RNA–Protein interactions for RNA: ENST00000577589.1

CUEDC1-205, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-205ENST00000577589 SPATA31A6Q5VVP1 1343 aa20.24■□□□□ 0.83
CUEDC1-205ENST00000577589 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.22■□□□□ 0.83
CUEDC1-205ENST00000577589 NOS1P29475 1434 aa20.22■□□□□ 0.83
CUEDC1-205ENST00000577589 ZFYVE9O95405 1425 aa20.21■□□□□ 0.83
CUEDC1-205ENST00000577589 ZNF772Q68DY9 489 aaPredicted RBP20.21■□□□□ 0.83
CUEDC1-205ENST00000577589 EP400Q96L91 3159 aa20.2■□□□□ 0.82
CUEDC1-205ENST00000577589 MYOM3Q5VTT5 1437 aa20.19■□□□□ 0.82
CUEDC1-205ENST00000577589 STAG3Q9UJ98 1225 aa20.17■□□□□ 0.82
CUEDC1-205ENST00000577589 ABCC5O15440 1437 aa20.17■□□□□ 0.82
CUEDC1-205ENST00000577589 GCC2Q8IWJ2 1684 aa20.16■□□□□ 0.82
CUEDC1-205ENST00000577589 MEX3CQ5U5Q3 659 aaKnown RBP20.16■□□□□ 0.82
CUEDC1-205ENST00000577589 RGS12O14924 1447 aa20.16■□□□□ 0.82
CUEDC1-205ENST00000577589 PLEKHG1Q9ULL1 1385 aa20.15■□□□□ 0.82
CUEDC1-205ENST00000577589 NCOA3Q9Y6Q9 1424 aa20.14■□□□□ 0.81
CUEDC1-205ENST00000577589 RXRBP28702 533 aa20.14■□□□□ 0.81
CUEDC1-205ENST00000577589 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.14■□□□□ 0.81
CUEDC1-205ENST00000577589 TMEM131LA2VDJ0 1609 aa20.13■□□□□ 0.81
CUEDC1-205ENST00000577589 RRP7BPQ9NSQ0 103 aa20.11■□□□□ 0.81
CUEDC1-205ENST00000577589 NHSL1Q5SYE7 1610 aa20.11■□□□□ 0.81
CUEDC1-205ENST00000577589 AFF2P51816 1311 aa20.1■□□□□ 0.81
CUEDC1-205ENST00000577589 ADAMTS13Q76LX8 1427 aa20.1■□□□□ 0.81
CUEDC1-205ENST00000577589 KANK1Q14678 1352 aa20.09■□□□□ 0.81
CUEDC1-205ENST00000577589 KANK4Q5T7N3 995 aaPredicted RBP20.09■□□□□ 0.81
CUEDC1-205ENST00000577589 RIMS2Q9UQ26 1411 aa20.09■□□□□ 0.81
CUEDC1-205ENST00000577589 PTPN23Q9H3S7 1636 aa20.09■□□□□ 0.81
CUEDC1-205ENST00000577589 ASXL1Q8IXJ9 1541 aa20.08■□□□□ 0.81
CUEDC1-205ENST00000577589 DAPK1P53355 1430 aa20.07■□□□□ 0.8
CUEDC1-205ENST00000577589 BRINP3Q76B58 766 aa20.06■□□□□ 0.8
CUEDC1-205ENST00000577589 SETD5Q9C0A6 1442 aa20.05■□□□□ 0.8
CUEDC1-205ENST00000577589 VPS8Q8N3P4 1428 aa20.04■□□□□ 0.8
CUEDC1-205ENST00000577589 NUTM2BA6NNL0 878 aaPredicted RBP20.04■□□□□ 0.8
CUEDC1-205ENST00000577589 NUTM2EB1AL46 878 aaPredicted RBP20.04■□□□□ 0.8
CUEDC1-205ENST00000577589 NUTM2AQ8IVF1 878 aaPredicted RBP20.04■□□□□ 0.8
CUEDC1-205ENST00000577589 SETBP1Q9Y6X0 1596 aa20.04■□□□□ 0.8
CUEDC1-205ENST00000577589 CADPS2Q86UW7 1296 aa20.03■□□□□ 0.8
CUEDC1-205ENST00000577589 BCANQ96GW7 911 aa20.03■□□□□ 0.8
CUEDC1-205ENST00000577589 SLC52A1Q9NWF4 448 aa20.03■□□□□ 0.8
CUEDC1-205ENST00000577589 TBX22Q9Y458 520 aa20.03■□□□□ 0.8
CUEDC1-205ENST00000577589 RPRD2Q5VT52 1461 aaKnown RBP20.03■□□□□ 0.8
CUEDC1-205ENST00000577589 PTPRUQ92729 1446 aa20.02■□□□□ 0.8
CUEDC1-205ENST00000577589 XRN1Q8IZH2 1706 aaKnown RBP20.02■□□□□ 0.8
CUEDC1-205ENST00000577589 C19orf44Q9H6X5 657 aa20.01■□□□□ 0.79
CUEDC1-205ENST00000577589 DCCP43146 1447 aa20■□□□□ 0.79
CUEDC1-205ENST00000577589 MST1RQ04912 1400 aa20■□□□□ 0.79
CUEDC1-205ENST00000577589 UNC13BO14795 1591 aa20■□□□□ 0.79
CUEDC1-205ENST00000577589 C14orf37Q86TY3 774 aa19.99■□□□□ 0.79
CUEDC1-205ENST00000577589 NRXN3Q9Y4C0 1643 aa19.98■□□□□ 0.79
CUEDC1-205ENST00000577589 PNPLA6Q8IY17 1366 aa19.98■□□□□ 0.79
CUEDC1-205ENST00000577589 PIK3R4Q99570 1358 aa19.98■□□□□ 0.79
CUEDC1-205ENST00000577589 TRPM2O94759 1503 aa19.98■□□□□ 0.79
CUEDC1-205ENST00000577589 ATF3P18847 181 aa19.98■□□□□ 0.79
CUEDC1-205ENST00000577589 RBM6P78332 1123 aaKnown RBP19.97■□□□□ 0.79
CUEDC1-205ENST00000577589 PPP1R15AO75807 674 aaPredicted RBP19.96■□□□□ 0.79
CUEDC1-205ENST00000577589 ADGRL2O95490 1459 aa19.95■□□□□ 0.78
CUEDC1-205ENST00000577589 QTRT2Q9H974 415 aaKnown RBP19.95■□□□□ 0.78
CUEDC1-205ENST00000577589 C8orf37Q96NL8 207 aa19.94■□□□□ 0.78
CUEDC1-205ENST00000577589 ANKRD30AQ9BXX3 1397 aa19.94■□□□□ 0.78
CUEDC1-205ENST00000577589 E9PCH4 1651 aa19.94■□□□□ 0.78
CUEDC1-205ENST00000577589 NALCNQ8IZF0 1738 aa19.93■□□□□ 0.78
CUEDC1-205ENST00000577589 LAMC1P11047 1609 aa19.93■□□□□ 0.78
CUEDC1-205ENST00000577589 ATAD2Q6PL18 1390 aa19.93■□□□□ 0.78
CUEDC1-205ENST00000577589 NUTM2DQ5VT03 806 aaPredicted RBP19.92■□□□□ 0.78
CUEDC1-205ENST00000577589 DDX17Q92841 729 aaKnown RBP19.92■□□□□ 0.78
CUEDC1-205ENST00000577589 CHIC2Q9UKJ5 165 aa19.92■□□□□ 0.78
CUEDC1-205ENST00000577589 AMOTL2Q9Y2J4 779 aa19.89■□□□□ 0.77
CUEDC1-205ENST00000577589 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.86■□□□□ 0.77
CUEDC1-205ENST00000577589 LRRC59Q96AG4 307 aaKnown RBP19.86■□□□□ 0.77
CUEDC1-205ENST00000577589 ADGRL3Q9HAR2 1447 aa19.85■□□□□ 0.77
CUEDC1-205ENST00000577589 HDGFP51858 240 aaKnown RBP19.85■□□□□ 0.77
CUEDC1-205ENST00000577589 ATRNO75882 1429 aa19.85■□□□□ 0.77
CUEDC1-205ENST00000577589 ANKRD50Q9ULJ7 1429 aa19.85■□□□□ 0.77
CUEDC1-205ENST00000577589 COL22A1Q8NFW1 1626 aaPredicted RBP19.84■□□□□ 0.77
CUEDC1-205ENST00000577589 ZRANB1Q9UGI0 708 aa19.83■□□□□ 0.77
CUEDC1-205ENST00000577589 IQGAP3Q86VI3 1631 aa19.83■□□□□ 0.76
CUEDC1-205ENST00000577589 ADAMTS2O95450 1211 aa19.82■□□□□ 0.76
CUEDC1-205ENST00000577589 NGLY1Q96IV0 654 aa19.81■□□□□ 0.76
CUEDC1-205ENST00000577589 METP08581 1390 aa19.81■□□□□ 0.76
CUEDC1-205ENST00000577589 LRP5O75197 1615 aa19.8■□□□□ 0.76
CUEDC1-205ENST00000577589 CHGAP10645 457 aaKnown RBP19.8■□□□□ 0.76
CUEDC1-205ENST00000577589 C1orf167Q5SNV9 1468 aa19.79■□□□□ 0.76
CUEDC1-205ENST00000577589 MARF1Q9Y4F3 1742 aaKnown RBP19.79■□□□□ 0.76
CUEDC1-205ENST00000577589 USP21Q9UK80 565 aa19.78■□□□□ 0.76
CUEDC1-205ENST00000577589 PTCH1Q13635 1447 aa19.77■□□□□ 0.76
CUEDC1-205ENST00000577589 FNBP4Q8N3X1 1017 aaPredicted RBP19.77■□□□□ 0.76
CUEDC1-205ENST00000577589 MYOM2P54296 1465 aa19.76■□□□□ 0.75
CUEDC1-205ENST00000577589 BCL9LQ86UU0 1499 aa19.76■□□□□ 0.75
CUEDC1-205ENST00000577589 TRPC5Q9UL62 973 aaPredicted RBP19.76■□□□□ 0.75
CUEDC1-205ENST00000577589 SOS2Q07890 1332 aaPredicted RBP19.76■□□□□ 0.75
CUEDC1-205ENST00000577589 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.73■□□□□ 0.75
CUEDC1-205ENST00000577589 BRWD3Q6RI45 1802 aa19.72■□□□□ 0.75
CUEDC1-205ENST00000577589 GLI3P10071 1580 aa19.72■□□□□ 0.75
CUEDC1-205ENST00000577589 NEXMIFQ5QGS0 1516 aa19.71■□□□□ 0.75
CUEDC1-205ENST00000577589 SPHKAPQ2M3C7 1700 aa19.71■□□□□ 0.75
CUEDC1-205ENST00000577589 CCDC125Q86Z20 511 aa19.69■□□□□ 0.74
CUEDC1-205ENST00000577589 ORAI2Q96SN7 254 aa19.68■□□□□ 0.74
CUEDC1-205ENST00000577589 BLMP54132 1417 aaPredicted RBP19.68■□□□□ 0.74
CUEDC1-205ENST00000577589 FOXD1Q16676 465 aa19.67■□□□□ 0.74
CUEDC1-205ENST00000577589 PXDNQ92626 1479 aa19.67■□□□□ 0.74
CUEDC1-205ENST00000577589 LOC105371045A0A1W2PR82 267 aa19.65■□□□□ 0.74
CUEDC1-205ENST00000577589 DEFB132Q7Z7B7 95 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms