RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 CASKIN1Q8WXD9 1431 aa10.12□□□□□ -0.79
NUP88-212ENST00000576708 NCKAP5LQ9HCH0 1330 aa10.11□□□□□ -0.79
NUP88-212ENST00000576708 HSPA2P54652 639 aa10.11□□□□□ -0.79
NUP88-212ENST00000576708 MYT1LQ9UL68 1186 aa10.11□□□□□ -0.79
NUP88-212ENST00000576708 ATP10AO60312 1499 aa10.1□□□□□ -0.79
NUP88-212ENST00000576708 LMTK3Q96Q04 1460 aa10.1□□□□□ -0.79
NUP88-212ENST00000576708 ARHGEF12Q9NZN5 1544 aa10.09□□□□□ -0.79
NUP88-212ENST00000576708 CEBPAP49715 358 aaPredicted RBP10.09□□□□□ -0.79
NUP88-212ENST00000576708 TMEM121BQ9BXQ6 578 aaPredicted RBP10.09□□□□□ -0.79
NUP88-212ENST00000576708 CDC42BPBQ9Y5S2 1711 aa10.09□□□□□ -0.79
NUP88-212ENST00000576708 C9orf84Q5VXU9 1444 aa10.08□□□□□ -0.8
NUP88-212ENST00000576708 TRAPPC8Q9Y2L5 1435 aa10.08□□□□□ -0.8
NUP88-212ENST00000576708 LARP6Q9BRS8 491 aaKnown RBP10.08□□□□□ -0.8
NUP88-212ENST00000576708 CCDC18Q5T9S5 1454 aa10.08□□□□□ -0.8
NUP88-212ENST00000576708 ZNF518AQ6AHZ1 1483 aa10.08□□□□□ -0.8
NUP88-212ENST00000576708 KDM5CP41229 1560 aa10.07□□□□□ -0.8
NUP88-212ENST00000576708 WDR70Q9NW82 654 aa10.07□□□□□ -0.8
NUP88-212ENST00000576708 ZNF777Q9ULD5 760 aaPredicted RBP10.07□□□□□ -0.8
NUP88-212ENST00000576708 PREX2Q70Z35 1606 aa10.07□□□□□ -0.8
NUP88-212ENST00000576708 FER1L4A9Z1Z3 1794 aa10.06□□□□□ -0.8
NUP88-212ENST00000576708 FYCO1Q9BQS8 1478 aa10.06□□□□□ -0.8
NUP88-212ENST00000576708 MAMSTRQ6ZN01 415 aa10.06□□□□□ -0.8
NUP88-212ENST00000576708 CRISPLD2Q9H0B8 497 aa10.06□□□□□ -0.8
NUP88-212ENST00000576708 DIP2CQ9Y2E4 1556 aa10.05□□□□□ -0.8
NUP88-212ENST00000576708 ABCA6Q8N139 1617 aa10.05□□□□□ -0.8
NUP88-212ENST00000576708 PDE4AP27815 886 aa10.05□□□□□ -0.8
NUP88-212ENST00000576708 FAM163AQ96GL9 167 aaPredicted RBP10.05□□□□□ -0.8
NUP88-212ENST00000576708 ABCC1P33527 1531 aa10.05□□□□□ -0.8
NUP88-212ENST00000576708 CDC42BPAQ5VT25 1732 aa10.04□□□□□ -0.8
NUP88-212ENST00000576708 HNRNPMP52272 730 aaKnown RBP eCLIP10.04□□□□□ -0.8
NUP88-212ENST00000576708 TMEM92Q6UXU6 159 aa10.04□□□□□ -0.8
NUP88-212ENST00000576708 MLH3Q9UHC1 1453 aa10.04□□□□□ -0.8
NUP88-212ENST00000576708 GPATCH8Q9UKJ3 1502 aaKnown RBP10.03□□□□□ -0.8
NUP88-212ENST00000576708 ITSN2Q9NZM3 1697 aa10.03□□□□□ -0.8
NUP88-212ENST00000576708 SAMD9LQ8IVG5 1584 aa10.02□□□□□ -0.81
NUP88-212ENST00000576708 C3orf67Q6ZVT6 689 aa10.02□□□□□ -0.81
NUP88-212ENST00000576708 TMC2Q8TDI7 906 aa10.02□□□□□ -0.81
NUP88-212ENST00000576708 C2orf72A6NCS6 295 aa10.01□□□□□ -0.81
NUP88-212ENST00000576708 FBXO41Q8TF61 875 aa10.01□□□□□ -0.81
NUP88-212ENST00000576708 DDX27Q96GQ7 796 aaKnown RBP10.01□□□□□ -0.81
NUP88-212ENST00000576708 GPHNQ9NQX3 736 aaPredicted RBP10.01□□□□□ -0.81
NUP88-212ENST00000576708 SYCP2Q9BX26 1530 aa10.01□□□□□ -0.81
NUP88-212ENST00000576708 KIDINS220Q9ULH0 1771 aa10.01□□□□□ -0.81
NUP88-212ENST00000576708 CFDP1Q9UEE9 299 aaPredicted RBP10□□□□□ -0.81
NUP88-212ENST00000576708 ZNF644Q9H582 1327 aaPredicted RBP10□□□□□ -0.81
NUP88-212ENST00000576708 REREQ9P2R6 1566 aa10□□□□□ -0.81
NUP88-212ENST00000576708 MTUS2Q5JR59 1369 aa10□□□□□ -0.81
NUP88-212ENST00000576708 CCNB3Q8WWL7 1395 aa10□□□□□ -0.81
NUP88-212ENST00000576708 DSG2Q14126 1118 aa9.99□□□□□ -0.81
NUP88-212ENST00000576708 MFSD10Q14728 455 aa9.99□□□□□ -0.81
NUP88-212ENST00000576708 SCUBE2Q9NQ36 999 aa9.99□□□□□ -0.81
NUP88-212ENST00000576708 SPAG9O60271 1321 aaKnown RBP9.99□□□□□ -0.81
NUP88-212ENST00000576708 CEP162Q5TB80 1403 aa9.99□□□□□ -0.81
NUP88-212ENST00000576708 AGLP35573 1532 aa9.98□□□□□ -0.81
NUP88-212ENST00000576708 LOC105371045A0A1W2PR82 267 aa9.98□□□□□ -0.81
NUP88-212ENST00000576708 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.98□□□□□ -0.81
NUP88-212ENST00000576708 PREX1Q8TCU6 1659 aa9.97□□□□□ -0.81
NUP88-212ENST00000576708 PPP1R15BQ5SWA1 713 aa9.97□□□□□ -0.81
NUP88-212ENST00000576708 KCNV2Q8TDN2 545 aa9.97□□□□□ -0.81
NUP88-212ENST00000576708 ESF1Q9H501 851 aaKnown RBP9.97□□□□□ -0.81
NUP88-212ENST00000576708 C3P01024 1663 aa9.96□□□□□ -0.81
NUP88-212ENST00000576708 KIF3CO14782 793 aa9.96□□□□□ -0.82
NUP88-212ENST00000576708 E2F4Q16254 413 aa9.95□□□□□ -0.82
NUP88-212ENST00000576708 UHRF1BP1Q6BDS2 1440 aa9.95□□□□□ -0.82
NUP88-212ENST00000576708 KIAA1107Q9UPP5 1409 aa9.95□□□□□ -0.82
NUP88-212ENST00000576708 ATP7AQ04656 1500 aa9.95□□□□□ -0.82
NUP88-212ENST00000576708 TIAM1Q13009 1591 aa9.95□□□□□ -0.82
NUP88-212ENST00000576708 SUPT6HQ7KZ85 1726 aaKnown RBP9.95□□□□□ -0.82
NUP88-212ENST00000576708 FOXK1P85037 733 aa9.94□□□□□ -0.82
NUP88-212ENST00000576708 PLPP6Q8IY26 295 aa9.94□□□□□ -0.82
NUP88-212ENST00000576708 CERKQ8TCT0 537 aa9.94□□□□□ -0.82
NUP88-212ENST00000576708 STRCQ7RTU9 1775 aa9.93□□□□□ -0.82
NUP88-212ENST00000576708 INO80Q9ULG1 1556 aaPredicted RBP9.93□□□□□ -0.82
NUP88-212ENST00000576708 EHBP1L1Q8N3D4 1523 aa9.93□□□□□ -0.82
NUP88-212ENST00000576708 A2MP01023 1474 aa9.93□□□□□ -0.82
NUP88-212ENST00000576708 PLEKHH2Q8IVE3 1493 aa9.93□□□□□ -0.82
NUP88-212ENST00000576708 GGT6Q6P531 493 aa9.93□□□□□ -0.82
NUP88-212ENST00000576708 MBD5Q9P267 1494 aa9.92□□□□□ -0.82
NUP88-212ENST00000576708 CNTLNQ9NXG0 1405 aa9.91□□□□□ -0.82
NUP88-212ENST00000576708 ZMYM3Q14202 1370 aa9.91□□□□□ -0.82
NUP88-212ENST00000576708 PLXNC1O60486 1568 aa9.91□□□□□ -0.82
NUP88-212ENST00000576708 NCOA2Q15596 1464 aa9.91□□□□□ -0.82
NUP88-212ENST00000576708 CLTCQ00610 1675 aaKnown RBP9.9□□□□□ -0.82
NUP88-212ENST00000576708 SETD1BQ9UPS6 1966 aaKnown RBP9.89□□□□□ -0.83
NUP88-212ENST00000576708 SLAIN1Q8ND83 568 aa9.89□□□□□ -0.83
NUP88-212ENST00000576708 MROH2AA6NES4 1674 aa9.88□□□□□ -0.83
NUP88-212ENST00000576708 CAMSAP2Q08AD1 1489 aa9.88□□□□□ -0.83
NUP88-212ENST00000576708 CAMK2BQ13554 666 aa9.88□□□□□ -0.83
NUP88-212ENST00000576708 CDAN1Q8IWY9 1227 aa9.88□□□□□ -0.83
NUP88-212ENST00000576708 BCANQ96GW7 911 aa9.88□□□□□ -0.83
NUP88-212ENST00000576708 EMILIN3Q9NT22 766 aa9.88□□□□□ -0.83
NUP88-212ENST00000576708 KANK4Q5T7N3 995 aaPredicted RBP9.87□□□□□ -0.83
NUP88-212ENST00000576708 PTPRKQ15262 1439 aa9.87□□□□□ -0.83
NUP88-212ENST00000576708 NCOA1Q15788 1441 aa9.87□□□□□ -0.83
NUP88-212ENST00000576708 DHX29Q7Z478 1369 aaKnown RBP9.87□□□□□ -0.83
NUP88-212ENST00000576708 ADGBQ8N7X0 1667 aa9.87□□□□□ -0.83
NUP88-212ENST00000576708 CAMSAP1Q5T5Y3 1602 aa9.86□□□□□ -0.83
NUP88-212ENST00000576708 RTEL1-TNFRSF6BF6WH68 1400 aa9.86□□□□□ -0.83
NUP88-212ENST00000576708 PTPRTO14522 1441 aa9.86□□□□□ -0.83
NUP88-212ENST00000576708 KIF3BO15066 747 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms