RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 C19orf44Q9H6X5 657 aa11.97□□□□□ -0.49
RAB40B-210ENST00000576148 NCOA3Q9Y6Q9 1424 aa11.96□□□□□ -0.49
RAB40B-210ENST00000576148 SF3B2Q13435 895 aaKnown RBP11.96□□□□□ -0.49
RAB40B-210ENST00000576148 DIP2AQ14689 1571 aa11.96□□□□□ -0.5
RAB40B-210ENST00000576148 CASKIN1Q8WXD9 1431 aa11.95□□□□□ -0.5
RAB40B-210ENST00000576148 SETD5Q9C0A6 1442 aa11.95□□□□□ -0.5
RAB40B-210ENST00000576148 KDM5AP29375 1690 aaKnown RBP11.95□□□□□ -0.5
RAB40B-210ENST00000576148 HRCP23327 699 aa11.95□□□□□ -0.5
RAB40B-210ENST00000576148 DEFB132Q7Z7B7 95 aa11.95□□□□□ -0.5
RAB40B-210ENST00000576148 BLMP54132 1417 aaPredicted RBP11.94□□□□□ -0.5
RAB40B-210ENST00000576148 TET3O43151 1660 aa11.94□□□□□ -0.5
RAB40B-210ENST00000576148 PSDA5PKW4 1024 aaPredicted RBP11.94□□□□□ -0.5
RAB40B-210ENST00000576148 RSPH4AQ5TD94 716 aa11.94□□□□□ -0.5
RAB40B-210ENST00000576148 EHMT2Q96KQ7 1210 aa11.94□□□□□ -0.5
RAB40B-210ENST00000576148 EP400Q96L91 3159 aa11.94□□□□□ -0.5
RAB40B-210ENST00000576148 SENP3-EIF4A1A0A087X0R7 540 aa11.92□□□□□ -0.5
RAB40B-210ENST00000576148 FNBP4Q8N3X1 1017 aaPredicted RBP11.91□□□□□ -0.5
RAB40B-210ENST00000576148 CAMSAP2Q08AD1 1489 aa11.9□□□□□ -0.5
RAB40B-210ENST00000576148 NHSL1Q5SYE7 1610 aa11.9□□□□□ -0.5
RAB40B-210ENST00000576148 TSPY4P0CV99 314 aa11.9□□□□□ -0.5
RAB40B-210ENST00000576148 TSPY10P0CW01 314 aa11.9□□□□□ -0.5
RAB40B-210ENST00000576148 PNPLA6Q8IY17 1366 aa11.9□□□□□ -0.5
RAB40B-210ENST00000576148 CCDC141Q6ZP82 1450 aa11.89□□□□□ -0.51
RAB40B-210ENST00000576148 ATRNO75882 1429 aa11.88□□□□□ -0.51
RAB40B-210ENST00000576148 EFCAB6Q5THR3 1501 aa11.88□□□□□ -0.51
RAB40B-210ENST00000576148 DCAF8L1A6NGE4 600 aa11.88□□□□□ -0.51
RAB40B-210ENST00000576148 IDI1Q13907 227 aa11.88□□□□□ -0.51
RAB40B-210ENST00000576148 MAST1Q9Y2H9 1570 aa11.87□□□□□ -0.51
RAB40B-210ENST00000576148 PIK3C2BO00750 1634 aa11.86□□□□□ -0.51
RAB40B-210ENST00000576148 MROH1Q8NDA8 1641 aa11.86□□□□□ -0.51
RAB40B-210ENST00000576148 CFAP65Q6ZU64 1925 aaKnown RBP11.86□□□□□ -0.51
RAB40B-210ENST00000576148 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.86□□□□□ -0.51
RAB40B-210ENST00000576148 MTUS2Q5JR59 1369 aa11.86□□□□□ -0.51
RAB40B-210ENST00000576148 ARHGAP31Q2M1Z3 1444 aa11.86□□□□□ -0.51
RAB40B-210ENST00000576148 PPP1R15AO75807 674 aaPredicted RBP11.85□□□□□ -0.51
RAB40B-210ENST00000576148 GJD4Q96KN9 370 aaPredicted RBP11.85□□□□□ -0.51
RAB40B-210ENST00000576148 TBX22Q9Y458 520 aa11.85□□□□□ -0.51
RAB40B-210ENST00000576148 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.85□□□□□ -0.51
RAB40B-210ENST00000576148 ASXL1Q8IXJ9 1541 aa11.85□□□□□ -0.51
RAB40B-210ENST00000576148 HDGFP51858 240 aaKnown RBP11.84□□□□□ -0.51
RAB40B-210ENST00000576148 DDX17Q92841 729 aaKnown RBP11.84□□□□□ -0.51
RAB40B-210ENST00000576148 FYCO1Q9BQS8 1478 aa11.83□□□□□ -0.52
RAB40B-210ENST00000576148 BAG6P46379 1132 aa11.83□□□□□ -0.52
RAB40B-210ENST00000576148 BCL9LQ86UU0 1499 aa11.83□□□□□ -0.52
RAB40B-210ENST00000576148 PLEKHG1Q9ULL1 1385 aa11.82□□□□□ -0.52
RAB40B-210ENST00000576148 CHD2O14647 1828 aaKnown RBP11.82□□□□□ -0.52
RAB40B-210ENST00000576148 R3HDM1Q15032 1099 aaKnown RBP11.82□□□□□ -0.52
RAB40B-210ENST00000576148 PTCH1Q13635 1447 aa11.82□□□□□ -0.52
RAB40B-210ENST00000576148 DCCP43146 1447 aa11.8□□□□□ -0.52
RAB40B-210ENST00000576148 CEP152O94986 1710 aa11.8□□□□□ -0.52
RAB40B-210ENST00000576148 C1QTNF8P60827 252 aa11.79□□□□□ -0.52
RAB40B-210ENST00000576148 ZNF784Q8NCA9 323 aaPredicted RBP11.78□□□□□ -0.52
RAB40B-210ENST00000576148 AMOTL2Q9Y2J4 779 aa11.78□□□□□ -0.52
RAB40B-210ENST00000576148 MST1RQ04912 1400 aa11.77□□□□□ -0.52
RAB40B-210ENST00000576148 SLC52A1Q9NWF4 448 aa11.77□□□□□ -0.53
RAB40B-210ENST00000576148 EIF2AK4Q9P2K8 1649 aaKnown RBP11.77□□□□□ -0.53
RAB40B-210ENST00000576148 PIK3R4Q99570 1358 aa11.77□□□□□ -0.53
RAB40B-210ENST00000576148 UNC13BO14795 1591 aa11.76□□□□□ -0.53
RAB40B-210ENST00000576148 SEPT12Q8IYM1 358 aa11.76□□□□□ -0.53
RAB40B-210ENST00000576148 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.75□□□□□ -0.53
RAB40B-210ENST00000576148 ADGRB3O60242 1522 aa11.75□□□□□ -0.53
RAB40B-210ENST00000576148 EN1Q05925 392 aaPredicted RBP11.74□□□□□ -0.53
RAB40B-210ENST00000576148 KANK1Q14678 1352 aa11.74□□□□□ -0.53
RAB40B-210ENST00000576148 RIMS2Q9UQ26 1411 aa11.74□□□□□ -0.53
RAB40B-210ENST00000576148 ZFYVE9O95405 1425 aa11.73□□□□□ -0.53
RAB40B-210ENST00000576148 SOS2Q07890 1332 aaPredicted RBP11.73□□□□□ -0.53
RAB40B-210ENST00000576148 ARHGEF5Q12774 1597 aa11.73□□□□□ -0.53
RAB40B-210ENST00000576148 KRT27Q7Z3Y8 459 aa11.73□□□□□ -0.53
RAB40B-210ENST00000576148 UNC5CLQ8IV45 518 aa11.73□□□□□ -0.53
RAB40B-210ENST00000576148 PPP1R1BQ9UD71 204 aaPredicted RBP11.73□□□□□ -0.53
RAB40B-210ENST00000576148 RALGAPBQ86X10 1494 aa11.72□□□□□ -0.53
RAB40B-210ENST00000576148 CEP162Q5TB80 1403 aa11.72□□□□□ -0.53
RAB40B-210ENST00000576148 ADAMTS13Q76LX8 1427 aa11.7□□□□□ -0.54
RAB40B-210ENST00000576148 NOS1P29475 1434 aa11.69□□□□□ -0.54
RAB40B-210ENST00000576148 DUOX2Q9NRD8 1548 aa11.69□□□□□ -0.54
RAB40B-210ENST00000576148 EHBP1L1Q8N3D4 1523 aa11.68□□□□□ -0.54
RAB40B-210ENST00000576148 SPHKAPQ2M3C7 1700 aa11.68□□□□□ -0.54
RAB40B-210ENST00000576148 NINLQ9Y2I6 1382 aa11.67□□□□□ -0.54
RAB40B-210ENST00000576148 GLI3P10071 1580 aa11.67□□□□□ -0.54
RAB40B-210ENST00000576148 ONECUT3O60422 494 aaPredicted RBP11.67□□□□□ -0.54
RAB40B-210ENST00000576148 CHGAP10645 457 aaKnown RBP11.67□□□□□ -0.54
RAB40B-210ENST00000576148 PTPRUQ92729 1446 aa11.67□□□□□ -0.54
RAB40B-210ENST00000576148 TRPM2O94759 1503 aa11.66□□□□□ -0.54
RAB40B-210ENST00000576148 MYOM2P54296 1465 aa11.66□□□□□ -0.54
RAB40B-210ENST00000576148 RPRD2Q5VT52 1461 aaKnown RBP11.66□□□□□ -0.54
RAB40B-210ENST00000576148 ORAI2Q96SN7 254 aa11.66□□□□□ -0.54
RAB40B-210ENST00000576148 SPON1Q9HCB6 807 aa11.66□□□□□ -0.54
RAB40B-210ENST00000576148 CCDC9Q9Y3X0 531 aaKnown RBP11.66□□□□□ -0.54
RAB40B-210ENST00000576148 C1orf167Q5SNV9 1468 aa11.65□□□□□ -0.54
RAB40B-210ENST00000576148 A0A0G2JS52 829 aa11.65□□□□□ -0.54
RAB40B-210ENST00000576148 MYT1Q01538 1121 aa11.65□□□□□ -0.54
RAB40B-210ENST00000576148 EZH2Q15910 746 aaKnown RBP11.65□□□□□ -0.54
RAB40B-210ENST00000576148 RRP7BPQ9NSQ0 103 aa11.65□□□□□ -0.54
RAB40B-210ENST00000576148 KIF15Q9NS87 1388 aa11.65□□□□□ -0.55
RAB40B-210ENST00000576148 ERBINQ96RT1 1412 aa11.64□□□□□ -0.55
RAB40B-210ENST00000576148 ADGRL3Q9HAR2 1447 aa11.64□□□□□ -0.55
RAB40B-210ENST00000576148 VPS72Q15906 364 aa11.64□□□□□ -0.55
RAB40B-210ENST00000576148 BRWD3Q6RI45 1802 aa11.64□□□□□ -0.55
RAB40B-210ENST00000576148 LMTK2Q8IWU2 1503 aa11.63□□□□□ -0.55
RAB40B-210ENST00000576148 COL22A1Q8NFW1 1626 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms