RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 IDI1Q13907 227 aa28.64■■■□□ 2.18
CHRNE-202ENST00000572438 ADGRF5Q8IZF2 1346 aa28.64■■■□□ 2.18
CHRNE-202ENST00000572438 KIAA1210Q9ULL0 1709 aa28.63■■■□□ 2.17
CHRNE-202ENST00000572438 FBXO31Q5XUX0 539 aaPredicted RBP28.63■■■□□ 2.17
CHRNE-202ENST00000572438 PPLO60437 1756 aa28.6■■■□□ 2.17
CHRNE-202ENST00000572438 ESF1Q9H501 851 aaKnown RBP28.6■■■□□ 2.17
CHRNE-202ENST00000572438 ANP32CO43423 234 aa28.59■■■□□ 2.17
CHRNE-202ENST00000572438 SPATA31D1Q6ZQQ2 1576 aa28.58■■■□□ 2.17
CHRNE-202ENST00000572438 SCAF11Q99590 1463 aaKnown RBP28.55■■■□□ 2.16
CHRNE-202ENST00000572438 ZMYM3Q14202 1370 aa28.55■■■□□ 2.16
CHRNE-202ENST00000572438 IQGAP1P46940 1657 aa28.55■■■□□ 2.16
CHRNE-202ENST00000572438 NEXMIFQ5QGS0 1516 aa28.55■■■□□ 2.16
CHRNE-202ENST00000572438 TMEM131LA2VDJ0 1609 aa28.54■■■□□ 2.16
CHRNE-202ENST00000572438 PIK3C2GO75747 1445 aa28.54■■■□□ 2.16
CHRNE-202ENST00000572438 CFAP70Q5T0N1 1121 aa28.54■■■□□ 2.16
CHRNE-202ENST00000572438 TESK2Q96S53 571 aa28.51■■■□□ 2.15
CHRNE-202ENST00000572438 VGFO15240 615 aaPredicted RBP28.5■■■□□ 2.15
CHRNE-202ENST00000572438 ZFYVE9O95405 1425 aa28.49■■■□□ 2.15
CHRNE-202ENST00000572438 POLR3GLQ9BT43 218 aa28.48■■■□□ 2.15
CHRNE-202ENST00000572438 C14orf93Q9H972 538 aaKnown RBP28.48■■■□□ 2.15
CHRNE-202ENST00000572438 SETBP1Q9Y6X0 1596 aa28.47■■■□□ 2.15
CHRNE-202ENST00000572438 EIF3AQ14152 1382 aaKnown RBP28.47■■■□□ 2.15
CHRNE-202ENST00000572438 CCER2I3L3R5 266 aa28.45■■■□□ 2.14
CHRNE-202ENST00000572438 MYO5BQ9ULV0 1848 aa28.44■■■□□ 2.14
CHRNE-202ENST00000572438 STAG3Q9UJ98 1225 aa28.43■■■□□ 2.14
CHRNE-202ENST00000572438 YTHDC1Q96MU7 727 aaKnown RBP28.42■■■□□ 2.14
CHRNE-202ENST00000572438 DISP3Q9P2K9 1392 aa28.41■■■□□ 2.14
CHRNE-202ENST00000572438 TMF1P82094 1093 aa28.41■■■□□ 2.14
CHRNE-202ENST00000572438 NUTM2DQ5VT03 806 aaPredicted RBP28.41■■■□□ 2.14
CHRNE-202ENST00000572438 A2ML1A8K2U0 1454 aa28.4■■■□□ 2.14
CHRNE-202ENST00000572438 ADGRB1O14514 1584 aa28.4■■■□□ 2.14
CHRNE-202ENST00000572438 TNRQ92752 1358 aa28.39■■■□□ 2.13
CHRNE-202ENST00000572438 CENPBP07199 599 aaPredicted RBP28.34■■■□□ 2.13
CHRNE-202ENST00000572438 SLC24A1O60721 1099 aa28.32■■■□□ 2.12
CHRNE-202ENST00000572438 PRKRIP1Q9H875 184 aaPredicted RBP28.32■■■□□ 2.12
CHRNE-202ENST00000572438 MYO3AQ8NEV4 1616 aa28.31■■■□□ 2.12
CHRNE-202ENST00000572438 TMEM132EQ6IEE7 984 aa28.3■■■□□ 2.12
CHRNE-202ENST00000572438 RIMS2Q9UQ26 1411 aa28.3■■■□□ 2.12
CHRNE-202ENST00000572438 CDCA8Q53HL2 280 aa28.29■■■□□ 2.12
CHRNE-202ENST00000572438 FER1L4A9Z1Z3 1794 aa28.29■■■□□ 2.12
CHRNE-202ENST00000572438 SBNO2Q9Y2G9 1366 aa28.27■■■□□ 2.12
CHRNE-202ENST00000572438 TRAK1Q9UPV9 953 aa28.27■■■□□ 2.12
CHRNE-202ENST00000572438 KDM5AP29375 1690 aaKnown RBP28.26■■■□□ 2.12
CHRNE-202ENST00000572438 CENPJQ9HC77 1338 aaPredicted RBP28.26■■■□□ 2.11
CHRNE-202ENST00000572438 CEBPAP49715 358 aaPredicted RBP28.25■■■□□ 2.11
CHRNE-202ENST00000572438 NLRP1Q9C000 1473 aa28.25■■■□□ 2.11
CHRNE-202ENST00000572438 C3P01024 1663 aa28.25■■■□□ 2.11
CHRNE-202ENST00000572438 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.23■■■□□ 2.11
CHRNE-202ENST00000572438 ASXL1Q8IXJ9 1541 aa28.23■■■□□ 2.11
CHRNE-202ENST00000572438 ALKQ9UM73 1620 aa28.21■■■□□ 2.11
CHRNE-202ENST00000572438 UBR1Q8IWV7 1749 aa28.19■■■□□ 2.1
CHRNE-202ENST00000572438 HDGFP51858 240 aaKnown RBP28.19■■■□□ 2.1
CHRNE-202ENST00000572438 SENP3Q9H4L4 574 aaPredicted RBP28.17■■■□□ 2.1
CHRNE-202ENST00000572438 TMEM2Q9UHN6 1383 aa28.17■■■□□ 2.1
CHRNE-202ENST00000572438 QRICH2Q9H0J4 1663 aa28.16■■■□□ 2.1
CHRNE-202ENST00000572438 ARHGEF28Q8N1W1 1705 aaKnown RBP28.16■■■□□ 2.1
CHRNE-202ENST00000572438 PANK3Q9H999 370 aa28.15■■■□□ 2.1
CHRNE-202ENST00000572438 PER1O15534 1290 aaPredicted RBP28.15■■■□□ 2.1
CHRNE-202ENST00000572438 ADAMTSL3P82987 1691 aa28.15■■■□□ 2.1
CHRNE-202ENST00000572438 YTHDC2Q9H6S0 1430 aaKnown RBP28.14■■■□□ 2.1
CHRNE-202ENST00000572438 KTN1Q86UP2 1357 aaKnown RBP28.13■■■□□ 2.09
CHRNE-202ENST00000572438 PTPRMP28827 1452 aa28.11■■■□□ 2.09
CHRNE-202ENST00000572438 PLPPR3Q6T4P5 718 aa28.11■■■□□ 2.09
CHRNE-202ENST00000572438 STK26Q9P289 416 aa28.11■■■□□ 2.09
CHRNE-202ENST00000572438 NRXN3Q9Y4C0 1643 aa28.09■■■□□ 2.09
CHRNE-202ENST00000572438 MYOM1P52179 1685 aa28.08■■■□□ 2.09
CHRNE-202ENST00000572438 SETD1AO15047 1707 aaKnown RBP28.08■■■□□ 2.09
CHRNE-202ENST00000572438 RIMS1Q86UR5 1692 aaKnown RBP28.08■■■□□ 2.09
CHRNE-202ENST00000572438 CNGB1Q14028 1251 aaPredicted RBP28.08■■■□□ 2.09
CHRNE-202ENST00000572438 RALBP1Q15311 655 aa28.08■■■□□ 2.09
CHRNE-202ENST00000572438 CCDC184Q52MB2 194 aa28.07■■■□□ 2.08
CHRNE-202ENST00000572438 MRS2Q9HD23 443 aa28.06■■■□□ 2.08
CHRNE-202ENST00000572438 LRPPRCP42704 1394 aaKnown RBP28.04■■■□□ 2.08
CHRNE-202ENST00000572438 PUS7Q96PZ0 661 aaKnown RBP28.03■■■□□ 2.08
CHRNE-202ENST00000572438 EVC2Q86UK5 1308 aa28.03■■■□□ 2.08
CHRNE-202ENST00000572438 SLIT1O75093 1534 aa28.03■■■□□ 2.08
CHRNE-202ENST00000572438 DLC1Q96QB1 1528 aa28.03■■■□□ 2.08
CHRNE-202ENST00000572438 PARD3Q8TEW0 1356 aa28.02■■■□□ 2.08
CHRNE-202ENST00000572438 ARHGAP23Q9P227 1491 aa28.02■■■□□ 2.08
CHRNE-202ENST00000572438 KDM4FA0A1W2PPD8 638 aa28.02■■■□□ 2.08
CHRNE-202ENST00000572438 PRAM1Q96QH2 718 aa28.02■■■□□ 2.08
CHRNE-202ENST00000572438 TULP4Q9NRJ4 1543 aa28.01■■■□□ 2.07
CHRNE-202ENST00000572438 PLEKHG1Q9ULL1 1385 aa28.01■■■□□ 2.07
CHRNE-202ENST00000572438 MYBBP1AQ9BQG0 1328 aaKnown RBP28■■■□□ 2.07
CHRNE-202ENST00000572438 ABCC11Q96J66 1382 aa28■■■□□ 2.07
CHRNE-202ENST00000572438 LTKP29376 864 aa27.99■■■□□ 2.07
CHRNE-202ENST00000572438 THEMISQ8N1K5 641 aaPredicted RBP27.99■■■□□ 2.07
CHRNE-202ENST00000572438 POGKQ9P215 609 aa27.99■■■□□ 2.07
CHRNE-202ENST00000572438 KNSTRNQ9Y448 316 aa27.99■■■□□ 2.07
CHRNE-202ENST00000572438 TXNDC2Q86VQ3 553 aa27.99■■■□□ 2.07
CHRNE-202ENST00000572438 EID1Q9Y6B2 187 aa27.99■■■□□ 2.07
CHRNE-202ENST00000572438 METP08581 1390 aa27.99■■■□□ 2.07
CHRNE-202ENST00000572438 SAFB2Q14151 953 aaKnown RBP eCLIP27.98■■■□□ 2.07
CHRNE-202ENST00000572438 BCANQ96GW7 911 aa27.97■■■□□ 2.07
CHRNE-202ENST00000572438 ADAMTS13Q76LX8 1427 aa27.95■■■□□ 2.07
CHRNE-202ENST00000572438 CC2D1BQ5T0F9 858 aaKnown RBP27.95■■■□□ 2.07
CHRNE-202ENST00000572438 CEP170BQ9Y4F5 1589 aaPredicted RBP27.94■■■□□ 2.06
CHRNE-202ENST00000572438 AMER1Q5JTC6 1135 aaPredicted RBP27.93■■■□□ 2.06
CHRNE-202ENST00000572438 BRD4O60885 1362 aaPredicted RBP27.93■■■□□ 2.06
CHRNE-202ENST00000572438 NPC1L1Q9UHC9 1359 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms