Q96EB6 747 aa12.23□□□□□ -0.45
DDX42-204ENST00000577940 AHDC1Q5TGY3 1603 aaPredicted RBP12.23□□□□□ -0.45
DDX42-204ENST00000577940 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.23□□□□□ -0.45
DDX42-204ENST00000577940 TMEM132EQ6IEE7 984 aa12.22□□□□□ -0.45
DDX42-204ENST00000577940 ORAI2Q96SN7 254 aa12.22□□□□□ -0.45
DDX42-204ENST00000577940 C14orf93Q9H972 538 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms