RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 SYNMO15061 1565 aa25.03■■□□□ 1.6
SCARF1-206ENST00000573852 SCAF11Q99590 1463 aaKnown RBP25.03■■□□□ 1.6
SCARF1-206ENST00000573852 TRPM2O94759 1503 aa25.02■■□□□ 1.6
SCARF1-206ENST00000573852 ASXL1Q8IXJ9 1541 aa25.01■■□□□ 1.59
SCARF1-206ENST00000573852 GOLGA2Q08379 1002 aa25.01■■□□□ 1.59
SCARF1-206ENST00000573852 CDCA8Q53HL2 280 aa25.01■■□□□ 1.59
SCARF1-206ENST00000573852 SCAPERQ9BY12 1400 aa25■■□□□ 1.59
SCARF1-206ENST00000573852 CEP152O94986 1710 aa25■■□□□ 1.59
SCARF1-206ENST00000573852 CLTCL1P53675 1640 aa24.99■■□□□ 1.59
SCARF1-206ENST00000573852 ZCCHC11Q5TAX3 1644 aaKnown RBP24.99■■□□□ 1.59
SCARF1-206ENST00000573852 MYOM1P52179 1685 aa24.98■■□□□ 1.59
SCARF1-206ENST00000573852 PTPRTO14522 1441 aa24.98■■□□□ 1.59
SCARF1-206ENST00000573852 NEFMP07197 916 aa24.98■■□□□ 1.59
SCARF1-206ENST00000573852 SPAG9O60271 1321 aaKnown RBP24.98■■□□□ 1.59
SCARF1-206ENST00000573852 PIK3C2GO75747 1445 aa24.98■■□□□ 1.59
SCARF1-206ENST00000573852 CENPQQ7L2Z9 268 aaPredicted RBP24.97■■□□□ 1.59
SCARF1-206ENST00000573852 AFAP1Q8N556 730 aa24.97■■□□□ 1.59
SCARF1-206ENST00000573852 SLFN5Q08AF3 891 aa24.97■■□□□ 1.59
SCARF1-206ENST00000573852 CLASP1Q7Z460 1538 aa24.96■■□□□ 1.59
SCARF1-206ENST00000573852 CCDC146Q8IYE0 955 aa24.95■■□□□ 1.58
SCARF1-206ENST00000573852 STAC3Q96MF2 364 aa24.95■■□□□ 1.58
SCARF1-206ENST00000573852 NPC1L1Q9UHC9 1359 aa24.93■■□□□ 1.58
SCARF1-206ENST00000573852 DDRGK1Q96HY6 314 aa24.93■■□□□ 1.58
SCARF1-206ENST00000573852 USP35Q9P2H5 1018 aa24.93■■□□□ 1.58
SCARF1-206ENST00000573852 TRMT2AQ8IZ69 625 aaKnown RBP24.92■■□□□ 1.58
SCARF1-206ENST00000573852 ZFYVE16Q7Z3T8 1539 aa24.92■■□□□ 1.58
SCARF1-206ENST00000573852 SPINK5Q9NQ38 1064 aaPredicted RBP24.92■■□□□ 1.58
SCARF1-206ENST00000573852 RTEL1-TNFRSF6BF6WH68 1400 aa24.92■■□□□ 1.58
SCARF1-206ENST00000573852 PPM1GO15355 546 aaPredicted RBP24.91■■□□□ 1.58
SCARF1-206ENST00000573852 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.91■■□□□ 1.58
SCARF1-206ENST00000573852 DEPDC5O75140 1603 aa24.9■■□□□ 1.58
SCARF1-206ENST00000573852 APAF1O14727 1248 aa24.89■■□□□ 1.58
SCARF1-206ENST00000573852 EIF3AQ14152 1382 aaKnown RBP24.89■■□□□ 1.57
SCARF1-206ENST00000573852 TET3O43151 1660 aa24.88■■□□□ 1.57
SCARF1-206ENST00000573852 KDM5AP29375 1690 aaKnown RBP24.88■■□□□ 1.57
SCARF1-206ENST00000573852 UHRF1BP1LA0JNW5 1464 aa24.86■■□□□ 1.57
SCARF1-206ENST00000573852 C8orf34Q49A92 452 aa24.86■■□□□ 1.57
SCARF1-206ENST00000573852 KIAA1210Q9ULL0 1709 aa24.86■■□□□ 1.57
SCARF1-206ENST00000573852 FAM161AQ3B820 660 aa24.85■■□□□ 1.57
SCARF1-206ENST00000573852 CFAP70Q5T0N1 1121 aa24.85■■□□□ 1.57
SCARF1-206ENST00000573852 SLC4A3P48751 1232 aa24.84■■□□□ 1.57
SCARF1-206ENST00000573852 NKTRP30414 1462 aaKnown RBP24.84■■□□□ 1.57
SCARF1-206ENST00000573852 BCAR3O75815 825 aa24.83■■□□□ 1.57
SCARF1-206ENST00000573852 ERVK-7P63135 1459 aa24.83■■□□□ 1.57
SCARF1-206ENST00000573852 CARD14Q9BXL6 1004 aa24.83■■□□□ 1.57
SCARF1-206ENST00000573852 DMRT2Q9Y5R5 561 aa24.82■■□□□ 1.56
SCARF1-206ENST00000573852 VWDEQ8N2E2 1590 aa24.82■■□□□ 1.56
SCARF1-206ENST00000573852 KANK1Q14678 1352 aa24.81■■□□□ 1.56
SCARF1-206ENST00000573852 ADGRF5Q8IZF2 1346 aa24.8■■□□□ 1.56
SCARF1-206ENST00000573852 KIF3BO15066 747 aa24.8■■□□□ 1.56
SCARF1-206ENST00000573852 RGS3P49796 1198 aa24.8■■□□□ 1.56
SCARF1-206ENST00000573852 ARAP3Q8WWN8 1544 aa24.8■■□□□ 1.56
SCARF1-206ENST00000573852 UGGT1Q9NYU2 1555 aa24.8■■□□□ 1.56
SCARF1-206ENST00000573852 ABCA6Q8N139 1617 aa24.79■■□□□ 1.56
SCARF1-206ENST00000573852 MAP3K4Q9Y6R4 1608 aa24.79■■□□□ 1.56
SCARF1-206ENST00000573852 E9PSI1 815 aa24.79■■□□□ 1.56
SCARF1-206ENST00000573852 PRKCSHP14314 528 aaPredicted RBP24.79■■□□□ 1.56
SCARF1-206ENST00000573852 ATP7AQ04656 1500 aa24.78■■□□□ 1.56
SCARF1-206ENST00000573852 NEURL4Q96JN8 1562 aa24.77■■□□□ 1.56
SCARF1-206ENST00000573852 INO80Q9ULG1 1556 aaPredicted RBP24.76■■□□□ 1.55
SCARF1-206ENST00000573852 MYOM2P54296 1465 aa24.75■■□□□ 1.55
SCARF1-206ENST00000573852 SLC24A1O60721 1099 aa24.74■■□□□ 1.55
SCARF1-206ENST00000573852 NFKBIBQ15653 356 aa24.74■■□□□ 1.55
SCARF1-206ENST00000573852 DAXXQ9UER7 740 aaPredicted RBP24.73■■□□□ 1.55
SCARF1-206ENST00000573852 MROH1Q8NDA8 1641 aa24.73■■□□□ 1.55
SCARF1-206ENST00000573852 IGHDP01880 384 aa24.72■■□□□ 1.55
SCARF1-206ENST00000573852 IL27Q8NEV9 243 aa24.72■■□□□ 1.55
SCARF1-206ENST00000573852 FANCAO15360 1455 aa24.72■■□□□ 1.55
SCARF1-206ENST00000573852 KIF1BO60333 1816 aa24.7■■□□□ 1.55
SCARF1-206ENST00000573852 NGEFQ8N5V2 710 aa24.7■■□□□ 1.54
SCARF1-206ENST00000573852 ABCA9Q8IUA7 1624 aa24.69■■□□□ 1.54
SCARF1-206ENST00000573852 IFT172Q9UG01 1749 aa24.69■■□□□ 1.54
SCARF1-206ENST00000573852 WWC1Q8IX03 1113 aa24.69■■□□□ 1.54
SCARF1-206ENST00000573852 POLR3AO14802 1390 aaPredicted RBP24.69■■□□□ 1.54
SCARF1-206ENST00000573852 MROH2AA6NES4 1674 aa24.67■■□□□ 1.54
SCARF1-206ENST00000573852 CENPJQ9HC77 1338 aaPredicted RBP24.67■■□□□ 1.54
SCARF1-206ENST00000573852 PDE3AQ14432 1141 aa24.67■■□□□ 1.54
SCARF1-206ENST00000573852 MYO3AQ8NEV4 1616 aa24.66■■□□□ 1.54
SCARF1-206ENST00000573852 CGNL1Q0VF96 1302 aa24.66■■□□□ 1.54
SCARF1-206ENST00000573852 PANK1Q8TE04 598 aa24.65■■□□□ 1.54
SCARF1-206ENST00000573852 NRXN1Q9ULB1 1477 aa24.65■■□□□ 1.54
SCARF1-206ENST00000573852 SBNO2Q9Y2G9 1366 aa24.65■■□□□ 1.54
SCARF1-206ENST00000573852 EFCAB6Q5THR3 1501 aa24.65■■□□□ 1.54
SCARF1-206ENST00000573852 ADGRL1O94910 1474 aa24.65■■□□□ 1.54
SCARF1-206ENST00000573852 GSE1Q14687 1217 aa24.64■■□□□ 1.53
SCARF1-206ENST00000573852 COG6Q9Y2V7 657 aa24.64■■□□□ 1.53
SCARF1-206ENST00000573852 SHPRHQ149N8 1683 aa24.62■■□□□ 1.53
SCARF1-206ENST00000573852 CLUAP1Q96AJ1 413 aa24.62■■□□□ 1.53
SCARF1-206ENST00000573852 NSD3Q9BZ95 1437 aa24.62■■□□□ 1.53
SCARF1-206ENST00000573852 TNNT2P45379 298 aaPredicted RBP24.62■■□□□ 1.53
SCARF1-206ENST00000573852 PPRC1Q5VV67 1664 aaKnown RBP24.62■■□□□ 1.53
SCARF1-206ENST00000573852 MORC1Q86VD1 984 aa24.61■■□□□ 1.53
SCARF1-206ENST00000573852 NOS1P29475 1434 aa24.61■■□□□ 1.53
SCARF1-206ENST00000573852 CANXP27824 592 aaKnown RBP24.61■■□□□ 1.53
SCARF1-206ENST00000573852 NEUROD2Q15784 382 aa24.61■■□□□ 1.53
SCARF1-206ENST00000573852 RRP7AQ9Y3A4 280 aaKnown RBP24.6■■□□□ 1.53
SCARF1-206ENST00000573852 USP19O94966 1318 aa24.6■■□□□ 1.53
SCARF1-206ENST00000573852 VIRMAQ69YN4 1812 aaKnown RBP24.6■■□□□ 1.53
SCARF1-206ENST00000573852 NINLQ9Y2I6 1382 aa24.6■■□□□ 1.53
SCARF1-206ENST00000573852 SLC12A5Q9H2X9 1139 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms