RNA–Protein interactions for RNA: ENST00000574788.5

USP6-205, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 8,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-205ENST00000574788 C9orf78Q9NZ63 289 aaPredicted RBP12.16□□□□□ -0.46
USP6-205ENST00000574788 NACADO15069 1562 aa12.15□□□□□ -0.46
USP6-205ENST00000574788 CCP110O43303 1012 aa12.15□□□□□ -0.46
USP6-205ENST00000574788 DDX58O95786 925 aaKnown RBP12.15□□□□□ -0.46
USP6-205ENST00000574788 SASS6Q6UVJ0 657 aa12.15□□□□□ -0.46
USP6-205ENST00000574788 TXLNBQ8N3L3 684 aa12.15□□□□□ -0.46
USP6-205ENST00000574788 DHX16O60231 1041 aaKnown RBP12.15□□□□□ -0.46
USP6-205ENST00000574788 RILPL2Q969X0 211 aa12.15□□□□□ -0.46
USP6-205ENST00000574788 GOLGA6L7A0A1B0GV03 622 aa12.15□□□□□ -0.46
USP6-205ENST00000574788 ANKRD30AQ9BXX3 1397 aa12.15□□□□□ -0.46
USP6-205ENST00000574788 RSPH4AQ5TD94 716 aa12.15□□□□□ -0.46
USP6-205ENST00000574788 GGT6Q6P531 493 aa12.15□□□□□ -0.46
USP6-205ENST00000574788 TTC5Q8N0Z6 440 aa12.15□□□□□ -0.46
USP6-205ENST00000574788 LUC7LQ9NQ29 371 aaKnown RBP12.15□□□□□ -0.46
USP6-205ENST00000574788 ERLIN2O94905 339 aa12.15□□□□□ -0.47
USP6-205ENST00000574788 APPP05067 770 aa12.15□□□□□ -0.47
USP6-205ENST00000574788 MNS1Q8NEH6 495 aa12.15□□□□□ -0.47
USP6-205ENST00000574788 AEBP2Q6ZN18 517 aaPredicted RBP12.14□□□□□ -0.47
USP6-205ENST00000574788 NOL8Q76FK4 1167 aaKnown RBP12.14□□□□□ -0.47
USP6-205ENST00000574788 OLFM4Q6UX06 510 aa12.14□□□□□ -0.47
USP6-205ENST00000574788 PAF1Q8N7H5 531 aa12.13□□□□□ -0.47
USP6-205ENST00000574788 EVA1CP58658 441 aa12.13□□□□□ -0.47
USP6-205ENST00000574788 ZFYVE27Q5T4F4 411 aa12.13□□□□□ -0.47
USP6-205ENST00000574788 CCDC73Q6ZRK6 1079 aa12.13□□□□□ -0.47
USP6-205ENST00000574788 RAD21O60216 631 aa12.13□□□□□ -0.47
USP6-205ENST00000574788 TEFQ10587 303 aa12.13□□□□□ -0.47
USP6-205ENST00000574788 BICD2Q8TD16 824 aa12.12□□□□□ -0.47
USP6-205ENST00000574788 FMN1Q68DA7 1419 aa12.12□□□□□ -0.47
USP6-205ENST00000574788 EZRP15311 586 aaKnown RBP12.12□□□□□ -0.47
USP6-205ENST00000574788 CHMP5Q9NZZ3 219 aa12.12□□□□□ -0.47
USP6-205ENST00000574788 CCDC66A2RUB6 948 aa12.12□□□□□ -0.47
USP6-205ENST00000574788 NFXL1Q6ZNB6 911 aa12.11□□□□□ -0.47
USP6-205ENST00000574788 INCENPQ9NQS7 918 aa12.11□□□□□ -0.47
USP6-205ENST00000574788 PIP4K2AP48426 406 aaPredicted RBP12.11□□□□□ -0.47
USP6-205ENST00000574788 NUCB2P80303 420 aa12.11□□□□□ -0.47
USP6-205ENST00000574788 HSP90AB4PQ58FF6 505 aa12.11□□□□□ -0.47
USP6-205ENST00000574788 KIF15Q9NS87 1388 aa12.11□□□□□ -0.47
USP6-205ENST00000574788 FAM161AQ3B820 660 aa12.11□□□□□ -0.47
USP6-205ENST00000574788 SIN3AQ96ST3 1273 aa12.11□□□□□ -0.47
USP6-205ENST00000574788 KIF7Q2M1P5 1343 aa12.11□□□□□ -0.47
USP6-205ENST00000574788 GOLGA6L10A6NI86 522 aa12.11□□□□□ -0.47
USP6-205ENST00000574788 PKD2Q13563 968 aa12.11□□□□□ -0.47
USP6-205ENST00000574788 SYCP1Q15431 976 aa12.1□□□□□ -0.47
USP6-205ENST00000574788 EFCAB2Q5VUJ9 269 aa12.1□□□□□ -0.47
USP6-205ENST00000574788 ERC2O15083 957 aa12.1□□□□□ -0.47
USP6-205ENST00000574788 RALYLQ86SE5 291 aaKnown RBP12.1□□□□□ -0.47
USP6-205ENST00000574788 IFIT2P09913 472 aaKnown RBP12.1□□□□□ -0.47
USP6-205ENST00000574788 SMARCE1Q969G3 411 aa12.1□□□□□ -0.47
USP6-205ENST00000574788 NUP155O75694 1391 aa12.1□□□□□ -0.47
USP6-205ENST00000574788 AAMPQ13685 434 aa12.1□□□□□ -0.47
USP6-205ENST00000574788 ANKRD45Q5TZF3 282 aa12.1□□□□□ -0.47
USP6-205ENST00000574788 TXLNAP40222 546 aa12.09□□□□□ -0.47
USP6-205ENST00000574788 DESP17661 470 aa12.09□□□□□ -0.47
USP6-205ENST00000574788 GSE1Q14687 1217 aa12.09□□□□□ -0.47
USP6-205ENST00000574788 SEPT7Q16181 437 aaKnown RBP12.09□□□□□ -0.47
USP6-205ENST00000574788 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.09□□□□□ -0.47
USP6-205ENST00000574788 SART3Q15020 963 aaKnown RBP12.09□□□□□ -0.47
USP6-205ENST00000574788 LETM1O95202 739 aaPredicted RBP12.09□□□□□ -0.47
USP6-205ENST00000574788 E9PSI1 815 aa12.08□□□□□ -0.48
USP6-205ENST00000574788 ZKSCAN2Q63HK3 967 aa12.08□□□□□ -0.48
USP6-205ENST00000574788 TRIM21P19474 475 aaKnown RBP12.08□□□□□ -0.48
USP6-205ENST00000574788 DDX19BQ9UMR2 479 aa12.08□□□□□ -0.48
USP6-205ENST00000574788 CCDC18Q5T9S5 1454 aa12.07□□□□□ -0.48
USP6-205ENST00000574788 RBM33Q96EV2 1170 aaKnown RBP12.07□□□□□ -0.48
USP6-205ENST00000574788 IFT57Q9NWB7 429 aa12.07□□□□□ -0.48
USP6-205ENST00000574788 HSPA5P11021 654 aaKnown RBP12.07□□□□□ -0.48
USP6-205ENST00000574788 SLC3A2P08195 630 aaKnown RBP12.07□□□□□ -0.48
USP6-205ENST00000574788 PDCP20941 246 aa12.07□□□□□ -0.48
USP6-205ENST00000574788 RABEP1Q15276 862 aa12.07□□□□□ -0.48
USP6-205ENST00000574788 G3BP1Q13283 466 aaKnown RBP eCLIP12.07□□□□□ -0.48
USP6-205ENST00000574788 COG3Q96JB2 828 aa12.07□□□□□ -0.48
USP6-205ENST00000574788 NINLQ9Y2I6 1382 aa12.06□□□□□ -0.48
USP6-205ENST00000574788 BAZ1AQ9NRL2 1556 aaPredicted RBP12.06□□□□□ -0.48
USP6-205ENST00000574788 ANO2Q9NQ90 1003 aa12.06□□□□□ -0.48
USP6-205ENST00000574788 SMC3Q9UQE7 1217 aa12.06□□□□□ -0.48
USP6-205ENST00000574788 MSH5O43196 834 aa12.06□□□□□ -0.48
USP6-205ENST00000574788 FOXD4L5Q5VV16 416 aaPredicted RBP12.06□□□□□ -0.48
USP6-205ENST00000574788 FOXD4L4Q8WXT5 416 aaPredicted RBP12.06□□□□□ -0.48
USP6-205ENST00000574788 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.06□□□□□ -0.48
USP6-205ENST00000574788 NEFHP12036 1026 aa12.06□□□□□ -0.48
USP6-205ENST00000574788 PSMA5P28066 241 aa12.06□□□□□ -0.48
USP6-205ENST00000574788 FILIP1LQ4L180 1135 aa12.06□□□□□ -0.48
USP6-205ENST00000574788 CCAR1Q8IX12 1150 aaKnown RBP12.06□□□□□ -0.48
USP6-205ENST00000574788 FOXD4L1Q9NU39 408 aa12.06□□□□□ -0.48
USP6-205ENST00000574788 LEKR1Q6ZMV7 388 aa12.06□□□□□ -0.48
USP6-205ENST00000574788 INTS3Q68E01 1043 aaKnown RBP12.05□□□□□ -0.48
USP6-205ENST00000574788 CLUAP1Q96AJ1 413 aa12.05□□□□□ -0.48
USP6-205ENST00000574788 EVC2Q86UK5 1308 aa12.05□□□□□ -0.48
USP6-205ENST00000574788 FAM43AQ8N2R8 423 aa12.04□□□□□ -0.48
USP6-205ENST00000574788 ZNHIT6Q9NWK9 470 aaKnown RBP12.04□□□□□ -0.48
USP6-205ENST00000574788 MAGEC2Q9UBF1 373 aaPredicted RBP12.04□□□□□ -0.48
USP6-205ENST00000574788 DNAI2Q9GZS0 605 aa12.04□□□□□ -0.48
USP6-205ENST00000574788 IQCEQ6IPM2 695 aa12.04□□□□□ -0.48
USP6-205ENST00000574788 WASHC2CQ9Y4E1 1318 aa12.04□□□□□ -0.48
USP6-205ENST00000574788 HMGB2P26583 209 aaKnown RBP12.03□□□□□ -0.48
USP6-205ENST00000574788 CDK5RAP3Q96JB5 506 aa12.03□□□□□ -0.48
USP6-205ENST00000574788 GBP2P32456 591 aaPredicted RBP12.03□□□□□ -0.48
USP6-205ENST00000574788 USP8P40818 1118 aa12.03□□□□□ -0.48
USP6-205ENST00000574788 TMEM132AQ24JP5 1023 aa12.03□□□□□ -0.48
USP6-205ENST00000574788 CARMIL1Q5VZK9 1371 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms