RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 MINK1Q8N4C8 1332 aaPredicted RBP18.95■□□□□ 0.62
TVP23A-207ENST00000573360 ZMYM3Q14202 1370 aa18.94■□□□□ 0.62
TVP23A-207ENST00000573360 PPRC1Q5VV67 1664 aaKnown RBP18.94■□□□□ 0.62
TVP23A-207ENST00000573360 MROH1Q8NDA8 1641 aa18.93■□□□□ 0.62
TVP23A-207ENST00000573360 EFCAB6Q5THR3 1501 aa18.93■□□□□ 0.62
TVP23A-207ENST00000573360 UHRF1BP1Q6BDS2 1440 aa18.93■□□□□ 0.62
TVP23A-207ENST00000573360 TESK2Q96S53 571 aa18.93■□□□□ 0.62
TVP23A-207ENST00000573360 CNTLNQ9NXG0 1405 aa18.92■□□□□ 0.62
TVP23A-207ENST00000573360 RICTORQ6R327 1708 aa18.92■□□□□ 0.62
TVP23A-207ENST00000573360 SRPK2P78362 688 aaKnown RBP18.92■□□□□ 0.62
TVP23A-207ENST00000573360 SLC26A8Q96RN1 970 aa18.92■□□□□ 0.62
TVP23A-207ENST00000573360 TRPM2O94759 1503 aa18.91■□□□□ 0.62
TVP23A-207ENST00000573360 TET3O43151 1660 aa18.91■□□□□ 0.62
TVP23A-207ENST00000573360 KNSTRNQ9Y448 316 aa18.89■□□□□ 0.61
TVP23A-207ENST00000573360 IRX6P78412 446 aaPredicted RBP18.89■□□□□ 0.61
TVP23A-207ENST00000573360 CABP2Q9NPB3 220 aa18.89■□□□□ 0.61
TVP23A-207ENST00000573360 CENPJQ9HC77 1338 aaPredicted RBP18.88■□□□□ 0.61
TVP23A-207ENST00000573360 WAPLQ7Z5K2 1190 aa18.87■□□□□ 0.61
TVP23A-207ENST00000573360 KIF13AQ9H1H9 1805 aa18.87■□□□□ 0.61
TVP23A-207ENST00000573360 PRAM1Q96QH2 718 aa18.87■□□□□ 0.61
TVP23A-207ENST00000573360 SPHKAPQ2M3C7 1700 aa18.86■□□□□ 0.61
TVP23A-207ENST00000573360 C14orf93Q9H972 538 aaKnown RBP18.86■□□□□ 0.61
TVP23A-207ENST00000573360 TXNDC2Q86VQ3 553 aa18.86■□□□□ 0.61
TVP23A-207ENST00000573360 SLC12A5Q9H2X9 1139 aa18.86■□□□□ 0.61
TVP23A-207ENST00000573360 RNF17Q9BXT8 1623 aaKnown RBP18.85■□□□□ 0.61
TVP23A-207ENST00000573360 PLEKHG5O94827 1062 aa18.85■□□□□ 0.61
TVP23A-207ENST00000573360 RBM33Q96EV2 1170 aaKnown RBP18.84■□□□□ 0.61
TVP23A-207ENST00000573360 DEPDC5O75140 1603 aa18.84■□□□□ 0.61
TVP23A-207ENST00000573360 EIF2AK4Q9P2K8 1649 aaKnown RBP18.83■□□□□ 0.61
TVP23A-207ENST00000573360 CCER2I3L3R5 266 aa18.83■□□□□ 0.6
TVP23A-207ENST00000573360 EIF3AQ14152 1382 aaKnown RBP18.82■□□□□ 0.6
TVP23A-207ENST00000573360 VWDEQ8N2E2 1590 aa18.82■□□□□ 0.6
TVP23A-207ENST00000573360 CDCA8Q53HL2 280 aa18.81■□□□□ 0.6
TVP23A-207ENST00000573360 BCORL1Q5H9F3 1711 aa18.8■□□□□ 0.6
TVP23A-207ENST00000573360 STAC3Q96MF2 364 aa18.8■□□□□ 0.6
TVP23A-207ENST00000573360 RPGRIP1LQ68CZ1 1315 aa18.8■□□□□ 0.6
TVP23A-207ENST00000573360 TNRQ92752 1358 aa18.79■□□□□ 0.6
TVP23A-207ENST00000573360 SCAF11Q99590 1463 aaKnown RBP18.78■□□□□ 0.6
TVP23A-207ENST00000573360 EID1Q9Y6B2 187 aa18.78■□□□□ 0.6
TVP23A-207ENST00000573360 PPP6R1Q9UPN7 881 aa18.77■□□□□ 0.6
TVP23A-207ENST00000573360 CAMSAP1Q5T5Y3 1602 aa18.77■□□□□ 0.59
TVP23A-207ENST00000573360 GPRASP1Q5JY77 1395 aa18.76■□□□□ 0.59
TVP23A-207ENST00000573360 ERVK-7P63135 1459 aa18.76■□□□□ 0.59
TVP23A-207ENST00000573360 LTKP29376 864 aa18.76■□□□□ 0.59
TVP23A-207ENST00000573360 ZMYM4Q5VZL5 1548 aa18.75■□□□□ 0.59
TVP23A-207ENST00000573360 LMTK2Q8IWU2 1503 aa18.75■□□□□ 0.59
TVP23A-207ENST00000573360 KTN1Q86UP2 1357 aaKnown RBP18.75■□□□□ 0.59
TVP23A-207ENST00000573360 CLTCQ00610 1675 aaKnown RBP18.74■□□□□ 0.59
TVP23A-207ENST00000573360 HDGFP51858 240 aaKnown RBP18.74■□□□□ 0.59
TVP23A-207ENST00000573360 RIMS2Q9UQ26 1411 aa18.73■□□□□ 0.59
TVP23A-207ENST00000573360 TRPM1Q7Z4N2 1603 aa18.73■□□□□ 0.59
TVP23A-207ENST00000573360 SYNMO15061 1565 aa18.73■□□□□ 0.59
TVP23A-207ENST00000573360 KIF1BO60333 1816 aa18.73■□□□□ 0.59
TVP23A-207ENST00000573360 SOX12O15370 315 aa18.72■□□□□ 0.59
TVP23A-207ENST00000573360 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.72■□□□□ 0.59
TVP23A-207ENST00000573360 PPM1GO15355 546 aaPredicted RBP18.72■□□□□ 0.59
TVP23A-207ENST00000573360 SIGLEC1Q9BZZ2 1709 aa18.71■□□□□ 0.59
TVP23A-207ENST00000573360 NCKAP5LQ9HCH0 1330 aa18.71■□□□□ 0.59
TVP23A-207ENST00000573360 MROH2AA6NES4 1674 aa18.71■□□□□ 0.59
TVP23A-207ENST00000573360 ARHGAP31Q2M1Z3 1444 aa18.71■□□□□ 0.59
TVP23A-207ENST00000573360 EVC2Q86UK5 1308 aa18.71■□□□□ 0.58
TVP23A-207ENST00000573360 ARHGEF40Q8TER5 1519 aa18.7■□□□□ 0.58
TVP23A-207ENST00000573360 C14orf37Q86TY3 774 aa18.7■□□□□ 0.58
TVP23A-207ENST00000573360 MADDQ8WXG6 1647 aa18.69■□□□□ 0.58
TVP23A-207ENST00000573360 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.69■□□□□ 0.58
TVP23A-207ENST00000573360 PER1O15534 1290 aaPredicted RBP18.68■□□□□ 0.58
TVP23A-207ENST00000573360 CDK19Q9BWU1 502 aa18.68■□□□□ 0.58
TVP23A-207ENST00000573360 PIK3C2GO75747 1445 aa18.68■□□□□ 0.58
TVP23A-207ENST00000573360 ADGRB3O60242 1522 aa18.67■□□□□ 0.58
TVP23A-207ENST00000573360 CABP1Q9NZU7 370 aa18.67■□□□□ 0.58
TVP23A-207ENST00000573360 MORC1Q86VD1 984 aa18.67■□□□□ 0.58
TVP23A-207ENST00000573360 THEMISQ8N1K5 641 aaPredicted RBP18.67■□□□□ 0.58
TVP23A-207ENST00000573360 ANP32EQ9BTT0 268 aa18.67■□□□□ 0.58
TVP23A-207ENST00000573360 CARD14Q9BXL6 1004 aa18.66■□□□□ 0.58
TVP23A-207ENST00000573360 GGNBP2Q9H3C7 697 aa18.66■□□□□ 0.58
TVP23A-207ENST00000573360 RBM19Q9Y4C8 960 aaKnown RBP18.66■□□□□ 0.58
TVP23A-207ENST00000573360 MYBBP1AQ9BQG0 1328 aaKnown RBP18.66■□□□□ 0.58
TVP23A-207ENST00000573360 RALBP1Q15311 655 aa18.65■□□□□ 0.58
TVP23A-207ENST00000573360 PLEKHH1Q9ULM0 1364 aa18.65■□□□□ 0.58
TVP23A-207ENST00000573360 FBLN1P23142 703 aa18.64■□□□□ 0.58
TVP23A-207ENST00000573360 NLRP13Q86W25 1043 aa18.64■□□□□ 0.57
TVP23A-207ENST00000573360 METP08581 1390 aa18.64■□□□□ 0.57
TVP23A-207ENST00000573360 WDR43Q15061 677 aaKnown RBP eCLIP18.63■□□□□ 0.57
TVP23A-207ENST00000573360 NEUROD2Q15784 382 aa18.63■□□□□ 0.57
TVP23A-207ENST00000573360 CCDC146Q8IYE0 955 aa18.63■□□□□ 0.57
TVP23A-207ENST00000573360 A2ML1A8K2U0 1454 aa18.63■□□□□ 0.57
TVP23A-207ENST00000573360 AGLP35573 1532 aa18.63■□□□□ 0.57
TVP23A-207ENST00000573360 MYOM2P54296 1465 aa18.62■□□□□ 0.57
TVP23A-207ENST00000573360 ERICH6Q7L0X2 663 aa18.62■□□□□ 0.57
TVP23A-207ENST00000573360 HSPA2P54652 639 aa18.61■□□□□ 0.57
TVP23A-207ENST00000573360 PREX1Q8TCU6 1659 aa18.61■□□□□ 0.57
TVP23A-207ENST00000573360 PIK3C2BO00750 1634 aa18.6■□□□□ 0.57
TVP23A-207ENST00000573360 AMOTL2Q9Y2J4 779 aa18.6■□□□□ 0.57
TVP23A-207ENST00000573360 YTHDC2Q9H6S0 1430 aaKnown RBP18.6■□□□□ 0.57
TVP23A-207ENST00000573360 TMEM2Q9UHN6 1383 aa18.6■□□□□ 0.57
TVP23A-207ENST00000573360 PMFBP1Q8TBY8 1022 aa18.6■□□□□ 0.57
TVP23A-207ENST00000573360 PPP2R1AP30153 589 aa18.58■□□□□ 0.57
TVP23A-207ENST00000573360 AMER1Q5JTC6 1135 aaPredicted RBP18.58■□□□□ 0.57
TVP23A-207ENST00000573360 PNISRQ8TF01 805 aaKnown RBP18.58■□□□□ 0.57
TVP23A-207ENST00000573360 NEXMIFQ5QGS0 1516 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms