RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 AGLP35573 1532 aa12.34□□□□□ -0.43
TVP23A-205ENST00000572428 ZC3H13Q5T200 1668 aaKnown RBP12.33□□□□□ -0.44
TVP23A-205ENST00000572428 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.33□□□□□ -0.44
TVP23A-205ENST00000572428 SIGLEC1Q9BZZ2 1709 aa12.33□□□□□ -0.44
TVP23A-205ENST00000572428 TET3O43151 1660 aa12.33□□□□□ -0.44
TVP23A-205ENST00000572428 FAM135AQ9P2D6 1515 aa12.32□□□□□ -0.44
TVP23A-205ENST00000572428 LMTK2Q8IWU2 1503 aa12.32□□□□□ -0.44
TVP23A-205ENST00000572428 KCNG1Q9UIX4 513 aa12.31□□□□□ -0.44
TVP23A-205ENST00000572428 ATP10AO60312 1499 aa12.3□□□□□ -0.44
TVP23A-205ENST00000572428 PUS7Q96PZ0 661 aaKnown RBP12.3□□□□□ -0.44
TVP23A-205ENST00000572428 RAPGEF3O95398 923 aa12.3□□□□□ -0.44
TVP23A-205ENST00000572428 E9PCH4 1651 aa12.3□□□□□ -0.44
TVP23A-205ENST00000572428 YEATS2Q9ULM3 1422 aa12.29□□□□□ -0.44
TVP23A-205ENST00000572428 CEP152O94986 1710 aa12.29□□□□□ -0.44
TVP23A-205ENST00000572428 TICAM2Q86XR7 235 aa12.28□□□□□ -0.44
TVP23A-205ENST00000572428 YTHDC1Q96MU7 727 aaKnown RBP12.28□□□□□ -0.44
TVP23A-205ENST00000572428 ZNF316A6NFI3 1004 aaPredicted RBP12.26□□□□□ -0.45
TVP23A-205ENST00000572428 MPHOSPH9Q99550 1183 aa12.26□□□□□ -0.45
TVP23A-205ENST00000572428 SPHKAPQ2M3C7 1700 aa12.26□□□□□ -0.45
TVP23A-205ENST00000572428 CAMSAP1Q5T5Y3 1602 aa12.26□□□□□ -0.45
TVP23A-205ENST00000572428 CHRM1P11229 460 aaPredicted RBP12.25□□□□□ -0.45
TVP23A-205ENST00000572428 EFCAB6Q5THR3 1501 aa12.25□□□□□ -0.45
TVP23A-205ENST00000572428 NUP155O75694 1391 aa12.24□□□□□ -0.45
TVP23A-205ENST00000572428 ANKRD30BQ9BXX2 1392 aa12.24□□□□□ -0.45
TVP23A-205ENST00000572428 TEX2Q8IWB9 1127 aa12.24□□□□□ -0.45
TVP23A-205ENST00000572428 IPO4Q8TEX9 1081 aaKnown RBP12.23□□□□□ -0.45
TVP23A-205ENST00000572428 ABCC3O15438 1527 aa12.23□□□□□ -0.45
TVP23A-205ENST00000572428 NEURL4Q96JN8 1562 aa12.23□□□□□ -0.45
TVP23A-205ENST00000572428 C1orf115Q9H7X2 142 aa12.22□□□□□ -0.45
TVP23A-205ENST00000572428 NCLP19338 710 aaKnown RBP12.22□□□□□ -0.45
TVP23A-205ENST00000572428 DIEXFQ68CQ4 756 aaKnown RBP12.22□□□□□ -0.45
TVP23A-205ENST00000572428 RPRD2Q5VT52 1461 aaKnown RBP12.22□□□□□ -0.45
TVP23A-205ENST00000572428 MROH2AA6NES4 1674 aa12.22□□□□□ -0.45
TVP23A-205ENST00000572428 FOXD1Q16676 465 aa12.21□□□□□ -0.45
TVP23A-205ENST00000572428 TRIM52Q96A61 297 aa12.21□□□□□ -0.45
TVP23A-205ENST00000572428 IL27Q8NEV9 243 aa12.21□□□□□ -0.46
TVP23A-205ENST00000572428 ZNF692Q9BU19 519 aaPredicted RBP12.21□□□□□ -0.46
TVP23A-205ENST00000572428 RNF216Q9NWF9 866 aaPredicted RBP12.21□□□□□ -0.46
TVP23A-205ENST00000572428 TRPM2O94759 1503 aa12.2□□□□□ -0.46
TVP23A-205ENST00000572428 PTPRTO14522 1441 aa12.2□□□□□ -0.46
TVP23A-205ENST00000572428 BBXQ8WY36 941 aaPredicted RBP12.2□□□□□ -0.46
TVP23A-205ENST00000572428 ARHGAP31Q2M1Z3 1444 aa12.2□□□□□ -0.46
TVP23A-205ENST00000572428 KANK1Q14678 1352 aa12.19□□□□□ -0.46
TVP23A-205ENST00000572428 PLA2R1Q13018 1463 aa12.19□□□□□ -0.46
TVP23A-205ENST00000572428 HMGB1P09429 215 aaKnown RBP12.19□□□□□ -0.46
TVP23A-205ENST00000572428 WWC1Q8IX03 1113 aa12.18□□□□□ -0.46
TVP23A-205ENST00000572428 CLTCQ00610 1675 aaKnown RBP12.18□□□□□ -0.46
TVP23A-205ENST00000572428 PIK3C2BO00750 1634 aa12.18□□□□□ -0.46
TVP23A-205ENST00000572428 KIF3BO15066 747 aa12.18□□□□□ -0.46
TVP23A-205ENST00000572428 GTF2E1P29083 439 aaPredicted RBP12.18□□□□□ -0.46
TVP23A-205ENST00000572428 NBR1Q14596 966 aa12.17□□□□□ -0.46
TVP23A-205ENST00000572428 PREX1Q8TCU6 1659 aa12.17□□□□□ -0.46
TVP23A-205ENST00000572428 FAM43BQ6ZT52 329 aaPredicted RBP12.16□□□□□ -0.46
TVP23A-205ENST00000572428 PKD2Q13563 968 aa12.15□□□□□ -0.46
TVP23A-205ENST00000572428 CERS3Q8IU89 383 aa12.15□□□□□ -0.46
TVP23A-205ENST00000572428 KIF1BO60333 1816 aa12.15□□□□□ -0.46
TVP23A-205ENST00000572428 PRDM16Q9HAZ2 1276 aa12.15□□□□□ -0.46
TVP23A-205ENST00000572428 CLTCL1P53675 1640 aa12.15□□□□□ -0.46
TVP23A-205ENST00000572428 IFT172Q9UG01 1749 aa12.14□□□□□ -0.47
TVP23A-205ENST00000572428 FER1L4A9Z1Z3 1794 aa12.13□□□□□ -0.47
TVP23A-205ENST00000572428 CWC22Q9HCG8 908 aaKnown RBP12.13□□□□□ -0.47
TVP23A-205ENST00000572428 NPATQ14207 1427 aa12.13□□□□□ -0.47
TVP23A-205ENST00000572428 PIAS4Q8N2W9 510 aaPredicted RBP12.13□□□□□ -0.47
TVP23A-205ENST00000572428 NOS1P29475 1434 aa12.13□□□□□ -0.47
TVP23A-205ENST00000572428 SYNMO15061 1565 aa12.12□□□□□ -0.47
TVP23A-205ENST00000572428 SPATA31D1Q6ZQQ2 1576 aa12.12□□□□□ -0.47
TVP23A-205ENST00000572428 KDM5AP29375 1690 aaKnown RBP12.11□□□□□ -0.47
TVP23A-205ENST00000572428 ADAMTSL3P82987 1691 aa12.11□□□□□ -0.47
TVP23A-205ENST00000572428 CNTLNQ9NXG0 1405 aa12.11□□□□□ -0.47
TVP23A-205ENST00000572428 FOXD4L5Q5VV16 416 aaPredicted RBP12.11□□□□□ -0.47
TVP23A-205ENST00000572428 FOXD4L4Q8WXT5 416 aaPredicted RBP12.11□□□□□ -0.47
TVP23A-205ENST00000572428 SIN3AQ96ST3 1273 aa12.11□□□□□ -0.47
TVP23A-205ENST00000572428 CFAP65Q6ZU64 1925 aaKnown RBP12.1□□□□□ -0.47
TVP23A-205ENST00000572428 FTSJ3Q8IY81 847 aaKnown RBP12.1□□□□□ -0.47
TVP23A-205ENST00000572428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.1□□□□□ -0.47
TVP23A-205ENST00000572428 C3P01024 1663 aa12.09□□□□□ -0.47
TVP23A-205ENST00000572428 SPATA31E1Q6ZUB1 1445 aa12.08□□□□□ -0.48
TVP23A-205ENST00000572428 ZNF526Q8TF50 670 aaPredicted RBP12.08□□□□□ -0.48
TVP23A-205ENST00000572428 CCDC144AA2RUR9 1427 aa12.08□□□□□ -0.48
TVP23A-205ENST00000572428 ADGRB3O60242 1522 aa12.08□□□□□ -0.48
TVP23A-205ENST00000572428 CLSTN1O94985 981 aa12.08□□□□□ -0.48
TVP23A-205ENST00000572428 PPLO60437 1756 aa12.07□□□□□ -0.48
TVP23A-205ENST00000572428 WASHC2CQ9Y4E1 1318 aa12.07□□□□□ -0.48
TVP23A-205ENST00000572428 GGT6Q6P531 493 aa12.06□□□□□ -0.48
TVP23A-205ENST00000572428 ERVK-7P63135 1459 aa12.06□□□□□ -0.48
TVP23A-205ENST00000572428 MYO5BQ9ULV0 1848 aa12.06□□□□□ -0.48
TVP23A-205ENST00000572428 UHRF1BP1Q6BDS2 1440 aa12.06□□□□□ -0.48
TVP23A-205ENST00000572428 TMEM131LA2VDJ0 1609 aa12.05□□□□□ -0.48
TVP23A-205ENST00000572428 KIAA1210Q9ULL0 1709 aa12.05□□□□□ -0.48
TVP23A-205ENST00000572428 TONSLQ96HA7 1378 aa12.05□□□□□ -0.48
TVP23A-205ENST00000572428 PPP1R15AO75807 674 aaPredicted RBP12.04□□□□□ -0.48
TVP23A-205ENST00000572428 UGGT1Q9NYU2 1555 aa12.04□□□□□ -0.48
TVP23A-205ENST00000572428 STAC3Q96MF2 364 aa12.04□□□□□ -0.48
TVP23A-205ENST00000572428 PSMD1Q99460 953 aa12.03□□□□□ -0.48
TVP23A-205ENST00000572428 LAMC1P11047 1609 aa12.03□□□□□ -0.48
TVP23A-205ENST00000572428 TRPM1Q7Z4N2 1603 aa12.03□□□□□ -0.48
TVP23A-205ENST00000572428 MADDQ8WXG6 1647 aa12.03□□□□□ -0.48
TVP23A-205ENST00000572428 RIMS1Q86UR5 1692 aaKnown RBP12.01□□□□□ -0.49
TVP23A-205ENST00000572428 MYOM2P54296 1465 aa12.01□□□□□ -0.49
TVP23A-205ENST00000572428 NRXN1Q9ULB1 1477 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms