RNA–Protein interactions for RNA: ENST00000573924.1

RPA1-205, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 574 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-205ENST00000573924 VPS8Q8N3P4 1428 aa11.27□□□□□ -0.6
RPA1-205ENST00000573924 STRCP1A6NGW2 1772 aa11.27□□□□□ -0.61
RPA1-205ENST00000573924 PRDM15P57071 1507 aaPredicted RBP11.27□□□□□ -0.61
RPA1-205ENST00000573924 LTKP29376 864 aa11.27□□□□□ -0.61
RPA1-205ENST00000573924 CEP152O94986 1710 aa11.26□□□□□ -0.61
RPA1-205ENST00000573924 EFCAB6Q5THR3 1501 aa11.26□□□□□ -0.61
RPA1-205ENST00000573924 SLC52A1Q9NWF4 448 aa11.26□□□□□ -0.61
RPA1-205ENST00000573924 TMEM94Q12767 1356 aa11.26□□□□□ -0.61
RPA1-205ENST00000573924 NKTRP30414 1462 aaKnown RBP11.25□□□□□ -0.61
RPA1-205ENST00000573924 MROH1Q8NDA8 1641 aa11.24□□□□□ -0.61
RPA1-205ENST00000573924 RRP7BPQ9NSQ0 103 aa11.24□□□□□ -0.61
RPA1-205ENST00000573924 CFAP65Q6ZU64 1925 aaKnown RBP11.24□□□□□ -0.61
RPA1-205ENST00000573924 ANKRD30AQ9BXX3 1397 aa11.24□□□□□ -0.61
RPA1-205ENST00000573924 SLAIN2Q9P270 581 aa11.23□□□□□ -0.61
RPA1-205ENST00000573924 RGS17Q9UGC6 210 aaPredicted RBP11.23□□□□□ -0.61
RPA1-205ENST00000573924 JCADQ9P266 1359 aa11.23□□□□□ -0.61
RPA1-205ENST00000573924 PIK3C2BO00750 1634 aa11.22□□□□□ -0.61
RPA1-205ENST00000573924 PPP1R15AO75807 674 aaPredicted RBP11.22□□□□□ -0.61
RPA1-205ENST00000573924 IDI1Q13907 227 aa11.21□□□□□ -0.61
RPA1-205ENST00000573924 ZNF772Q68DY9 489 aaPredicted RBP11.21□□□□□ -0.61
RPA1-205ENST00000573924 C14orf37Q86TY3 774 aa11.21□□□□□ -0.61
RPA1-205ENST00000573924 SLC26A8Q96RN1 970 aa11.21□□□□□ -0.61
RPA1-205ENST00000573924 ROBO1Q9Y6N7 1651 aa11.2□□□□□ -0.62
RPA1-205ENST00000573924 LMTK2Q8IWU2 1503 aa11.2□□□□□ -0.62
RPA1-205ENST00000573924 NCOA3Q9Y6Q9 1424 aa11.2□□□□□ -0.62
RPA1-205ENST00000573924 SPATA31A6Q5VVP1 1343 aa11.2□□□□□ -0.62
RPA1-205ENST00000573924 VASPP50552 380 aaPredicted RBP11.2□□□□□ -0.62
RPA1-205ENST00000573924 MEX3CQ5U5Q3 659 aaKnown RBP11.2□□□□□ -0.62
RPA1-205ENST00000573924 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.2□□□□□ -0.62
RPA1-205ENST00000573924 RPRD2Q5VT52 1461 aaKnown RBP11.19□□□□□ -0.62
RPA1-205ENST00000573924 XIRP1Q702N8 1843 aaKnown RBP11.19□□□□□ -0.62
RPA1-205ENST00000573924 POTEAQ6S8J7 498 aa11.19□□□□□ -0.62
RPA1-205ENST00000573924 CADPS2Q86UW7 1296 aa11.19□□□□□ -0.62
RPA1-205ENST00000573924 CROCC2H7BZ55 1655 aa11.19□□□□□ -0.62
RPA1-205ENST00000573924 ADGRB3O60242 1522 aa11.19□□□□□ -0.62
RPA1-205ENST00000573924 ABCC5O15440 1437 aa11.18□□□□□ -0.62
RPA1-205ENST00000573924 DAPK1P53355 1430 aa11.18□□□□□ -0.62
RPA1-205ENST00000573924 MKRN4PQ13434 485 aaPredicted RBP11.18□□□□□ -0.62
RPA1-205ENST00000573924 FGD6Q6ZV73 1430 aa11.18□□□□□ -0.62
RPA1-205ENST00000573924 TET3O43151 1660 aa11.17□□□□□ -0.62
RPA1-205ENST00000573924 PTPN23Q9H3S7 1636 aa11.17□□□□□ -0.62
RPA1-205ENST00000573924 NWD1Q149M9 1564 aa11.17□□□□□ -0.62
RPA1-205ENST00000573924 ATF3P18847 181 aa11.17□□□□□ -0.62
RPA1-205ENST00000573924 PLCB2Q00722 1185 aa11.17□□□□□ -0.62
RPA1-205ENST00000573924 KANK4Q5T7N3 995 aaPredicted RBP11.17□□□□□ -0.62
RPA1-205ENST00000573924 PLEKHG1Q9ULL1 1385 aa11.16□□□□□ -0.62
RPA1-205ENST00000573924 PHLPP1O60346 1717 aa11.16□□□□□ -0.62
RPA1-205ENST00000573924 TBX22Q9Y458 520 aa11.16□□□□□ -0.62
RPA1-205ENST00000573924 NOS1P29475 1434 aa11.16□□□□□ -0.62
RPA1-205ENST00000573924 C19orf44Q9H6X5 657 aa11.15□□□□□ -0.62
RPA1-205ENST00000573924 PIK3R4Q99570 1358 aa11.15□□□□□ -0.63
RPA1-205ENST00000573924 CHIC2Q9UKJ5 165 aa11.14□□□□□ -0.63
RPA1-205ENST00000573924 RIMS2Q9UQ26 1411 aa11.12□□□□□ -0.63
RPA1-205ENST00000573924 RXRBP28702 533 aa11.12□□□□□ -0.63
RPA1-205ENST00000573924 RBM33Q96EV2 1170 aaKnown RBP11.12□□□□□ -0.63
RPA1-205ENST00000573924 DIP2AQ14689 1571 aa11.11□□□□□ -0.63
RPA1-205ENST00000573924 ANKRD50Q9ULJ7 1429 aa11.11□□□□□ -0.63
RPA1-205ENST00000573924 CHGAP10645 457 aaKnown RBP11.11□□□□□ -0.63
RPA1-205ENST00000573924 CHD2O14647 1828 aaKnown RBP11.1□□□□□ -0.63
RPA1-205ENST00000573924 ADGRL2O95490 1459 aa11.1□□□□□ -0.63
RPA1-205ENST00000573924 ZFYVE9O95405 1425 aa11.09□□□□□ -0.63
RPA1-205ENST00000573924 FAM50AQ14320 339 aaKnown RBP11.09□□□□□ -0.63
RPA1-205ENST00000573924 CDK12Q9NYV4 1490 aaPredicted RBP11.08□□□□□ -0.64
RPA1-205ENST00000573924 UPF1Q92900 1129 aaKnown RBP eCLIP11.08□□□□□ -0.64
RPA1-205ENST00000573924 TRIM52Q96A61 297 aa11.08□□□□□ -0.64
RPA1-205ENST00000573924 ZBTB12Q9Y330 459 aaPredicted RBP11.08□□□□□ -0.64
RPA1-205ENST00000573924 COL16A1Q07092 1604 aaPredicted RBP11.08□□□□□ -0.64
RPA1-205ENST00000573924 AHDC1Q5TGY3 1603 aaPredicted RBP11.08□□□□□ -0.64
RPA1-205ENST00000573924 DCCP43146 1447 aa11.08□□□□□ -0.64
RPA1-205ENST00000573924 LRRC59Q96AG4 307 aaKnown RBP11.07□□□□□ -0.64
RPA1-205ENST00000573924 TRPM2O94759 1503 aa11.07□□□□□ -0.64
RPA1-205ENST00000573924 SHPRHQ149N8 1683 aa11.07□□□□□ -0.64
RPA1-205ENST00000573924 TMEM131LA2VDJ0 1609 aa11.06□□□□□ -0.64
RPA1-205ENST00000573924 GCC2Q8IWJ2 1684 aa11.06□□□□□ -0.64
RPA1-205ENST00000573924 IFNLR1Q8IU57 520 aaPredicted RBP11.06□□□□□ -0.64
RPA1-205ENST00000573924 NGLY1Q96IV0 654 aa11.06□□□□□ -0.64
RPA1-205ENST00000573924 LOC105371045A0A1W2PR82 267 aa11.05□□□□□ -0.64
RPA1-205ENST00000573924 NUTM2BA6NNL0 878 aaPredicted RBP11.05□□□□□ -0.64
RPA1-205ENST00000573924 NUTM2EB1AL46 878 aaPredicted RBP11.05□□□□□ -0.64
RPA1-205ENST00000573924 POLA2Q14181 598 aa11.05□□□□□ -0.64
RPA1-205ENST00000573924 NUTM2AQ8IVF1 878 aaPredicted RBP11.05□□□□□ -0.64
RPA1-205ENST00000573924 AMOTL2Q9Y2J4 779 aa11.05□□□□□ -0.64
RPA1-205ENST00000573924 SETD1AO15047 1707 aaKnown RBP11.04□□□□□ -0.64
RPA1-205ENST00000573924 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.04□□□□□ -0.64
RPA1-205ENST00000573924 RBM6P78332 1123 aaKnown RBP11.03□□□□□ -0.64
RPA1-205ENST00000573924 BRINP3Q76B58 766 aa11.03□□□□□ -0.64
RPA1-205ENST00000573924 AFF2P51816 1311 aa11.03□□□□□ -0.64
RPA1-205ENST00000573924 LRP6O75581 1613 aa11.02□□□□□ -0.64
RPA1-205ENST00000573924 ADAMTS13Q76LX8 1427 aa11.02□□□□□ -0.64
RPA1-205ENST00000573924 SETD5Q9C0A6 1442 aa11.01□□□□□ -0.65
RPA1-205ENST00000573924 MYO5BQ9ULV0 1848 aa11.01□□□□□ -0.65
RPA1-205ENST00000573924 ROCK1Q13464 1354 aa11.01□□□□□ -0.65
RPA1-205ENST00000573924 UNC13BO14795 1591 aa11□□□□□ -0.65
RPA1-205ENST00000573924 ZNF326Q5BKZ1 582 aaKnown RBP11□□□□□ -0.65
RPA1-205ENST00000573924 NUTM2DQ5VT03 806 aaPredicted RBP11□□□□□ -0.65
RPA1-205ENST00000573924 C8orf37Q96NL8 207 aa11□□□□□ -0.65
RPA1-205ENST00000573924 QTRT2Q9H974 415 aaKnown RBP11□□□□□ -0.65
RPA1-205ENST00000573924 NUP155O75694 1391 aa11□□□□□ -0.65
RPA1-205ENST00000573924 ASXL1Q8IXJ9 1541 aa10.99□□□□□ -0.65
RPA1-205ENST00000573924 ATAD2Q6PL18 1390 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms