RNA–Protein interactions for RNA: ENST00000572503.1

NDE1-204, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 285 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-204ENST00000572503 KIF7Q2M1P5 1343 aa6.56□□□□□ -1.36
NDE1-204ENST00000572503 DCAF11Q8TEB1 546 aa6.56□□□□□ -1.36
NDE1-204ENST00000572503 STAC3Q96MF2 364 aa6.56□□□□□ -1.36
NDE1-204ENST00000572503 TMEM131LA2VDJ0 1609 aa6.56□□□□□ -1.36
NDE1-204ENST00000572503 SPATA31D1Q6ZQQ2 1576 aa6.56□□□□□ -1.36
NDE1-204ENST00000572503 SETBP1Q9Y6X0 1596 aa6.56□□□□□ -1.36
NDE1-204ENST00000572503 CLTCQ00610 1675 aaKnown RBP6.55□□□□□ -1.36
NDE1-204ENST00000572503 ARID4BQ4LE39 1312 aaPredicted RBP6.55□□□□□ -1.36
NDE1-204ENST00000572503 ERVK-7P63135 1459 aa6.54□□□□□ -1.36
NDE1-204ENST00000572503 ADGRB1O14514 1584 aa6.54□□□□□ -1.36
NDE1-204ENST00000572503 NBPF1Q3BBV0 1214 aa6.54□□□□□ -1.36
NDE1-204ENST00000572503 ROCK2O75116 1388 aaKnown RBP6.54□□□□□ -1.36
NDE1-204ENST00000572503 PIK3C2GO75747 1445 aa6.53□□□□□ -1.36
NDE1-204ENST00000572503 ZFYVE9O95405 1425 aa6.53□□□□□ -1.36
NDE1-204ENST00000572503 MYOM1P52179 1685 aa6.53□□□□□ -1.36
NDE1-204ENST00000572503 CCER2I3L3R5 266 aa6.53□□□□□ -1.36
NDE1-204ENST00000572503 RGL3Q3MIN7 710 aa6.53□□□□□ -1.36
NDE1-204ENST00000572503 TESK2Q96S53 571 aa6.53□□□□□ -1.36
NDE1-204ENST00000572503 CARD11Q9BXL7 1154 aa6.53□□□□□ -1.36
NDE1-204ENST00000572503 KDM2AQ9Y2K7 1162 aa6.53□□□□□ -1.36
NDE1-204ENST00000572503 SETD1AO15047 1707 aaKnown RBP6.53□□□□□ -1.36
NDE1-204ENST00000572503 SCAF11Q99590 1463 aaKnown RBP6.53□□□□□ -1.36
NDE1-204ENST00000572503 KDM5AP29375 1690 aaKnown RBP6.52□□□□□ -1.37
NDE1-204ENST00000572503 ASXL1Q8IXJ9 1541 aa6.52□□□□□ -1.37
NDE1-204ENST00000572503 GGT6Q6P531 493 aa6.52□□□□□ -1.37
NDE1-204ENST00000572503 MYT1LQ9UL68 1186 aa6.52□□□□□ -1.37
NDE1-204ENST00000572503 WASHC2CQ9Y4E1 1318 aa6.51□□□□□ -1.37
NDE1-204ENST00000572503 ARHGEF28Q8N1W1 1705 aaKnown RBP6.51□□□□□ -1.37
NDE1-204ENST00000572503 ST20-MTHFSA0A0A6YYL1 179 aa6.51□□□□□ -1.37
NDE1-204ENST00000572503 ZNF326Q5BKZ1 582 aaKnown RBP6.51□□□□□ -1.37
NDE1-204ENST00000572503 RPGRIP1LQ68CZ1 1315 aa6.5□□□□□ -1.37
NDE1-204ENST00000572503 ADGRF5Q8IZF2 1346 aa6.5□□□□□ -1.37
NDE1-204ENST00000572503 DISP3Q9P2K9 1392 aa6.5□□□□□ -1.37
NDE1-204ENST00000572503 SBNO2Q9Y2G9 1366 aa6.49□□□□□ -1.37
NDE1-204ENST00000572503 QRICH2Q9H0J4 1663 aa6.49□□□□□ -1.37
NDE1-204ENST00000572503 A2ML1A8K2U0 1454 aa6.48□□□□□ -1.37
NDE1-204ENST00000572503 NRXN3Q9Y4C0 1643 aa6.48□□□□□ -1.37
NDE1-204ENST00000572503 IDI1Q13907 227 aa6.48□□□□□ -1.37
NDE1-204ENST00000572503 PRKRIP1Q9H875 184 aaPredicted RBP6.48□□□□□ -1.37
NDE1-204ENST00000572503 SLC52A1Q9NWF4 448 aa6.48□□□□□ -1.37
NDE1-204ENST00000572503 UBR1Q8IWV7 1749 aa6.47□□□□□ -1.37
NDE1-204ENST00000572503 C3P01024 1663 aa6.47□□□□□ -1.37
NDE1-204ENST00000572503 ANP32CO43423 234 aa6.47□□□□□ -1.37
NDE1-204ENST00000572503 C14orf93Q9H972 538 aaKnown RBP6.47□□□□□ -1.37
NDE1-204ENST00000572503 FER1L4A9Z1Z3 1794 aa6.46□□□□□ -1.37
NDE1-204ENST00000572503 CENPBP07199 599 aaPredicted RBP6.46□□□□□ -1.38
NDE1-204ENST00000572503 CFAP70Q5T0N1 1121 aa6.46□□□□□ -1.38
NDE1-204ENST00000572503 ALKQ9UM73 1620 aa6.46□□□□□ -1.38
NDE1-204ENST00000572503 PTPRMP28827 1452 aa6.46□□□□□ -1.38
NDE1-204ENST00000572503 KNDC1Q76NI1 1749 aa6.45□□□□□ -1.38
NDE1-204ENST00000572503 PER1O15534 1290 aaPredicted RBP6.45□□□□□ -1.38
NDE1-204ENST00000572503 FBXO31Q5XUX0 539 aaPredicted RBP6.45□□□□□ -1.38
NDE1-204ENST00000572503 TULP4Q9NRJ4 1543 aa6.45□□□□□ -1.38
NDE1-204ENST00000572503 EIF3AQ14152 1382 aaKnown RBP6.44□□□□□ -1.38
NDE1-204ENST00000572503 ZMYM3Q14202 1370 aa6.44□□□□□ -1.38
NDE1-204ENST00000572503 KTN1Q86UP2 1357 aaKnown RBP6.44□□□□□ -1.38
NDE1-204ENST00000572503 PARD3Q8TEW0 1356 aa6.44□□□□□ -1.38
NDE1-204ENST00000572503 CCDC184Q52MB2 194 aa6.44□□□□□ -1.38
NDE1-204ENST00000572503 DLC1Q96QB1 1528 aa6.44□□□□□ -1.38
NDE1-204ENST00000572503 USP32Q8NFA0 1604 aa6.43□□□□□ -1.38
NDE1-204ENST00000572503 ADAMTSL3P82987 1691 aa6.43□□□□□ -1.38
NDE1-204ENST00000572503 YTHDC1Q96MU7 727 aaKnown RBP6.43□□□□□ -1.38
NDE1-204ENST00000572503 DNAJC5Q9H3Z4 198 aa6.43□□□□□ -1.38
NDE1-204ENST00000572503 SCAF1Q9H7N4 1312 aaKnown RBP6.43□□□□□ -1.38
NDE1-204ENST00000572503 RIMS2Q9UQ26 1411 aa6.42□□□□□ -1.38
NDE1-204ENST00000572503 NLRP1Q9C000 1473 aa6.42□□□□□ -1.38
NDE1-204ENST00000572503 ARHGAP23Q9P227 1491 aa6.42□□□□□ -1.38
NDE1-204ENST00000572503 VGFO15240 615 aaPredicted RBP6.42□□□□□ -1.38
NDE1-204ENST00000572503 TMF1P82094 1093 aa6.42□□□□□ -1.38
NDE1-204ENST00000572503 TNRQ92752 1358 aa6.42□□□□□ -1.38
NDE1-204ENST00000572503 NPC1L1Q9UHC9 1359 aa6.42□□□□□ -1.38
NDE1-204ENST00000572503 SLIT1O75093 1534 aa6.41□□□□□ -1.38
NDE1-204ENST00000572503 ZNF142P52746 1687 aaPredicted RBP6.41□□□□□ -1.38
NDE1-204ENST00000572503 LRPPRCP42704 1394 aaKnown RBP6.41□□□□□ -1.38
NDE1-204ENST00000572503 YTHDC2Q9H6S0 1430 aaKnown RBP6.41□□□□□ -1.38
NDE1-204ENST00000572503 MED14O60244 1454 aa6.41□□□□□ -1.38
NDE1-204ENST00000572503 CPS1P31327 1500 aa6.4□□□□□ -1.38
NDE1-204ENST00000572503 CHGAP10645 457 aaKnown RBP6.4□□□□□ -1.38
NDE1-204ENST00000572503 PUS7Q96PZ0 661 aaKnown RBP6.4□□□□□ -1.38
NDE1-204ENST00000572503 CENPJQ9HC77 1338 aaPredicted RBP6.4□□□□□ -1.39
NDE1-204ENST00000572503 BRD4O60885 1362 aaPredicted RBP6.4□□□□□ -1.39
NDE1-204ENST00000572503 TECPR2O15040 1411 aa6.4□□□□□ -1.39
NDE1-204ENST00000572503 RIMS1Q86UR5 1692 aaKnown RBP6.39□□□□□ -1.39
NDE1-204ENST00000572503 SLC24A1O60721 1099 aa6.39□□□□□ -1.39
NDE1-204ENST00000572503 MLECQ14165 292 aa6.39□□□□□ -1.39
NDE1-204ENST00000572503 RALBP1Q15311 655 aa6.39□□□□□ -1.39
NDE1-204ENST00000572503 AMER1Q5JTC6 1135 aaPredicted RBP6.39□□□□□ -1.39
NDE1-204ENST00000572503 PANK3Q9H999 370 aa6.39□□□□□ -1.39
NDE1-204ENST00000572503 INSRP06213 1382 aa6.39□□□□□ -1.39
NDE1-204ENST00000572503 TMEM2Q9UHN6 1383 aa6.39□□□□□ -1.39
NDE1-204ENST00000572503 ADAMTS13Q76LX8 1427 aa6.39□□□□□ -1.39
NDE1-204ENST00000572503 ANKRD26Q9UPS8 1709 aa6.39□□□□□ -1.39
NDE1-204ENST00000572503 CDCA8Q53HL2 280 aa6.38□□□□□ -1.39
NDE1-204ENST00000572503 TMEM132EQ6IEE7 984 aa6.38□□□□□ -1.39
NDE1-204ENST00000572503 MYBBP1AQ9BQG0 1328 aaKnown RBP6.38□□□□□ -1.39
NDE1-204ENST00000572503 ABCC11Q96J66 1382 aa6.38□□□□□ -1.39
NDE1-204ENST00000572503 ADGRB2O60241 1585 aa6.38□□□□□ -1.39
NDE1-204ENST00000572503 SETD1BQ9UPS6 1966 aaKnown RBP6.38□□□□□ -1.39
NDE1-204ENST00000572503 XRN1Q8IZH2 1706 aaKnown RBP6.37□□□□□ -1.39
NDE1-204ENST00000572503 DIP2AQ14689 1571 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms